Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003717
CDS Infomation

pacid=37424964 polypeptide=PGSC0003DMP400002653 locus=PGSC0003DMG400001462 ID=PGSC0003DMT400003717.v4.03 annot-version=v4.03
Sequence

ATGTCAGCAAGAATGTTATCTTCTATAACAGAGGACAACAAAGATCTGCACAAGAAAATT
GGATGCATGAATGGGTTATTCCAATTGTTTGATAGACACCATTTCCTTATTGGCAAACAT
CTCCATGGTCAAAATCACAAAAGGCTACTCACAGGTGCCATGGACAAGATGGAGACCAAA
TGTACAATGCAATTGGCTACGGAAAAGACTCCAAGGGATGTAGCCAGGAACAAAGTATCG
CACTCAAGTGAGTCATCCAAGGCTAACCCAAAAGTTGAACAAAGTAAAAGACCACAACAA
GAGCAACCTCTTTGCGGTCAAAGAAACTTATCAGAATCTCCTTCGAAAACCCTGCCATAC
AAGCAACCAAGTTCTCCATCTCATTCTGGACGGCAATCTCCTGACTTCCGGGATGTTGTC
AAGGACTCGATGCACAGGGAAGCCCGTAGTTTATCTGTAAAAACTGTCACCAAAGTAGAA
GGTAAAGTCCATGTTATGAAGCACATTGATTCTCCAAGGCCATTTCAGCAGTCAAACTGT
GGGAAGCCATCGGATGGAACTAGGAACTTAACTGCTAAGTTTCGTGAAGCACCTCGCAAT
TCAAAAGATGATCTAAAGCATGCACCAAGAGATCATCCACGTTTCTCATACGATGAAAGA
GACTCGAGAGAAGCGATGCGTTCTTCAATAAGGCTAAAGGACCTTCCCAGACTTTCACTG
GACAGTAGAGAACAGTCCTTCAGGAGCTCAGCCTCTGAATCCAGATCAAATTTTCTTTTA
GGGGATCACAAAAGATCTTCCAGTGTTGTAGCAAAGCTTATGGGGTTGGAAGCTTTACCA
AATCCCATTCCCTCAAATGAAGTCGAGACAGTGATACCTAAGTCTTTCTCTACCAAAGAT
TCTGTTTCAGTATCGACAAAAACAGCTGAAAAGAGCAAGAATAATCAAGTCACGCGGTTC
TCACAGATTAATGAAAAGGATTTCGGCTCCCCACGAATGAAATCTACCAATTTAATCATG
AGAGCAGCATCAACTTCACGGCTTCCACTAGAACCTGCTCCCTGGAGGCAACCGGAGGCC
AGCAGAACCTCCCTCAAGTCATCTGCAAGAAACACAGATGTGGAACTGTCAATTCAGAGT
CCAAAGCTATCTTTCTCGGTGTATGGTGAAATGGAGAAAAGGATAACTGAACTTGAGTTC
AGAAAGTCTGGAAAGGACCTCAGAGCTCTGAAGCAGATTCTTGAAGCAATGCAGAAGACA
AGAGCAAGGTTAGATGTCCAAACAGAAGAGCAGGCAGACTCTGATGCGAACTTGGAAATA
