Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003724
CDS Infomation

pacid=37424449 polypeptide=PGSC0003DMP400002659 locus=PGSC0003DMG400001466 ID=PGSC0003DMT400003724.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTGACGACGAAAAGAAGCAGAATGGAACTTCTTTTGATCTCAATGACTTCACC
ATCATCAAGGAGGGAGATGCTGAGATTCTTATGCATGCCAAAAATGAAGTTTTCTACAAC
AATTCCCAGGTGAATAACAGAGATATGTCTATAGCTGTTTTGAGGACATTTATATCACAA
CGAAAGCAAGAGCATGACGCAATGTTAGCTAGACGAACCAAGGCTGGAAATAAGGCACCT
AATGCTAAAGCGGAAAACCCAGGTGATTCAGTGCAGCATAATGGTGAATCCAATGATGGA
TCTGAAGTCTTGAAAGACGCATCCCATGGTGAATCATCTAGCATTCCAGTGGAACAGACT
AAAAATCTACGGGGAAAAGGCCGAGAAGAACTAAAGCCTCCACGAGTTCTCGAGGCTCTC
TCAGCTTCTGGATTGAGGGCTTTAAGGTATGCTCGTGAAGTAGAAGGAATTAGCCAGGTC
GTGGCCCTTGACAATGATAAAGCCTCTGTGGAAGCTTGCAGGAGAAACATAAAGTTTAAT
GGTTCAGTGGCATGCTCTAAGGTGGAGTCTCACCTTGCTGATGCGAGGGTTTATATGCTT
ACCCACCCAAACGAATTTGATGTGGTTGATCTCGATCCTTATGGAGCACCTTCTGTGTTC
TTAGACTCAGCAGTTCAATCTGTTGCTGATGGAGGAATATTGATGTGTACCGCAACTGAT
ATGGCAGTGTTATGTGCAGCAAATGGAGAAGTTTGCTATTCCAAATATGGCTCCTATCCT
TTGAGAGGAAAATATTGCCATGAAATGGCTTTGCGGATCCTTCTTGCGTCTATTGAGAGC
CATGCAAATCGATATAAGAGATATATAGTTCCAGTATTATCTGTTCAGATGGATTTCTAT
GTTCGCGTTTTTGTTCGTATATACACTTCTGCAAGTGATGTGAAAAATACTCCTTTGAAG
CTCTCATATGTCTATCAATGCATTGGCTGTGACTCATTTCATCTTCAGACAGTTGGGAGG
ACTGTCTCAAAGGATAAGAGTGTCCGATGCCTCCCTGGATTTGGCCCTGCGGTTCCTCAA
GAGTGTAGTGATTGTGGTAAGAAATTCAACATGGGTGGACCCATATGGTCTGCCCCCATT
CATGATCAAGAATGGGTAGCTGCCATGCTTGCAAATGTGAAATCAATGAAGGAACGCTAT
CCTGCTTATGAGCGGATCTCTGCTGTATTGACAACTGTATCAGAGGAACTACCTGATATT
CCTCTGTTTCTGAGTTTGCACAATCTCTGTGCAACACTGAAATGCACTTCTCCCTCAGCA
GTAATATTTCGCTCTGCTGTGATAAACGCAGGATATCGCATATCAGGGACTCATGTGAAT
CCTTTGGGGTTGAAAACAGATGCTCCTATGAATGTCATTTGGGATATTATGCGTTGCTGG
GTCAGAAATCATCCTGTGAAAGCTCAACCATCTGACCAGTCTGGAAGTGTGATCCTTGCT
AAGGAGCCTGTTCTGCAGGCTAATTTTGCTCGGGCTGTTGCATCCCTTAGCCAGGCACAA
GCCAAGAAGGTTGCTCGTTTCCTCCCTAATCCTGAGAGGAATTGGGGTCCAAAACTAAGG
GCAGGCCGGCAGATCACCAGTAAGCATGTGTCTCTTTTGGGTCCTAAAGCATTGAATGCA
ATGAGCAACCATGAAATTGGCGAGGGTTGCAACCATGAGAATGGCGATGGTAGCAACCAT
GAGAATGGTGATGGTAGCAACCATGAGGATGTCGAGGAGCCTGCAGCCAAGCGTAAGAAG
ACCGAAGAATCTGATTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400002659
PEP Infomation

pacid=37424449 transcript=PGSC0003DMT400003724 locus=PGSC0003DMG400001466 ID=PGSC0003DMT400003724.v4.03 annot-version=v4.03
Sequence

