Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003820
CDS Infomation

pacid=37428760 polypeptide=PGSC0003DMP400002723 locus=PGSC0003DMG400001514 ID=PGSC0003DMT400003820.v4.03 annot-version=v4.03
Sequence

ATGTCTTGTTCATCGTCGTCGGCGTCGGAGGATGAAGATGAAGGATTCGATTCTTACCGG
AAGGGAGGGTACCATGCCGTGAGAGTCGGCGATTCATTTTCCGGTGGCCGATATATCGCT
CAACGAAAACTCGGATGGGGAGAGTTTTCCACCGTTTGGCTCGCTTATGATACTCAATCA
TCCGGTTTTGTTGCCTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCAGCTCTT
CATGAAATTGAAGTCCTTTCTGCGATTGCCAATGGTGATCAATCTAACAGTAAATATGTT
GTACGGCTTATTGACCATTTTAAGCACACAGGCCCTAATGGACAGCACATATGTATGGTT
TTTGAATTTCTTGGTGATAGCTTATTGCGGCTTATCAAGCATAATCACTATAAGGGCCTT
GAACTGAACAAAGTTAGGGAGATATGCAAATGTGTTTTGACTGGTTTAGATTATTTGCAT
GGGGGGCTTGGAATTGTTCATACAGATTTGAAACCTGAAAATATTCTTTTACTTACCACG
ATTAATGCCACAAAAGATCCCATTAGATCCGGAATGACTCCCATACTTGAAAGGCCTGAG
GGGAACCCTAATGGAGGAGTAACAATGAATATCATTGAGAAAAAGCTAAAGCAAAGGGCA
AGAAGAGCAGCAGCTAGGATATCAGGAAGACGTTCTTCAATGGGTGGGGTAGGAGGGACT
CCAAAATCAAATAGATCTCTTGATGGGATAGACTTGAGGTGCAAGGTTGTGGATTTTGGA
AATGCATGCTGGGAGGATAAGCAATTTGCACAAGAAATTCAAACAAGACAGTACAGATCC
CCTGAAGTTATACTTCAATCTGGATATTCATTCTCTGCTGACATGTGGTCTTTGGCTTGT
ATAGCATTTGAGCTTGCTACTGGTGAGATGATGTTCACTCCCAAAGGTGGAGAAGGTTTC
AGCGAAGATGAGGATCATCTAGCTATGAAGATGGAGCTTCTAGGAAAGATCCCTCGGAAG
ATAGCCGTAGGTGGGGCTAGATCCAAAGATTACTTTGACAGGCACGGAGATTTGAAGAGG
ATCCGTAGACTGAAATATGGTTGTCTAGATAAATTACTAGTTAACAAATATAGATTTTCT
GAAAGTGATGCTCATGAGTTCACGGAATTTCTCAGTCCTCTTCTTGATTTTGAGCCAGAG
AAACGACCAACTGCTGAGCAGTGCTTGCAACACCCATGGCTCAACTTTAAAAATCAAAAG
CAAACAGAGGTGAAGAATGAATCAGGTGTGGAAAGGGTTAATATCGGTATGAGCAAGCTA
CAAATTAAGGTGGGTAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002723
PEP Infomation

pacid=37428760 transcript=PGSC0003DMT400003820 locus=PGSC0003DMG400001514 ID=PGSC0003DMT400003820.v4.03 annot-version=v4.03
Sequence

MSCSSSSASEDEDEGFDSYRKGGYHAVRVGDSFSGGRYIAQRKLGWGEFSTVWLAYDTQS
SGFVALKIQKSAPQFAQAALHEIEVLSAIANGDQSNSKYVVRLIDHFKHTGPNGQHICMV
FEFLGDSLLRLIKHNHYKGLELNKVREICKCVLTGLDYLHGGLGIVHTDLKPENILLLTT
INATKDPIRSGMTPILERPEGNPNGGVTMNIIEKKLKQRARRAAARISGRRSSMGGVGGT
PKSNRSLDGIDLRCKVVDFGNACWEDKQFAQEIQTRQYRSPEVILQSGYSFSADMWSLAC
IAFELATGEMMFTPKGGEGFSEDEDHLAMKMELLGKIPRKIAVGGARSKDYFDRHGDLKR
IRRLKYGCLDKLLVNKYRFSESDAHEFTEFLSPLLDFEPEKRPTAEQCLQHPWLNFKNQK
QTEVKNESGVERVNIGMSKLQIKVGK*

Transcript Sequence

Transcript ID

PGSC0003DMT400003820
Transcript Infomation

pacid=37428760 locus=PGSC0003DMG400001514 ID=PGSC0003DMT400003820.v4.03 annot-version=v4.03
Sequence

ATGTCTTGTTCATCGTCGTCGGCGTCGGAGGATGAAGATGAAGGATTCGATTCTTACCGG
AAGGGAGGGTACCATGCCGTGAGAGTCGGCGATTCATTTTCCGGTGGCCGATATATCGCT
CAACGAAAACTCGGATGGGGAGAGTTTTCCACCGTTTGGCTCGCTTATGATACTCAATCA
TCCGGTTTTGTTGCCTTGAAGATCCAGAAAAGTGCACCACAATTTGCTCAAGCAGCTCTT
CATGAAATTGAAGTCCTTTCTGCGATTGCCAATGGTGATCAATCTAACAGTAAATATGTT
GTACGGCTTATTGACCATTTTAAGCACACAGGCCCTAATGGACAGCACATATGTATGGTT
TTTGAATTTCTTGGTGATAGCTTATTGCGGCTTATCAAGCATAATCACTATAAGGGCCTT
GAACTGAACAAAGTTAGGGAGATATGCAAATGTGTTTTGACTGGTTTAGATTATTTGCAT
GGGGGGCTTGGAATTGTTCATACAGATTTGAAACCTGAAAATATTCTTTTACTTACCACG
ATTAATGCCACAAAAGATCCCATTAGATCCGGAATGACTCCCATACTTGAAAGGCCTGAG
GGGAACCCTAATGGAGGAGTAACAATGAATATCATTGAGAAAAAGCTAAAGCAAAGGGCA
AGAAGAGCAGCAGCTAGGATATCAGGAAGACGTTCTTCAATGGGTGGGGTAGGAGGGACT
CCAAAATCAAATAGATCTCTTGATGGGATAGACTTGAGGTGCAAGGTTGTGGATTTTGGA
AATGCATGCTGGGAGGATAAGCAATTTGCACAAGAAATTCAAACAAGACAGTACAGATCC
CCTGAAGTTATACTTCAATCTGGATATTCATTCTCTGCTGACATGTGGTCTTTGGCTTGT
ATAGCATTTGAGCTTGCTACTGGTGAGATGATGTTCACTCCCAAAGGTGGAGAAGGTTTC
AGCGAAGATGAGGATCATCTAGCTATGAAGATGGAGCTTCTAGGAAAGATCCCTCGGAAG
ATAGCCGTAGGTGGGGCTAGATCCAAAGATTACTTTGACAGGCACGGAGATTTGAAGAGG
ATCCGTAGACTGAAATATGGTTGTCTAGATAAATTACTAGTTAACAAATATAGATTTTCT
GAAAGTGATGCTCATGAGTTCACGGAATTTCTCAGTCCTCTTCTTGATTTTGAGCCAGAG
AAACGACCAACTGCTGAGCAGTGCTTGCAACACCCATGGCTCAACTTTAAAAATCAAAAG
CAAACAGAGGTGAAGAATGAATCAGGTGTGGAAAGGGTTAATATCGGTATGAGCAAGCTA
CAAATTAAGGTGGGTAAGTGA