Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003898
CDS Infomation

pacid=37427540 polypeptide=PGSC0003DMP400002773 locus=PGSC0003DMG400001538 ID=PGSC0003DMT400003898.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTCTTGCTTGTTCAAAAACCAAGCCTTTTCGATCGATCAGTTTGCCAAACAGA
TCACACCCCACAACTCAGAGAGTTGAAGAGGTGCTGAATAAGCTTAATAATGGATTGGAG
ACATCAGTTGTTGCACCAACATGGGAGACAATTTGTAACAGTTTGCTTGGGTTGGAGGAG
TTACAGAAGTGCACGGATGATCTTCTTAAATTGCCTCAAACCTTTCGGATCATATCCCAA
CGCCAACATGTTAAATGGTTTGAGGAGTTATTGGGAAACTCGGTTAGGATTCTTGATATT
TGTGGCACTATAAAGGAATTCGTCTCTCAGTATAAGGAAAATGTAAGAGCTCTTCAATCT
TCACTCAGAAGACGAAAAGGAGATTCAAGTGCAGAAGCTGGAATTGCAAGATTCACCAGT
TTCAGCAAGAAAATGAAGAAGGACGCCAAAAGATTAGTCTTGTCCTTGAAGCAATTAGTG
GATTGTGAGACTCTCACCGCAACAATATTCCTGGAAGCAGATCAGGAGACAATAGCTGTG
ATTAGAGCACTAAGGGAAGCCAATGCAGTTTGCATTTTGATTTTCCATATGCTCTTGTCC
TTGTTGTCTGTGCCACTTTTGAAGCCCAAGCAGCCAAAATGGTCATTGGTTTCAAAACTG
ATACACAACGGAAGAACAGAACACGAAGGCCTAGAAAACAGTACGATCTTGGAAACAAAA
GTGGAGACTTTTGAGGCTCAACTTGACGACATTGAGAAGGGATTAGAAGGAGCATTTAGG
AGCCTGATTAGATCAAGAAGCTCGCTCCTGAATGCTTTCTCCAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002773
PEP Infomation

pacid=37427540 transcript=PGSC0003DMT400003898 locus=PGSC0003DMG400001538 ID=PGSC0003DMT400003898.v4.03 annot-version=v4.03
Sequence

MAALACSKTKPFRSISLPNRSHPTTQRVEEVLNKLNNGLETSVVAPTWETICNSLLGLEE
LQKCTDDLLKLPQTFRIISQRQHVKWFEELLGNSVRILDICGTIKEFVSQYKENVRALQS
SLRRRKGDSSAEAGIARFTSFSKKMKKDAKRLVLSLKQLVDCETLTATIFLEADQETIAV
IRALREANAVCILIFHMLLSLLSVPLLKPKQPKWSLVSKLIHNGRTEHEGLENSTILETK
VETFEAQLDDIEKGLEGAFRSLIRSRSSLLNAFSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400003898
Transcript Infomation

pacid=37427540 locus=PGSC0003DMG400001538 ID=PGSC0003DMT400003898.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTCTTGCTTGTTCAAAAACCAAGCCTTTTCGATCGATCAGTTTGCCAAACAGA
TCACACCCCACAACTCAGAGAGTTGAAGAGGTGCTGAATAAGCTTAATAATGGATTGGAG
ACATCAGTTGTTGCACCAACATGGGAGACAATTTGTAACAGTTTGCTTGGGTTGGAGGAG
TTACAGAAGTGCACGGATGATCTTCTTAAATTGCCTCAAACCTTTCGGATCATATCCCAA
CGCCAACATGTTAAATGGTTTGAGGAGTTATTGGGAAACTCGGTTAGGATTCTTGATATT
TGTGGCACTATAAAGGAATTCGTCTCTCAGTATAAGGAAAATGTAAGAGCTCTTCAATCT
TCACTCAGAAGACGAAAAGGAGATTCAAGTGCAGAAGCTGGAATTGCAAGATTCACCAGT
TTCAGCAAGAAAATGAAGAAGGACGCCAAAAGATTAGTCTTGTCCTTGAAGCAATTAGTG
GATTGTGAGACTCTCACCGCAACAATATTCCTGGAAGCAGATCAGGAGACAATAGCTGTG
ATTAGAGCACTAAGGGAAGCCAATGCAGTTTGCATTTTGATTTTCCATATGCTCTTGTCC
TTGTTGTCTGTGCCACTTTTGAAGCCCAAGCAGCCAAAATGGTCATTGGTTTCAAAACTG
ATACACAACGGAAGAACAGAACACGAAGGCCTAGAAAACAGTACGATCTTGGAAACAAAA
GTGGAGACTTTTGAGGCTCAACTTGACGACATTGAGAAGGGATTAGAAGGAGCATTTAGG
AGCCTGATTAGATCAAGAAGCTCGCTCCTGAATGCTTTCTCCAGCTAA