Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003933
CDS Infomation

pacid=37456452 polypeptide=PGSC0003DMP400002800 locus=PGSC0003DMG400001549 ID=PGSC0003DMT400003933.v4.03 annot-version=v4.03
Sequence

ATGGCAATGAGTCTGCCACACCAGATCGGTGCCTTATCAGGAACATCGCTCACGGCGGAA
ACCGGTGGAGTTTCATGCGAAGTTCCGGCGAAGGGGAGTTCAGCTACATCAGCTATGTGG
AGAACACCGATGACGAATTTAAAAGTATCGGTACAAAAAACAGGAGCTGAAATTGACAGG
GTGTCGCCGTCGCCGTCGCCGCCGATGAGTCCGATGATGGGAGGAGGAATGCGGCCGGAT
TTATTAGCGTGTCAAGCGTTGATGGAAGCTCAGGTAGATGAGGTAGTTGAGAGAGAATAT
AAGGTTAGGAATTCGTCGGAGAAAGAGAAAGGAGTTCCGGTGTTTGTTATGATGCCGTTG
GATAGTGTGAAAATGGATCATACTGTGAATAGGAAGAAGGCGATGAATGCGAGTTTACAG
GCGTTGAAGAGCGCCGGTGTGGAAGGGATTATGATGGATGTGTGGTGGGGATTGGTGGAG
AGAGATGCGCCGGGAGAGTATAATTGGGGCGGTTATGCTGAGCTTATGGAAATGGCGAAA
AAACATGGACTCAAAGTTCAAGCTGTGATGTCTTTCCATCAATGTGGTGGAAACGTCGGT
GATTCCTGCACGATCCCTCTTCCAAGGTGGGTTGTTGAGGAGATGGAGAAGGATTCAGAT
CTTGCATACACAGATCAGTGGGGAAGGAGGAATTTTGAATATGTATCGCTTGGTTGCGAT
ACACTTCCAGTTCTTAAAGGAAGGACTCCTGTCCAATGCTATTCTGATTTCATGAGAGGG
TTTAGAGATAGATTTGAGAATCTCCTAGGTGACACCATTGTGGAAATTCAAGTCGGGATG
GGTCCAGCTGGAGAGCTCCGTTATCCATCCTATCCGGAAAAAGATGGAGTATGGAAATTC
CCTGGAATTGGTGCTTTTCAGTGTTATGACAAGTACATGATCAGTAGCTTACAGGGTGCA
GCAGAAGCTTTTGGTAAGCCTGAATGGGGACACACCGGTCCAACCGATGCTGGTCAGTAC
AACAATTGGCCAGAAGATACCAACTTTTTCAAGAAGGAAGGTGGTGGATGGGATAGTCAA
TATGGGGAGTTCTTCCTCACTTGGTATTCTGAGATGCTTTTGAACCATGGTGAGAGGATA
CTGCAATCAGCCAAGGCGATATTCGAGGACAAGGGTGTTAAGATTTCAGTTAAGATTGCA
GGTATTCACTGGCACTATGGAACAAGGTCCCATGCCCCTGAGCTGACCGCTGGATACTAC
AACACCCGTAACCGAGATGGTTACCTTCCCATCGCCCAGATGCTTGCCCGCCACGGTGCA
GTTTTCAACTTCACATGTGTTGAGATGCGTGACCACGAGCAGCCACAAGATGCCCAATGT
GCACCTGAGAAGTTGGTTAGGCAAGTGGCATTAGCAACTCAGGAAGCTCAAGTTCCACTT
GCTGGGGAGAATGCATTGCCACGATACGATGATTATGCACATGAACAGATCCTTCAAGCA
TCCTCATTGAATATCAACGATCAATCAGGTGATAGAGAGATGTGCGCGTTTACATATTTG
AGGATGAATCCTGACCTATTCCATCCTGATAACTGGAGACGATTCGTTGCCTTTGTGAAG
AAAATGAAAGAAGGAAAAGACGCTAACAAATGCCGGGAACAAGTAGAGAGGGAGGCAGAG
CATTTCGTGCATATAACTCAGCCGTTAGTGCAAGAAGCTGCAGCAGCCCTCATGCACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002800
PEP Infomation

pacid=37456452 transcript=PGSC0003DMT400003933 locus=PGSC0003DMG400001549 ID=PGSC0003DMT400003933.v4.03 annot-version=v4.03
Sequence

