Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003652
CDS Infomation

pacid=37425610 polypeptide=PGSC0003DMP400002610 locus=PGSC0003DMG400001442 ID=PGSC0003DMT400003652.v4.03 annot-version=v4.03
Sequence

ATGTCTACTGTGACGTCATTTTCCGGCGTACAGTTTTGCGTTCCTTCTTCTTCTTCCAAT
TCTTCAAGCAGAGTAGCTTTATTTTCATCGCATTCAGCGCCGTACCTGAACTTCTCAGGA
AAATCGCGAGTTCTTGACAAGTGTAATTCGTTGAAACTGAAGAGGAAGGATGTGTTCTTC
ACTAGAAAAACTGAGAAACTCTCCCAGGGTTCAAGGCTTACCATACGTTGTGATGCTTCA
AGTGGAAGGATCACTCAGCAAGATTTTACGGAAATGGCATGGCAAGCAATTGTTGCATCG
CCAGAAATAGCGAAAGAGAACAAGCATCAAATAGTAGAGACTGAACACTTGATGAAGGCA
CTGTTGGAGCAAAAGAATGGGCTGGCTCGTCGTATATTCTCCAAGGCGGGTGTAGATAAT
ACCCGCCTTTTAGAGGCTACTGATAAGTTTATTAGACAACAACCAAAGGTTATTGGTGAG
ACAGCTGGTTCTATGTTAGGCCGAGAGTTGGAAGGTTTGATGCAGAGAGCCAGGGAGTAC
AAGAAAGAGTATGGTGATTCCTTTGTGTCAGTTGAGCATTTGGTGCTTGGCTTCGTTCAA
GATAAACGATTTGGGAAGCAACTGTTTAATGATTTCCAGATTTCCCTGAAGACATTGAAA
ACTGCCATTGAATCCATAAGGGGACGCCAAAATGTTATTGATCAAGATCCTGAAGGGAAG
TATGAATCACTAGAAAAATATGGAAAAGATCTGACCGCTATGGCTAGAGCGGGGAAGCTT
GACCCAGTTATAGGAAGAGATGATGAGATACGTAGATGCATACAAATCCTCTCCAGGAGA
ACAAAGAATAACCCAGTGTTAATTGGTGAGCCTGGAGTTGGGAAAACTGCAATCTCTGAA
GGGCTTGCTCAGAGAATTGTGCAAGGAGATGTACCTCAGGCTTTGATGAATCGAAAGTTG
ATATCTCTTGATATGGGTGCGCTCATAGCCGGTGCAAAATATCGCGGTGAATTTGAAGAC
AGATTGAAGGCTGTGCTTAAGGAAGTGACAGAATCCGAAGGACAGATCATCCTTTTTATT
GATGAGATACATACTGTTGTTGGTGCAGGTGCCACTAATGGTGCAATGGATGCTGGGAAT
CTCTTGAAACCAATGCTTGGTCGAGGAGAATTACGATGTATTGGTGCAACCACCTTGGAT
GAATACCGTAAATATATTGAGAAAGATCCTGCCCTGGAGCGTCGTTTCCAGCAAGTTTAT
GTTGACCAGCCTACAGTTGAAGACACTGTCTCCATACTTCGCGGATTACGTGAAAGATAT
GAGCTGCATCATGGGGTTCGCATTTCAGACACGGCGCTTGTTGACGCAGCTATTCTTTCG
GACCGTTATATTAGTGGACGTTTTCTACCTGACAAAGCTATTGACCTAGTTGATGAAGCT
GCTGCAAAACTGAAAATGGAGATCACCTCAAAACCTACAGCCCTTGATGAGATCAATCGT
GCAGTTTTGAAGTTGGAGATGGAGAGGCTATCTCTAACTAATGATACAGATAGAGCATCG
AAAGATCGGTTAAACCGTCTTGAGGCTGAATTGTCTCTTTTGAAGGAGAGGCAAGCTGAG
CTGACTGAGCAGTGGGAGCATGAAAAAAGTGTCATGACTCGCTTACAGTCCATTAAGGAA
GAGATTGACAGGGTAAATCTTGAGATCCAGCAAGCAGAGCGGGAATATGATCTTAATCGT
GCTGCTGAACTTAAGTACGGGAGTCTAAACACCTTGCAGCGTCAACTTGAAGCTGCAGAA
AAAGAACTGAGTGATTATATGAAGTCTGGAAAATCGATGCTCAGAGAAGAAGTGACTGGG
AATGATATTGCAGAGATCGTCAGTAAGTGGACTGGGATTCCTGTTTCTAAGTTACAACAG
TCGGAGAGGGAAAAGCTGTTGCATTTAGAGGAAGAGTTGCACAAACGTGTTGTTGGTCAA
GATCCAGCAGTAAGAGCAGTAGCAGAGGCAATCCAGCGCTCGCGTGCTGGACTTTCAGAT
CCTCACCGTCCTATTGCAAGCTTTATGTTCATGGGTCCCACTGGAGTTGGGAAGACGGAG
CTAGCTAAGGCCCTTGCTAACTATTTGTTCAATACTGAAGAAGCACTTGTGCGCATCGAT
ATGAGTGAATACATGGAGAAGCATGCAGTTTCAAGATTGATAGGAGCTCCCCCTGGTTAT
GTCGGGTATGAAGAAGGGGGGCAGTTGACCGAGATTGTTCGCAGGAGACCGTATGCAGTT
ATATTGTTTGATGAAATAGAGAAGGCCCATTCGGATGTATTTAATGTGTTCCTTCAAATC
TTAGATGATGGTAGGGTGACTGACTCACAAGGACGTACAGTGAGTTTCACCAATACTGTC
ATCATCATGACATCAAATGTTGGTTCGCAATATATCCTAAATACAGATGATGATGATAAT
TCATCAAAGGAAGCGACTTATCAAACAATAAAGCGAAGGGTGATGGATGCTGCACGTGCA
GTTTTCCGCCCTGAGTTCATGAATCGGGTTGATGAATATATAGTATTCCAGCCTCTTGAT
CGTGACCAAATCAGTAGCATTGTGCGATTACAGCTTGAGAGAGTGCAGCAGAGATTAGCT
GATCGCAAAATGAAGATTGAAGTGAGCGAAGCTGCTATTCAACTGCTTGGAAGTCTTGGT
TATGACCCCAACTATGGTGCACGGCCAGTGAAGCGGGTGATCCAGCAGAATGTTGAGAAC
GAATTGGCCAAAGGAATATTAAGAGGAGAATTCAAGGATGAGGACACTATTTTAGTAGAC
ACAGAGGTCAGCGCATTCTCCAATGGACAACTTCCTCAGCAGAAGCTAGTGTTTAAAAGA
CAAGAATCTTGTTCAGATTCTCCAGCAGAGAACCAAGAAGCTTTCTCTCAGAAACTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002610
PEP Infomation

