Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003853
CDS Infomation

pacid=37428585 polypeptide=PGSC0003DMP400002743 locus=PGSC0003DMG401001521 ID=PGSC0003DMT400003853.v4.03 annot-version=v4.03
Sequence

ATGGATGAAACTACGTCGTATCCTCCTATTGAACCATCCAACTTCGACCTGATAGTGGTC
GGCACCGGTCTGCCGGAGGCCATACTCGCCGCCGCTGCCTCCGCCGCCGGAAAATCAGTC
CTTCACCTTGATCCTAACCCCTCATACGGTAGCCACTATGCCTCGCTTCCACTTCAGGAA
TTCACTACATACATTGAATCTCATTCATCTCAATCCTCCGCCAATTTCCCAATTCCGCAA
TCCGACATGGATTCGGGATTTACTCGGGTCCCTCTCACTACCCGACCGCTCTACTCCTCC
GTTGAAATCACCTCTTACTCTCCGGAACCCTTGGAGCAATCTCGAAAGTTCAACGTTGAT
TTGAGTGGGCCTAGGGTTTTGCTGTGTGCAGATGCTATGATTGATCTAATTTTGAAGTCT
GAGGTGAATCAGTACATGGAGTTCAAGAGCATAGATGGGAGTTTTATCAGTGACGGAGAG
GGCAATTTGGAGAGTGTACCTGACTCGCGCAGCGCAATATTCAAGGATCGGAAACTAAGC
TTTACGGAGAAGAATCAGCTGATGCGATTCTTCAAGCTGGTACAAGGGCATCTTGAGGCT
GCAGCAGCTGCTGATGGTGGGGAGAGTAGCGAAAGTAAGAGCATCTCAGAGCAGGATTTA
GAGAGTCCGTTTGTGGAGTTTTTAAGCAAAATGGGGCTCTCTGCAAAGCTAAAATCGATT
GTTCTATATGCAATAGCTATGGCAGAGTATGATCAAGAGAATGGAGATGTCTGCAAAAGT
GTTCTTAAGACAAAAGATGGTATTGATCGACTGGCCCTTTATCACTCATCCGTTGGCAGG
TTTCCTAATGCGCCCGGTGCTATGATATACCCCATCTATGGTCAAGGGGAACTTCCGCAG
GCCTTTTGTCGTCGTGCTGCAGTCAAAGGATGCATTTATGTTCTTCGGATGCCTGTTAAT
TCTCTCCTTATGGACAAGGCTAGTGGGAGTTACAAGGGTGTTTGCTTGGCTTCTGAACAA
GAATTGTTCAGCCATAAGCTGATATTAGCTCCATCTTTTGTGGTTCAATTACCACTCCCT
CATTCCTCCCCTGATGCTCATGATTTTGGTTCGCGAAATGCAACTGAGAAGCTGGCGAGG
AGTATATGCATCTCAAAGCACTCTTTGAAACTGGATGTAGCCAATTGTCTGGCATTTTTT
CCTCCTAGATCTCTCTTCCCTGAGCAGGTCACAGCAATCCATGTGCTTCAGTTGAGTAGC
AATGTAGCTGTTTGCCCCTCTGGAATGTTTTTGACTTATCTTTCAGCTATATGTGAGGAT
GATGTTCAGGGTAAGAAGCTATTACATGCAGCCATCAATGTGCTGTTTCATGTTCCTGTT
TCTGGAAGTTCTGGGAATAATAATAATTTTGCGGAGGACCAAAGTGAAACAGGGGATGCA
AAGCCTGCTCTACTTTGGAGTGTCTTGTATACTCAGGAACTTGCGAAGTTTCAGGGTGTA
CTAGATAACATCATCCGTACCCCCATGCCAGATGGGAGTCCATATTACCATGATCTTCTG
GGTGCTACTGAAAAGATATTTCAAGAACTGTATTCTGGTGAAGAATTCTTTCCCAAATCA
ACCTCATCCGAGGAGGGTGCTGCCCAAGAGCTCGAGGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400002743
PEP Infomation

pacid=37428585 transcript=PGSC0003DMT400003853 locus=PGSC0003DMG401001521 ID=PGSC0003DMT400003853.v4.03 annot-version=v4.03
Sequence