GTGCAGAAAAGGCAGCAATGCAACCTGCTCTCTCCGACCATAAAGGGAACTCGTCCACCA
AAAAGAGAGGATACAGCTGACAAGAAAACTTGGAAAGATGTGACACCTAGAGCAAAAAAT
ATCAGAGAGTCTGGTTGGCTTCTTCCTTCACCAGACAGGAAGATCAAAGAAGGAACATCA
AGGGCAGTGCAAAACCCAACATTACGCCAACAAAAGGAAGGAAGCTATCCTGCAATAGGA
AGGAATTCTGGAACTGTAAGTCCAAGACCACTACAGAAGAAGAAGCAATCTTGTCCAACC
ACTACATCACCAGAATTCAGCAGGGTCAGACGGCAATCAATTAAGCAATCCAAAGAATCA
GGCTCTTCAAAAAGGAGACTGCAAGCAAAACCCAACAATCTGCTCCGAGTTGATGAGGAA
TTGAGTGAGATCAGCAGCAGCACAAGAAATTTCAGTGAGCAAAGTGATGCAGCTTCTTTA
CAATCAGAAAGCAACAACAGTTGGAGCTCACATGCAGAGGGAGAAGTCACAAGCAGAAAT
CACTCCTTTAGGGTTAATGCTAAAAGACTAGAGGATTCTAAAGACAAAAGTAACATATTG
AGGCTCACTGAAGACAGGCCAATGGCTGAACTTGCAATTTCTACAATTGAACAGCCAAGT
CCAGTCTCAGTGCTTGATGCCACATTCTATGAAGAAGATTCACCATCTCCTGTGAAGAAG
AAAACAACTGCATTTAGAGTTGAGGATGCCGCAGATGAGTTATGGTACCTAGATTACCAG
GATCGCTCACCTTACAACACGAGGATGGATCTTGGCACTGAGGCCACCACCCAGAAGAAA
TTAGAGCGCATTAAGGACCTGGTTAACCAACTCAGACTACTGGACTCCAGCTACGAAGTG
AGTACTGACCAGTTTGGATCCTTGAGCCAGAATCATAATCCTGACCACAGATACATCACC
AAAATACTACTGGCATCTGGCCTTCTCAAGGACGTGGACTCCGTCTCCATGGCCATTCAG
CTTCAGTCATCCGGCCATTTGATCGATCAAAAGTTGTTTCATATCCTGGAACAGACTGAG
GAGCACGTTATGCCAGCAAATGGACACAGTAAAACGAGTGCTCGGATTGAGTTTAATCAG
AAAATGCACAGAAAGAACGTCTTTGACACAGTCGATGAGATACTTTCTTGCAAACTAGCT
TCAGAAAGCTGTTTATTGCAGGGACGAGATCATTTAAGTGCACAGCAACTCCAGAAGGAA
CTGCAGTCAGACATAGACCAACTCAATGCTAAAAAGGTTGGCATGGACTCTGAAGAAGAT
GACTTGATAAGTATCCTAAATGCAGATTTGAGGCGTCAGTCCGAAGATTGGACAAACGGT
GACAGTGAAATTCCATCATTGATTTTGGATGTGGAGCGCTTAATATATAAAGACCTTATT
ACAGAAATAATAAGTGATGAGGCCAGAGAGCAGCAGATAAGAACAAGAAGGCATTGTAGG
CAACTATTTACCAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002653
PEP Infomation

