Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003712
CDS Infomation

pacid=37426367 polypeptide=PGSC0003DMP400002648 locus=PGSC0003DMG400001460 ID=PGSC0003DMT400003712.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGATATT
TTTTCGAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAACAAATTTCATGAAATT
CCTAATGAGGAAGATGATTTGGAGCTGAGTTTGGGGCTTTCATTGAATGGAAGATTTGGG
GTAGACCCTGAAAGGGCTAAGAGACTTAAACGCTCTTCTTCAATTTCTAACTTTGTGTTT
TCCGGCGGGGATGAGAGTAATGGCCGTTGTTCATTCTCTGTTGGTCCGATTACGAGGACG
TGTTCGTTGCCTGTTGAGGGTGAGGAGGAGTGCAGAAAAAGGAAGGAGTTGCAATCTCTG
AGGCGTTTGGAGGCTAAAAGGAAGAGAATGGAGAAATTACAGAATGTTAGAGTGGTGAAG
GATAAGGTTGATTTAGACGAACGTCCTGAAGAAAATGGTGGTCCAGGTGGGAATTCATTG
CCTGTGTCACAAGGGTCTATGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTT
GGGAGTCAACCTATTCAAGGGCCAGGTGACAACAGTACTGGGGCAAATACTCCGGCTAGC
ATCAAGCCTTCAGAGCATGAACGGAAACAGGTAGCTAAACCACCTAAAATCACAAGCGAA
AAACCAGCTAGCACATGTAATGGAAATGCTAGCAAGGAAGCAAAAGAAATGTTCAAAAAC
TACATGCTCAACATGCCTTGTGTTTCCACAATGGGCAATGGGCCAAATGGTAAGAAGATC
GAAGGATTTCTGTATAGATATCAGAAGGGAGAGGAAGTGAAAATAATGTGCGTTTGTCAT
GGCAACTTTCTGTCGCCAGCTGAGTTTGTGAAGCATGCTGGTGGCGGTGATGTTGCGAAT
CCGTTGAAGCAAATTGTCGTCAATCCTTCACCTCTATTGAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002648
PEP Infomation

pacid=37426367 transcript=PGSC0003DMT400003712 locus=PGSC0003DMG400001460 ID=PGSC0003DMT400003712.v4.03 annot-version=v4.03
Sequence

MAEAEENREKRCFSSMQMDIFSRDLLHKFMNGNNNKFHEIPNEEDDLELSLGLSLNGRFG
VDPERAKRLKRSSSISNFVFSGGDESNGRCSFSVGPITRTCSLPVEGEEECRKRKELQSL
RRLEAKRKRMEKLQNVRVVKDKVDLDERPEENGGPGGNSLPVSQGSMASQGSGSSGISDF
GSQPIQGPGDNSTGANTPASIKPSEHERKQVAKPPKITSEKPASTCNGNASKEAKEMFKN
YMLNMPCVSTMGNGPNGKKIEGFLYRYQKGEEVKIMCVCHGNFLSPAEFVKHAGGGDVAN
PLKQIVVNPSPLLR*

Transcript Sequence

Transcript ID

PGSC0003DMT400003712
Transcript Infomation

pacid=37426367 locus=PGSC0003DMG400001460 ID=PGSC0003DMT400003712.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGATATT
TTTTCGAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAACAAATTTCATGAAATT
CCTAATGAGGAAGATGATTTGGAGCTGAGTTTGGGGCTTTCATTGAATGGAAGATTTGGG
GTAGACCCTGAAAGGGCTAAGAGACTTAAACGCTCTTCTTCAATTTCTAACTTTGTGTTT
TCCGGCGGGGATGAGAGTAATGGCCGTTGTTCATTCTCTGTTGGTCCGATTACGAGGACG
TGTTCGTTGCCTGTTGAGGGTGAGGAGGAGTGCAGAAAAAGGAAGGAGTTGCAATCTCTG
AGGCGTTTGGAGGCTAAAAGGAAGAGAATGGAGAAATTACAGAATGTTAGAGTGGTGAAG
GATAAGGTTGATTTAGACGAACGTCCTGAAGAAAATGGTGGTCCAGGTGGGAATTCATTG
CCTGTGTCACAAGGGTCTATGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTT
GGGAGTCAACCTATTCAAGGGCCAGGTGACAACAGTACTGGGGCAAATACTCCGGCTAGC
ATCAAGCCTTCAGAGCATGAACGGAAACAGGTAGCTAAACCACCTAAAATCACAAGCGAA
AAACCAGCTAGCACATGTAATGGAAATGCTAGCAAGGAAGCAAAAGAAATGTTCAAAAAC
TACATGCTCAACATGCCTTGTGTTTCCACAATGGGCAATGGGCCAAATGGTAAGAAGATC
GAAGGATTTCTGTATAGATATCAGAAGGGAGAGGAAGTGAAAATAATGTGCGTTTGTCAT
GGCAACTTTCTGTCGCCAGCTGAGTTTGTGAAGCATGCTGGTGGCGGTGATGTTGCGAAT
CCGTTGAAGCAAATTGTCGTCAATCCTTCACCTCTATTGAGATGA