MDETTSYPPIEPSNFDLIVVGTGLPEAILAAAASAAGKSVLHLDPNPSYGSHYASLPLQE
FTTYIESHSSQSSANFPIPQSDMDSGFTRVPLTTRPLYSSVEITSYSPEPLEQSRKFNVD
LSGPRVLLCADAMIDLILKSEVNQYMEFKSIDGSFISDGEGNLESVPDSRSAIFKDRKLS
FTEKNQLMRFFKLVQGHLEAAAAADGGESSESKSISEQDLESPFVEFLSKMGLSAKLKSI
VLYAIAMAEYDQENGDVCKSVLKTKDGIDRLALYHSSVGRFPNAPGAMIYPIYGQGELPQ
AFCRRAAVKGCIYVLRMPVNSLLMDKASGSYKGVCLASEQELFSHKLILAPSFVVQLPLP
HSSPDAHDFGSRNATEKLARSICISKHSLKLDVANCLAFFPPRSLFPEQVTAIHVLQLSS
NVAVCPSGMFLTYLSAICEDDVQGKKLLHAAINVLFHVPVSGSSGNNNNFAEDQSETGDA
KPALLWSVLYTQELAKFQGVLDNIIRTPMPDGSPYYHDLLGATEKIFQELYSGEEFFPKS
TSSEEGAAQELED*

Transcript Sequence

Transcript ID

PGSC0003DMT400003853
Transcript Infomation

pacid=37428585 locus=PGSC0003DMG401001521 ID=PGSC0003DMT400003853.v4.03 annot-version=v4.03
Sequence

ATGGATGAAACTACGTCGTATCCTCCTATTGAACCATCCAACTTCGACCTGATAGTGGTC
GGCACCGGTCTGCCGGAGGCCATACTCGCCGCCGCTGCCTCCGCCGCCGGAAAATCAGTC
CTTCACCTTGATCCTAACCCCTCATACGGTAGCCACTATGCCTCGCTTCCACTTCAGGAA
TTCACTACATACATTGAATCTCATTCATCTCAATCCTCCGCCAATTTCCCAATTCCGCAA
TCCGACATGGATTCGGGATTTACTCGGGTCCCTCTCACTACCCGACCGCTCTACTCCTCC
GTTGAAATCACCTCTTACTCTCCGGAACCCTTGGAGCAATCTCGAAAGTTCAACGTTGAT
TTGAGTGGGCCTAGGGTTTTGCTGTGTGCAGATGCTATGATTGATCTAATTTTGAAGTCT
GAGGTGAATCAGTACATGGAGTTCAAGAGCATAGATGGGAGTTTTATCAGTGACGGAGAG
GGCAATTTGGAGAGTGTACCTGACTCGCGCAGCGCAATATTCAAGGATCGGAAACTAAGC
TTTACGGAGAAGAATCAGCTGATGCGATTCTTCAAGCTGGTACAAGGGCATCTTGAGGCT
GCAGCAGCTGCTGATGGTGGGGAGAGTAGCGAAAGTAAGAGCATCTCAGAGCAGGATTTA
GAGAGTCCGTTTGTGGAGTTTTTAAGCAAAATGGGGCTCTCTGCAAAGCTAAAATCGATT
GTTCTATATGCAATAGCTATGGCAGAGTATGATCAAGAGAATGGAGATGTCTGCAAAAGT
GTTCTTAAGACAAAAGATGGTATTGATCGACTGGCCCTTTATCACTCATCCGTTGGCAGG
TTTCCTAATGCGCCCGGTGCTATGATATACCCCATCTATGGTCAAGGGGAACTTCCGCAG
GCCTTTTGTCGTCGTGCTGCAGTCAAAGGATGCATTTATGTTCTTCGGATGCCTGTTAAT
TCTCTCCTTATGGACAAGGCTAGTGGGAGTTACAAGGGTGTTTGCTTGGCTTCTGAACAA
GAATTGTTCAGCCATAAGCTGATATTAGCTCCATCTTTTGTGGTTCAATTACCACTCCCT
CATTCCTCCCCTGATGCTCATGATTTTGGTTCGCGAAATGCAACTGAGAAGCTGGCGAGG
AGTATATGCATCTCAAAGCACTCTTTGAAACTGGATGTAGCCAATTGTCTGGCATTTTTT
CCTCCTAGATCTCTCTTCCCTGAGCAGGTCACAGCAATCCATGTGCTTCAGTTGAGTAGC
AATGTAGCTGTTTGCCCCTCTGGAATGTTTTTGACTTATCTTTCAGCTATATGTGAGGAT
GATGTTCAGGGTAAGAAGCTATTACATGCAGCCATCAATGTGCTGTTTCATGTTCCTGTT
TCTGGAAGTTCTGGGAATAATAATAATTTTGCGGAGGACCAAAGTGAAACAGGGGATGCA
AAGCCTGCTCTACTTTGGAGTGTCTTGTATACTCAGGAACTTGCGAAGTTTCAGGGTGTA
CTAGATAACATCATCCGTACCCCCATGCCAGATGGGAGTCCATATTACCATGATCTTCTG
GGTGCTACTGAAAAGATATTTCAAGAACTGTATTCTGGTGAAGAATTCTTTCCCAAATCA
ACCTCATCCGAGGAGGGTGCTGCCCAAGAGCTCGAGGACTAG