pacid=37424964 transcript=PGSC0003DMT400003717 locus=PGSC0003DMG400001462 ID=PGSC0003DMT400003717.v4.03 annot-version=v4.03
Sequence

MSARMLSSITEDNKDLHKKIGCMNGLFQLFDRHHFLIGKHLHGQNHKRLLTGAMDKMETK
CTMQLATEKTPRDVARNKVSHSSESSKANPKVEQSKRPQQEQPLCGQRNLSESPSKTLPY
KQPSSPSHSGRQSPDFRDVVKDSMHREARSLSVKTVTKVEGKVHVMKHIDSPRPFQQSNC
GKPSDGTRNLTAKFREAPRNSKDDLKHAPRDHPRFSYDERDSREAMRSSIRLKDLPRLSL
DSREQSFRSSASESRSNFLLGDHKRSSSVVAKLMGLEALPNPIPSNEVETVIPKSFSTKD
SVSVSTKTAEKSKNNQVTRFSQINEKDFGSPRMKSTNLIMRAASTSRLPLEPAPWRQPEA
SRTSLKSSARNTDVELSIQSPKLSFSVYGEMEKRITELEFRKSGKDLRALKQILEAMQKT
RARLDVQTEEQADSDANLEIVQKRQQCNLLSPTIKGTRPPKREDTADKKTWKDVTPRAKN
IRESGWLLPSPDRKIKEGTSRAVQNPTLRQQKEGSYPAIGRNSGTVSPRPLQKKKQSCPT
TTSPEFSRVRRQSIKQSKESGSSKRRLQAKPNNLLRVDEELSEISSSTRNFSEQSDAASL
QSESNNSWSSHAEGEVTSRNHSFRVNAKRLEDSKDKSNILRLTEDRPMAELAISTIEQPS
PVSVLDATFYEEDSPSPVKKKTTAFRVEDAADELWYLDYQDRSPYNTRMDLGTEATTQKK
LERIKDLVNQLRLLDSSYEVSTDQFGSLSQNHNPDHRYITKILLASGLLKDVDSVSMAIQ
LQSSGHLIDQKLFHILEQTEEHVMPANGHSKTSARIEFNQKMHRKNVFDTVDEILSCKLA
SESCLLQGRDHLSAQQLQKELQSDIDQLNAKKVGMDSEEDDLISILNADLRRQSEDWTNG
DSEIPSLILDVERLIYKDLITEIISDEAREQQIRTRRHCRQLFTN*

Transcript Sequence

Transcript ID

PGSC0003DMT400003717
Transcript Infomation

pacid=37424964 locus=PGSC0003DMG400001462 ID=PGSC0003DMT400003717.v4.03 annot-version=v4.03
Sequence

