Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003688
CDS Infomation

pacid=37427191 polypeptide=PGSC0003DMP400002638 locus=PGSC0003DMG400001454 ID=PGSC0003DMT400003688.v4.03 annot-version=v4.03
Sequence

ATGGGAGACTGTGAATCTTCAGTCCCCCTAATGGAAGAAGAAGAAAACCTAATAGCTGCT
GCACAGAACATTGTGAAAGCGTTGGGGTCAAATAGGACTTTAACAGATGATGCTAGGAAA
ATTTTGGCTGATCTAGGCTCCCAATTGTCTTCTATAACTAGAGTGAGTGAACCCGAAGAT
GAGGGAGCTGGTGAAACTGAGGAGCAGCTTATTGAGCTGGAGGAGGAGCTTAATTTAGTG
CAGAGTAAGGTCATGAACTGGGAGGTGGGTAAGTCAATGATATGGGATTGTGGCCAGGAA
GAAGCTTATGAGTATTTGAGATATGTGGATCAAGGTCGAAAATTGATTGAGAGATTGGAG
AGTTTGAACTTGGTGAAAGGCAGTAAAGAAGATGAGCTTCTGCGTAGGGCTCATGATCTT
CTGCAAACAGCAATGAATCGTCTTGAGGAGGAGTTTACGCATTTGCTTGTTCACAACAGG
CAGCCTTTTGAGCCGGAGCATATGTCTTTTCGTTCCAGTGAAGACGATACGTTGGATGAT
GGCTCAATTGTGTCGTTTGGGGATGACTCGATTGAGGATGTGGTTCAAAGAGATAGCATG
AGTAGGAGTTCAGGGGAGTACATCATTGAACTGGTGCATCCAGATGTTATTCCTGACCTA
AAATGCATTGCCAATTTGATGTTTGATTCAAATTATGGCCGGGAATGTTCTCAAGCATTT
ATCAATGTCAGAAAAGATGGCTTGGATGATTGCCTCTTCATTCTTGAAGTAGAGAAGTTG
AGCATTGAGGATGTATTGAAGATGGAATGGAACTCATTGAACTCCAAAATCAGGAGGTGG
ATACGGGCTATGAAGATCTTTGTGCGCATTTATCTTGCCAGTGAAAAATGGTTAAGTGAT
CAAATTTTTAGTGAGCTGGAAGCAGTTGGTTCAGTTTGCTTTGCTGAGGCCTCGAAAGCT
TCAATCTTGCAGCTTCTGAACTTTGGTGAAGCCATAGCTATTGGCCCTCATCAACCGGAG
AAATTGATTCGGATTCTTGACATGTATGAGGTGCTTGCAGATCTTATCCCAGATATTGAT
GCTATGTACTCTGATGAGGTGGGGTTATGCGTTAGAAGAGAGTGCCAAGATATTCTTAGA
AGCTTGGGTGATTGTGCAAAGGCAACCTTTCTGGAATTTGAAAATGCTGTTGCTTCCAGC
ATATCAGCCAACCCTTTTCCTGGTGGCGGGATACACCATCTCACGAGGTATGTCATGAAC
TACATGAAAACTCTTATTGATTATAGCAAGACACTTGATGAGCTTCTGAAGGGCCACGAG
AAGGAAGATTCAGTGGCCATTTTACCAGACATGACACCTGATAGAGAAGAAGATAACACA
GACAGACGCTGTTACATTTCTCCGCTGGCTCAACATTTTCGATCCTTCACTTCAATCTTG
GAATGCAACCTTGAGGATAAGGCCAGGTTATACAAGGATGAGTCACTAGGTCACCTTTTC
TTAATGAATAATATTCATTACATGGCTGAAAAGGTGAAGAATTCCAATCTAAGAACAATA
CTAGGCGATGGTTGGATCCGAAAACATAATTGGAAATTCCAACATCATGCAATGAGCTAT
GAGAGAGCTACTTGGAGCTCTATCCTCTCTTTCCTCAGAGATGAAGGGCTATATAATCCA
GGCTCGAATTCTATCTCAAGAACTCTTCTCAAGGAGAGACTAAACAACTTTTATCTCTCA
TTTGAGGATGTTTACAAGAGCCAGACAGGATGGTCTATCCCAGATAGTCAACTTCGTGAA
GATCTTCGAATCTCAACATCACTCAAGGTTATCCAGGGATACAGGACATTTTTTGGAAGA
CACGCCAACCATATAAGCGACAAGCACATAAGGTATACTGCGGACGATTTGGAGAACTTC
CTTTTGGATCTCTTTGAGGGATCTCCAAGATCTTTACATGGTTCCCACAGGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002638
PEP Infomation

pacid=37427191 transcript=PGSC0003DMT400003688 locus=PGSC0003DMG400001454 ID=PGSC0003DMT400003688.v4.03 annot-version=v4.03
Sequence