MAMSLPHQIGALSGTSLTAETGGVSCEVPAKGSSATSAMWRTPMTNLKVSVQKTGAEIDR
VSPSPSPPMSPMMGGGMRPDLLACQALMEAQVDEVVEREYKVRNSSEKEKGVPVFVMMPL
DSVKMDHTVNRKKAMNASLQALKSAGVEGIMMDVWWGLVERDAPGEYNWGGYAELMEMAK
KHGLKVQAVMSFHQCGGNVGDSCTIPLPRWVVEEMEKDSDLAYTDQWGRRNFEYVSLGCD
TLPVLKGRTPVQCYSDFMRGFRDRFENLLGDTIVEIQVGMGPAGELRYPSYPEKDGVWKF
PGIGAFQCYDKYMISSLQGAAEAFGKPEWGHTGPTDAGQYNNWPEDTNFFKKEGGGWDSQ
YGEFFLTWYSEMLLNHGERILQSAKAIFEDKGVKISVKIAGIHWHYGTRSHAPELTAGYY
NTRNRDGYLPIAQMLARHGAVFNFTCVEMRDHEQPQDAQCAPEKLVRQVALATQEAQVPL
AGENALPRYDDYAHEQILQASSLNINDQSGDREMCAFTYLRMNPDLFHPDNWRRFVAFVK
KMKEGKDANKCREQVEREAEHFVHITQPLVQEAAAALMH*

Transcript Sequence

Transcript ID

PGSC0003DMT400003933
Transcript Infomation

pacid=37456452 locus=PGSC0003DMG400001549 ID=PGSC0003DMT400003933.v4.03 annot-version=v4.03
Sequence

ATGGCAATGAGTCTGCCACACCAGATCGGTGCCTTATCAGGAACATCGCTCACGGCGGAA
ACCGGTGGAGTTTCATGCGAAGTTCCGGCGAAGGGGAGTTCAGCTACATCAGCTATGTGG
AGAACACCGATGACGAATTTAAAAGTATCGGTACAAAAAACAGGAGCTGAAATTGACAGG
GTGTCGCCGTCGCCGTCGCCGCCGATGAGTCCGATGATGGGAGGAGGAATGCGGCCGGAT
TTATTAGCGTGTCAAGCGTTGATGGAAGCTCAGGTAGATGAGGTAGTTGAGAGAGAATAT
AAGGTTAGGAATTCGTCGGAGAAAGAGAAAGGAGTTCCGGTGTTTGTTATGATGCCGTTG
GATAGTGTGAAAATGGATCATACTGTGAATAGGAAGAAGGCGATGAATGCGAGTTTACAG
GCGTTGAAGAGCGCCGGTGTGGAAGGGATTATGATGGATGTGTGGTGGGGATTGGTGGAG
AGAGATGCGCCGGGAGAGTATAATTGGGGCGGTTATGCTGAGCTTATGGAAATGGCGAAA
AAACATGGACTCAAAGTTCAAGCTGTGATGTCTTTCCATCAATGTGGTGGAAACGTCGGT
GATTCCTGCACGATCCCTCTTCCAAGGTGGGTTGTTGAGGAGATGGAGAAGGATTCAGAT
CTTGCATACACAGATCAGTGGGGAAGGAGGAATTTTGAATATGTATCGCTTGGTTGCGAT
ACACTTCCAGTTCTTAAAGGAAGGACTCCTGTCCAATGCTATTCTGATTTCATGAGAGGG
TTTAGAGATAGATTTGAGAATCTCCTAGGTGACACCATTGTGGAAATTCAAGTCGGGATG
GGTCCAGCTGGAGAGCTCCGTTATCCATCCTATCCGGAAAAAGATGGAGTATGGAAATTC
CCTGGAATTGGTGCTTTTCAGTGTTATGACAAGTACATGATCAGTAGCTTACAGGGTGCA
GCAGAAGCTTTTGGTAAGCCTGAATGGGGACACACCGGTCCAACCGATGCTGGTCAGTAC
AACAATTGGCCAGAAGATACCAACTTTTTCAAGAAGGAAGGTGGTGGATGGGATAGTCAA
TATGGGGAGTTCTTCCTCACTTGGTATTCTGAGATGCTTTTGAACCATGGTGAGAGGATA
CTGCAATCAGCCAAGGCGATATTCGAGGACAAGGGTGTTAAGATTTCAGTTAAGATTGCA
GGTATTCACTGGCACTATGGAACAAGGTCCCATGCCCCTGAGCTGACCGCTGGATACTAC
AACACCCGTAACCGAGATGGTTACCTTCCCATCGCCCAGATGCTTGCCCGCCACGGTGCA
GTTTTCAACTTCACATGTGTTGAGATGCGTGACCACGAGCAGCCACAAGATGCCCAATGT
GCACCTGAGAAGTTGGTTAGGCAAGTGGCATTAGCAACTCAGGAAGCTCAAGTTCCACTT
GCTGGGGAGAATGCATTGCCACGATACGATGATTATGCACATGAACAGATCCTTCAAGCA
TCCTCATTGAATATCAACGATCAATCAGGTGATAGAGAGATGTGCGCGTTTACATATTTG
AGGATGAATCCTGACCTATTCCATCCTGATAACTGGAGACGATTCGTTGCCTTTGTGAAG
AAAATGAAAGAAGGAAAAGACGCTAACAAATGCCGGGAACAAGTAGAGAGGGAGGCAGAG
CATTTCGTGCATATAACTCAGCCGTTAGTGCAAGAAGCTGCAGCAGCCCTCATGCACTAA