ATGTCAGCAAGAATGTTATCTTCTATAACAGAGGACAACAAAGATCTGCACAAGAAAATT
GGATGCATGAATGGGTTATTCCAATTGTTTGATAGACACCATTTCCTTATTGGCAAACAT
CTCCATGGTCAAAATCACAAAAGGCTACTCACAGGTGCCATGGACAAGATGGAGACCAAA
TGTACAATGCAATTGGCTACGGAAAAGACTCCAAGGGATGTAGCCAGGAACAAAGTATCG
CACTCAAGTGAGTCATCCAAGGCTAACCCAAAAGTTGAACAAAGTAAAAGACCACAACAA
GAGCAACCTCTTTGCGGTCAAAGAAACTTATCAGAATCTCCTTCGAAAACCCTGCCATAC
AAGCAACCAAGTTCTCCATCTCATTCTGGACGGCAATCTCCTGACTTCCGGGATGTTGTC
AAGGACTCGATGCACAGGGAAGCCCGTAGTTTATCTGTAAAAACTGTCACCAAAGTAGAA
GGTAAAGTCCATGTTATGAAGCACATTGATTCTCCAAGGCCATTTCAGCAGTCAAACTGT
GGGAAGCCATCGGATGGAACTAGGAACTTAACTGCTAAGTTTCGTGAAGCACCTCGCAAT
TCAAAAGATGATCTAAAGCATGCACCAAGAGATCATCCACGTTTCTCATACGATGAAAGA
GACTCGAGAGAAGCGATGCGTTCTTCAATAAGGCTAAAGGACCTTCCCAGACTTTCACTG
GACAGTAGAGAACAGTCCTTCAGGAGCTCAGCCTCTGAATCCAGATCAAATTTTCTTTTA
GGGGATCACAAAAGATCTTCCAGTGTTGTAGCAAAGCTTATGGGGTTGGAAGCTTTACCA
AATCCCATTCCCTCAAATGAAGTCGAGACAGTGATACCTAAGTCTTTCTCTACCAAAGAT
TCTGTTTCAGTATCGACAAAAACAGCTGAAAAGAGCAAGAATAATCAAGTCACGCGGTTC
TCACAGATTAATGAAAAGGATTTCGGCTCCCCACGAATGAAATCTACCAATTTAATCATG
AGAGCAGCATCAACTTCACGGCTTCCACTAGAACCTGCTCCCTGGAGGCAACCGGAGGCC
AGCAGAACCTCCCTCAAGTCATCTGCAAGAAACACAGATGTGGAACTGTCAATTCAGAGT
CCAAAGCTATCTTTCTCGGTGTATGGTGAAATGGAGAAAAGGATAACTGAACTTGAGTTC
AGAAAGTCTGGAAAGGACCTCAGAGCTCTGAAGCAGATTCTTGAAGCAATGCAGAAGACA
AGAGCAAGGTTAGATGTCCAAACAGAAGAGCAGGCAGACTCTGATGCGAACTTGGAAATA
GTGCAGAAAAGGCAGCAATGCAACCTGCTCTCTCCGACCATAAAGGGAACTCGTCCACCA
AAAAGAGAGGATACAGCTGACAAGAAAACTTGGAAAGATGTGACACCTAGAGCAAAAAAT
ATCAGAGAGTCTGGTTGGCTTCTTCCTTCACCAGACAGGAAGATCAAAGAAGGAACATCA
AGGGCAGTGCAAAACCCAACATTACGCCAACAAAAGGAAGGAAGCTATCCTGCAATAGGA
AGGAATTCTGGAACTGTAAGTCCAAGACCACTACAGAAGAAGAAGCAATCTTGTCCAACC
ACTACATCACCAGAATTCAGCAGGGTCAGACGGCAATCAATTAAGCAATCCAAAGAATCA
GGCTCTTCAAAAAGGAGACTGCAAGCAAAACCCAACAATCTGCTCCGAGTTGATGAGGAA
TTGAGTGAGATCAGCAGCAGCACAAGAAATTTCAGTGAGCAAAGTGATGCAGCTTCTTTA
CAATCAGAAAGCAACAACAGTTGGAGCTCACATGCAGAGGGAGAAGTCACAAGCAGAAAT
CACTCCTTTAGGGTTAATGCTAAAAGACTAGAGGATTCTAAAGACAAAAGTAACATATTG
AGGCTCACTGAAGACAGGCCAATGGCTGAACTTGCAATTTCTACAATTGAACAGCCAAGT
CCAGTCTCAGTGCTTGATGCCACATTCTATGAAGAAGATTCACCATCTCCTGTGAAGAAG
AAAACAACTGCATTTAGAGTTGAGGATGCCGCAGATGAGTTATGGTACCTAGATTACCAG
GATCGCTCACCTTACAACACGAGGATGGATCTTGGCACTGAGGCCACCACCCAGAAGAAA
TTAGAGCGCATTAAGGACCTGGTTAACCAACTCAGACTACTGGACTCCAGCTACGAAGTG
AGTACTGACCAGTTTGGATCCTTGAGCCAGAATCATAATCCTGACCACAGATACATCACC
AAAATACTACTGGCATCTGGCCTTCTCAAGGACGTGGACTCCGTCTCCATGGCCATTCAG
CTTCAGTCATCCGGCCATTTGATCGATCAAAAGTTGTTTCATATCCTGGAACAGACTGAG
GAGCACGTTATGCCAGCAAATGGACACAGTAAAACGAGTGCTCGGATTGAGTTTAATCAG
AAAATGCACAGAAAGAACGTCTTTGACACAGTCGATGAGATACTTTCTTGCAAACTAGCT
TCAGAAAGCTGTTTATTGCAGGGACGAGATCATTTAAGTGCACAGCAACTCCAGAAGGAA
CTGCAGTCAGACATAGACCAACTCAATGCTAAAAAGGTTGGCATGGACTCTGAAGAAGAT
GACTTGATAAGTATCCTAAATGCAGATTTGAGGCGTCAGTCCGAAGATTGGACAAACGGT
GACAGTGAAATTCCATCATTGATTTTGGATGTGGAGCGCTTAATATATAAAGACCTTATT
ACAGAAATAATAAGTGATGAGGCCAGAGAGCAGCAGATAAGAACAAGAAGGCATTGTAGG
CAACTATTTACCAACTAA