MGDCESSVPLMEEEENLIAAAQNIVKALGSNRTLTDDARKILADLGSQLSSITRVSEPED
EGAGETEEQLIELEEELNLVQSKVMNWEVGKSMIWDCGQEEAYEYLRYVDQGRKLIERLE
SLNLVKGSKEDELLRRAHDLLQTAMNRLEEEFTHLLVHNRQPFEPEHMSFRSSEDDTLDD
GSIVSFGDDSIEDVVQRDSMSRSSGEYIIELVHPDVIPDLKCIANLMFDSNYGRECSQAF
INVRKDGLDDCLFILEVEKLSIEDVLKMEWNSLNSKIRRWIRAMKIFVRIYLASEKWLSD
QIFSELEAVGSVCFAEASKASILQLLNFGEAIAIGPHQPEKLIRILDMYEVLADLIPDID
AMYSDEVGLCVRRECQDILRSLGDCAKATFLEFENAVASSISANPFPGGGIHHLTRYVMN
YMKTLIDYSKTLDELLKGHEKEDSVAILPDMTPDREEDNTDRRCYISPLAQHFRSFTSIL
ECNLEDKARLYKDESLGHLFLMNNIHYMAEKVKNSNLRTILGDGWIRKHNWKFQHHAMSY
ERATWSSILSFLRDEGLYNPGSNSISRTLLKERLNNFYLSFEDVYKSQTGWSIPDSQLRE
DLRISTSLKVIQGYRTFFGRHANHISDKHIRYTADDLENFLLDLFEGSPRSLHGSHRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400003688
Transcript Infomation

pacid=37427191 locus=PGSC0003DMG400001454 ID=PGSC0003DMT400003688.v4.03 annot-version=v4.03
Sequence

ATGGGAGACTGTGAATCTTCAGTCCCCCTAATGGAAGAAGAAGAAAACCTAATAGCTGCT
GCACAGAACATTGTGAAAGCGTTGGGGTCAAATAGGACTTTAACAGATGATGCTAGGAAA
ATTTTGGCTGATCTAGGCTCCCAATTGTCTTCTATAACTAGAGTGAGTGAACCCGAAGAT
GAGGGAGCTGGTGAAACTGAGGAGCAGCTTATTGAGCTGGAGGAGGAGCTTAATTTAGTG
CAGAGTAAGGTCATGAACTGGGAGGTGGGTAAGTCAATGATATGGGATTGTGGCCAGGAA
GAAGCTTATGAGTATTTGAGATATGTGGATCAAGGTCGAAAATTGATTGAGAGATTGGAG
AGTTTGAACTTGGTGAAAGGCAGTAAAGAAGATGAGCTTCTGCGTAGGGCTCATGATCTT
CTGCAAACAGCAATGAATCGTCTTGAGGAGGAGTTTACGCATTTGCTTGTTCACAACAGG
CAGCCTTTTGAGCCGGAGCATATGTCTTTTCGTTCCAGTGAAGACGATACGTTGGATGAT
GGCTCAATTGTGTCGTTTGGGGATGACTCGATTGAGGATGTGGTTCAAAGAGATAGCATG
AGTAGGAGTTCAGGGGAGTACATCATTGAACTGGTGCATCCAGATGTTATTCCTGACCTA
AAATGCATTGCCAATTTGATGTTTGATTCAAATTATGGCCGGGAATGTTCTCAAGCATTT
ATCAATGTCAGAAAAGATGGCTTGGATGATTGCCTCTTCATTCTTGAAGTAGAGAAGTTG
AGCATTGAGGATGTATTGAAGATGGAATGGAACTCATTGAACTCCAAAATCAGGAGGTGG
ATACGGGCTATGAAGATCTTTGTGCGCATTTATCTTGCCAGTGAAAAATGGTTAAGTGAT
CAAATTTTTAGTGAGCTGGAAGCAGTTGGTTCAGTTTGCTTTGCTGAGGCCTCGAAAGCT
TCAATCTTGCAGCTTCTGAACTTTGGTGAAGCCATAGCTATTGGCCCTCATCAACCGGAG
AAATTGATTCGGATTCTTGACATGTATGAGGTGCTTGCAGATCTTATCCCAGATATTGAT
GCTATGTACTCTGATGAGGTGGGGTTATGCGTTAGAAGAGAGTGCCAAGATATTCTTAGA
AGCTTGGGTGATTGTGCAAAGGCAACCTTTCTGGAATTTGAAAATGCTGTTGCTTCCAGC
ATATCAGCCAACCCTTTTCCTGGTGGCGGGATACACCATCTCACGAGGTATGTCATGAAC
TACATGAAAACTCTTATTGATTATAGCAAGACACTTGATGAGCTTCTGAAGGGCCACGAG
AAGGAAGATTCAGTGGCCATTTTACCAGACATGACACCTGATAGAGAAGAAGATAACACA
GACAGACGCTGTTACATTTCTCCGCTGGCTCAACATTTTCGATCCTTCACTTCAATCTTG
GAATGCAACCTTGAGGATAAGGCCAGGTTATACAAGGATGAGTCACTAGGTCACCTTTTC
TTAATGAATAATATTCATTACATGGCTGAAAAGGTGAAGAATTCCAATCTAAGAACAATA
CTAGGCGATGGTTGGATCCGAAAACATAATTGGAAATTCCAACATCATGCAATGAGCTAT
GAGAGAGCTACTTGGAGCTCTATCCTCTCTTTCCTCAGAGATGAAGGGCTATATAATCCA
GGCTCGAATTCTATCTCAAGAACTCTTCTCAAGGAGAGACTAAACAACTTTTATCTCTCA
TTTGAGGATGTTTACAAGAGCCAGACAGGATGGTCTATCCCAGATAGTCAACTTCGTGAA
GATCTTCGAATCTCAACATCACTCAAGGTTATCCAGGGATACAGGACATTTTTTGGAAGA
CACGCCAACCATATAAGCGACAAGCACATAAGGTATACTGCGGACGATTTGGAGAACTTC
CTTTTGGATCTCTTTGAGGGATCTCCAAGATCTTTACATGGTTCCCACAGGAAGTGA