MAGDDEKKQNGTSFDLNDFTIIKEGDAEILMHAKNEVFYNNSQVNNRDMSIAVLRTFISQ
RKQEHDAMLARRTKAGNKAPNAKAENPGDSVQHNGESNDGSEVLKDASHGESSSIPVEQT
KNLRGKGREELKPPRVLEALSASGLRALRYAREVEGISQVVALDNDKASVEACRRNIKFN
GSVACSKVESHLADARVYMLTHPNEFDVVDLDPYGAPSVFLDSAVQSVADGGILMCTATD
MAVLCAANGEVCYSKYGSYPLRGKYCHEMALRILLASIESHANRYKRYIVPVLSVQMDFY
VRVFVRIYTSASDVKNTPLKLSYVYQCIGCDSFHLQTVGRTVSKDKSVRCLPGFGPAVPQ
ECSDCGKKFNMGGPIWSAPIHDQEWVAAMLANVKSMKERYPAYERISAVLTTVSEELPDI
PLFLSLHNLCATLKCTSPSAVIFRSAVINAGYRISGTHVNPLGLKTDAPMNVIWDIMRCW
VRNHPVKAQPSDQSGSVILAKEPVLQANFARAVASLSQAQAKKVARFLPNPERNWGPKLR
AGRQITSKHVSLLGPKALNAMSNHEIGEGCNHENGDGSNHENGDGSNHEDVEEPAAKRKK
TEESDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400003724
Transcript Infomation

pacid=37424449 locus=PGSC0003DMG400001466 ID=PGSC0003DMT400003724.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTGACGACGAAAAGAAGCAGAATGGAACTTCTTTTGATCTCAATGACTTCACC
ATCATCAAGGAGGGAGATGCTGAGATTCTTATGCATGCCAAAAATGAAGTTTTCTACAAC
AATTCCCAGGTGAATAACAGAGATATGTCTATAGCTGTTTTGAGGACATTTATATCACAA
CGAAAGCAAGAGCATGACGCAATGTTAGCTAGACGAACCAAGGCTGGAAATAAGGCACCT
AATGCTAAAGCGGAAAACCCAGGTGATTCAGTGCAGCATAATGGTGAATCCAATGATGGA
TCTGAAGTCTTGAAAGACGCATCCCATGGTGAATCATCTAGCATTCCAGTGGAACAGACT
AAAAATCTACGGGGAAAAGGCCGAGAAGAACTAAAGCCTCCACGAGTTCTCGAGGCTCTC
TCAGCTTCTGGATTGAGGGCTTTAAGGTATGCTCGTGAAGTAGAAGGAATTAGCCAGGTC
GTGGCCCTTGACAATGATAAAGCCTCTGTGGAAGCTTGCAGGAGAAACATAAAGTTTAAT
GGTTCAGTGGCATGCTCTAAGGTGGAGTCTCACCTTGCTGATGCGAGGGTTTATATGCTT
ACCCACCCAAACGAATTTGATGTGGTTGATCTCGATCCTTATGGAGCACCTTCTGTGTTC
TTAGACTCAGCAGTTCAATCTGTTGCTGATGGAGGAATATTGATGTGTACCGCAACTGAT
ATGGCAGTGTTATGTGCAGCAAATGGAGAAGTTTGCTATTCCAAATATGGCTCCTATCCT
TTGAGAGGAAAATATTGCCATGAAATGGCTTTGCGGATCCTTCTTGCGTCTATTGAGAGC
CATGCAAATCGATATAAGAGATATATAGTTCCAGTATTATCTGTTCAGATGGATTTCTAT
GTTCGCGTTTTTGTTCGTATATACACTTCTGCAAGTGATGTGAAAAATACTCCTTTGAAG
CTCTCATATGTCTATCAATGCATTGGCTGTGACTCATTTCATCTTCAGACAGTTGGGAGG
ACTGTCTCAAAGGATAAGAGTGTCCGATGCCTCCCTGGATTTGGCCCTGCGGTTCCTCAA
GAGTGTAGTGATTGTGGTAAGAAATTCAACATGGGTGGACCCATATGGTCTGCCCCCATT
CATGATCAAGAATGGGTAGCTGCCATGCTTGCAAATGTGAAATCAATGAAGGAACGCTAT
CCTGCTTATGAGCGGATCTCTGCTGTATTGACAACTGTATCAGAGGAACTACCTGATATT
CCTCTGTTTCTGAGTTTGCACAATCTCTGTGCAACACTGAAATGCACTTCTCCCTCAGCA
GTAATATTTCGCTCTGCTGTGATAAACGCAGGATATCGCATATCAGGGACTCATGTGAAT
CCTTTGGGGTTGAAAACAGATGCTCCTATGAATGTCATTTGGGATATTATGCGTTGCTGG
GTCAGAAATCATCCTGTGAAAGCTCAACCATCTGACCAGTCTGGAAGTGTGATCCTTGCT
AAGGAGCCTGTTCTGCAGGCTAATTTTGCTCGGGCTGTTGCATCCCTTAGCCAGGCACAA
GCCAAGAAGGTTGCTCGTTTCCTCCCTAATCCTGAGAGGAATTGGGGTCCAAAACTAAGG
GCAGGCCGGCAGATCACCAGTAAGCATGTGTCTCTTTTGGGTCCTAAAGCATTGAATGCA
ATGAGCAACCATGAAATTGGCGAGGGTTGCAACCATGAGAATGGCGATGGTAGCAACCAT
GAGAATGGTGATGGTAGCAACCATGAGGATGTCGAGGAGCCTGCAGCCAAGCGTAAGAAG
ACCGAAGAATCTGATTCATAA