Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003870
CDS Infomation

pacid=37428884 polypeptide=PGSC0003DMP400002754 locus=PGSC0003DMG400001525 ID=PGSC0003DMT400003870.v4.03 annot-version=v4.03
Sequence

ATGGCTCGGAAATCCTTTCCGATCCTAAAACAACTCATCCAACAATCGACCAATCGTTGT
TTCACCTCTAGCGCTTCGCCGCGAGCCGTCACGCTGATCCCAGGCGATGGCGTCGGTCCA
CTGGTAACCGATTCAGTCGAACAAGTGATGCAGGCGATGAAGGCACCTGTTTACTTTGAG
CGATACGAAGTGCGTGGTGATATGAAGTGTATACCGAAGGAAGTAATTGATTCGATTAAG
AAGAATAAGGTTTGTCTGAAAGGAGGGTTAAAGACTCCGGTTGGCGGAGGTGTTAGTTCG
CTAAATGTGCAAATGAGGAAAGAGCTTGATTTGTACGCTTCCATTGTGCATTGTTTTACT
CTGCCAGGGTTGCCTACGCGGCATGAGGATGTGGATATTGTTGTGATTAGGGAGAACACT
GAGGGAGAGTATGCTGGCCTTGAGCACGAGGTTGTTCCTGGTGTCGTTGAGAGCCTTAAG
GTGATAACAAAATATTGCTCAGAACGAATAGCAAAATTTGCGTTTGAGTATGCTGATGTG
AACAAAAGAAAGAAGGTCACAGCTGTGCACAAAGCCAACATTATGAAACTTGCAGATGGT
CTATTCTTAGAATCCTGTAGGGAAATTGCAGCTAAATATCCAGAAATACAGTATGAGGAG
ATTATTGTGGATAATTGCTGCATGCAACTTGTCTCAAGGCCGGAGCAATTTGATGTCATG
GTGACTCCCAACCTCTATGGAAATTTGATTGCAAATACGGCTGCTGGCATAGCTGGTGGC
ACAGGAGTCATGCCAGGAGGTAATGTTGGCGCCGATCAAGCAGTTTTTGAGCAAGGTGCT
TCAGCTGGGAATGTCGGCAACGAAAAGATATTGAAGCTTAAGAAAGCAAATCCAGTGGCA
CTTCTTCTGTCGTCAGCAATGATGCTGAGACATCTTGAATTTCCGTCATTTGCTGATCGT
TTAGAAACTGCTGTAAGACATGTAATAGAAGAGGGAAAATTCAGGACAAAGGATGTTGGA
GGGGATAGCACCACCCAAGAAGTTGTTGATGCAATTATAGCTGCTTTAGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002754
PEP Infomation

pacid=37428884 transcript=PGSC0003DMT400003870 locus=PGSC0003DMG400001525 ID=PGSC0003DMT400003870.v4.03 annot-version=v4.03
Sequence

MARKSFPILKQLIQQSTNRCFTSSASPRAVTLIPGDGVGPLVTDSVEQVMQAMKAPVYFE
RYEVRGDMKCIPKEVIDSIKKNKVCLKGGLKTPVGGGVSSLNVQMRKELDLYASIVHCFT
LPGLPTRHEDVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKYCSERIAKFAFEYADV
NKRKKVTAVHKANIMKLADGLFLESCREIAAKYPEIQYEEIIVDNCCMQLVSRPEQFDVM
VTPNLYGNLIANTAAGIAGGTGVMPGGNVGADQAVFEQGASAGNVGNEKILKLKKANPVA
LLLSSAMMLRHLEFPSFADRLETAVRHVIEEGKFRTKDVGGDSTTQEVVDAIIAALD*

Transcript Sequence

Transcript ID

PGSC0003DMT400003870
Transcript Infomation

pacid=37428884 locus=PGSC0003DMG400001525 ID=PGSC0003DMT400003870.v4.03 annot-version=v4.03
Sequence

ATGGCTCGGAAATCCTTTCCGATCCTAAAACAACTCATCCAACAATCGACCAATCGTTGT
TTCACCTCTAGCGCTTCGCCGCGAGCCGTCACGCTGATCCCAGGCGATGGCGTCGGTCCA
CTGGTAACCGATTCAGTCGAACAAGTGATGCAGGCGATGAAGGCACCTGTTTACTTTGAG
CGATACGAAGTGCGTGGTGATATGAAGTGTATACCGAAGGAAGTAATTGATTCGATTAAG
AAGAATAAGGTTTGTCTGAAAGGAGGGTTAAAGACTCCGGTTGGCGGAGGTGTTAGTTCG
CTAAATGTGCAAATGAGGAAAGAGCTTGATTTGTACGCTTCCATTGTGCATTGTTTTACT
CTGCCAGGGTTGCCTACGCGGCATGAGGATGTGGATATTGTTGTGATTAGGGAGAACACT
GAGGGAGAGTATGCTGGCCTTGAGCACGAGGTTGTTCCTGGTGTCGTTGAGAGCCTTAAG
GTGATAACAAAATATTGCTCAGAACGAATAGCAAAATTTGCGTTTGAGTATGCTGATGTG
AACAAAAGAAAGAAGGTCACAGCTGTGCACAAAGCCAACATTATGAAACTTGCAGATGGT
CTATTCTTAGAATCCTGTAGGGAAATTGCAGCTAAATATCCAGAAATACAGTATGAGGAG
ATTATTGTGGATAATTGCTGCATGCAACTTGTCTCAAGGCCGGAGCAATTTGATGTCATG
GTGACTCCCAACCTCTATGGAAATTTGATTGCAAATACGGCTGCTGGCATAGCTGGTGGC
ACAGGAGTCATGCCAGGAGGTAATGTTGGCGCCGATCAAGCAGTTTTTGAGCAAGGTGCT
TCAGCTGGGAATGTCGGCAACGAAAAGATATTGAAGCTTAAGAAAGCAAATCCAGTGGCA
CTTCTTCTGTCGTCAGCAATGATGCTGAGACATCTTGAATTTCCGTCATTTGCTGATCGT
TTAGAAACTGCTGTAAGACATGTAATAGAAGAGGGAAAATTCAGGACAAAGGATGTTGGA
GGGGATAGCACCACCCAAGAAGTTGTTGATGCAATTATAGCTGCTTTAGACTAA