Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003908
CDS Infomation

pacid=37425508 polypeptide=PGSC0003DMP400002779 locus=PGSC0003DMG400001544 ID=PGSC0003DMT400003908.v4.03 annot-version=v4.03
Sequence

ATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCT
CTCTTCTGCAGAACCTTCAATTCTTCTAAATGCAAGACAATGGCAAAGATGACGGTGGCG
AGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGAGGCAAATGAGGAGAGACATT
GCTATGCTTCTTGAATCCCGTCAGGATGCCACTGCTCGTATTCGGGTCGAACATGTAATA
AGGGAACAAAATATATTGCAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTAATTGTG
GCTAGACTAACAATTATTGCAAAGCAAAAGCAATGTCCAGCTGATTTGAAAGAGGGGATA
TCAAGTTTGATTTTTGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATTAAA
GACGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCC
AACGCTGGTGTAAACCGGACGCTCATTGAAAAGCTCTCTGTGAAAACTCCAAGTGGTGAA
GTCAAACTAAAAATCATGAAAGAAATAGCCAAGGAATACCAGGTTGAATGGGACACCGTA
GATTCAGAGATGGAGCTTCTCAAGCCACCAGAAGAGCGTATAGAAGGACCAAATGGCTTT
GTAAGTGCCACTAGCTTACCCCTGAAGCCGACCTCAAAGCAACCTGCTGAGCCTAACAAC
CTCCCAAGGGCTTCAGATGACGGAGAATTGAAAGTTGCCAAATTTGATGACCCAGCTTCA
GCTGCTAAAGCAGCTGCTGAATCTGCCAAGCAAGCAATTGCTGCAGCCGAAGCAGCTGCA
TATCTTGCCAGTAAAGATGCAAAAGCATCTTCTGCTGGTTGTCACAACTCTAGGAACAAT
GCAACTGTTGACAATATCCCTTTCATTTCTGGTGCTCAGGCTCCCAAGTTCTCGCAAAAT
GAAGTGGCACCACCTTCTCAGTCCATAGTTGATCTGTATGATATGCACTGGAGTAGTAAG
AACATCAGGAATTCTGAAAATTCGCATAGTTCTGCTGGTGAAGAGATGCCATTAGATATG
AAAAGATCACAGAAGTTTGATAGGAGACATAGCTATAATGTTCCATCCTCAAATCGTAAT
GTTCAGTATGATGATTCAGATTGCGACGAGGAAATCGAGATGGAAGATCCCCCAAGTGGG
ACATATAAACCCAGCCCACCAACTGATACTGATGGTGGGAAGTTCTACAGAAGGCACAGC
TACAATGTTCCATCAGCACATTCAGGTATCAAGTTTGATGAATCAGATGGCGAAGAAGAG
ATGGAAACTCAAGAATTCACTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCAT
GTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAGCTTACTGCTCGCTTCGAGTCT
CTCAAGTCCCAGAAATCTCGTCGTACCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400002779
PEP Infomation

pacid=37425508 transcript=PGSC0003DMT400003908 locus=PGSC0003DMG400001544 ID=PGSC0003DMT400003908.v4.03 annot-version=v4.03
Sequence

MTVANAATKHCKKAMKMGLSLFCRTFNSSKCKTMAKMTVARIKLLRNKREVVVRQMRRDI
AMLLESRQDATARIRVEHVIREQNILQANEILELFCELIVARLTIIAKQKQCPADLKEGI
SSLIFAAPRCSDIPELMGIKDVFEKKYGKDFVSAATDLRPNAGVNRTLIEKLSVKTPSGE
VKLKIMKEIAKEYQVEWDTVDSEMELLKPPEERIEGPNGFVSATSLPLKPTSKQPAEPNN
LPRASDDGELKVAKFDDPASAAKAAAESAKQAIAAAEAAAYLASKDAKASSAGCHNSRNN
ATVDNIPFISGAQAPKFSQNEVAPPSQSIVDLYDMHWSSKNIRNSENSHSSAGEEMPLDM
KRSQKFDRRHSYNVPSSNRNVQYDDSDCDEEIEMEDPPSGTYKPSPPTDTDGGKFYRRHS
YNVPSAHSGIKFDESDGEEEMETQEFTRGTNRAPNRPAPHVPRVHPNLPDYDKLTARFES
LKSQKSRRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400003908
Transcript Infomation

pacid=37425508 locus=PGSC0003DMG400001544 ID=PGSC0003DMT400003908.v4.03 annot-version=v4.03
Sequence

ATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCT
CTCTTCTGCAGAACCTTCAATTCTTCTAAATGCAAGACAATGGCAAAGATGACGGTGGCG
AGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGAGGCAAATGAGGAGAGACATT
GCTATGCTTCTTGAATCCCGTCAGGATGCCACTGCTCGTATTCGGGTCGAACATGTAATA
AGGGAACAAAATATATTGCAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTAATTGTG
GCTAGACTAACAATTATTGCAAAGCAAAAGCAATGTCCAGCTGATTTGAAAGAGGGGATA
TCAAGTTTGATTTTTGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATTAAA
GACGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCC
AACGCTGGTGTAAACCGGACGCTCATTGAAAAGCTCTCTGTGAAAACTCCAAGTGGTGAA
GTCAAACTAAAAATCATGAAAGAAATAGCCAAGGAATACCAGGTTGAATGGGACACCGTA
GATTCAGAGATGGAGCTTCTCAAGCCACCAGAAGAGCGTATAGAAGGACCAAATGGCTTT
GTAAGTGCCACTAGCTTACCCCTGAAGCCGACCTCAAAGCAACCTGCTGAGCCTAACAAC
CTCCCAAGGGCTTCAGATGACGGAGAATTGAAAGTTGCCAAATTTGATGACCCAGCTTCA
GCTGCTAAAGCAGCTGCTGAATCTGCCAAGCAAGCAATTGCTGCAGCCGAAGCAGCTGCA
TATCTTGCCAGTAAAGATGCAAAAGCATCTTCTGCTGGTTGTCACAACTCTAGGAACAAT
GCAACTGTTGACAATATCCCTTTCATTTCTGGTGCTCAGGCTCCCAAGTTCTCGCAAAAT
GAAGTGGCACCACCTTCTCAGTCCATAGTTGATCTGTATGATATGCACTGGAGTAGTAAG
AACATCAGGAATTCTGAAAATTCGCATAGTTCTGCTGGTGAAGAGATGCCATTAGATATG
AAAAGATCACAGAAGTTTGATAGGAGACATAGCTATAATGTTCCATCCTCAAATCGTAAT
GTTCAGTATGATGATTCAGATTGCGACGAGGAAATCGAGATGGAAGATCCCCCAAGTGGG
ACATATAAACCCAGCCCACCAACTGATACTGATGGTGGGAAGTTCTACAGAAGGCACAGC
TACAATGTTCCATCAGCACATTCAGGTATCAAGTTTGATGAATCAGATGGCGAAGAAGAG
ATGGAAACTCAAGAATTCACTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCAT
GTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAGCTTACTGCTCGCTTCGAGTCT
CTCAAGTCCCAGAAATCTCGTCGTACCTAG