pacid=37425610 transcript=PGSC0003DMT400003652 locus=PGSC0003DMG400001442 ID=PGSC0003DMT400003652.v4.03 annot-version=v4.03
Sequence

MSTVTSFSGVQFCVPSSSSNSSSRVALFSSHSAPYLNFSGKSRVLDKCNSLKLKRKDVFF
TRKTEKLSQGSRLTIRCDASSGRITQQDFTEMAWQAIVASPEIAKENKHQIVETEHLMKA
LLEQKNGLARRIFSKAGVDNTRLLEATDKFIRQQPKVIGETAGSMLGRELEGLMQRAREY
KKEYGDSFVSVEHLVLGFVQDKRFGKQLFNDFQISLKTLKTAIESIRGRQNVIDQDPEGK
YESLEKYGKDLTAMARAGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISE
GLAQRIVQGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTESEGQIILFI
DEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVY
VDQPTVEDTVSILRGLRERYELHHGVRISDTALVDAAILSDRYISGRFLPDKAIDLVDEA
AAKLKMEITSKPTALDEINRAVLKLEMERLSLTNDTDRASKDRLNRLEAELSLLKERQAE
LTEQWEHEKSVMTRLQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNTLQRQLEAAE
KELSDYMKSGKSMLREEVTGNDIAEIVSKWTGIPVSKLQQSEREKLLHLEEELHKRVVGQ
DPAVRAVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALANYLFNTEEALVRID
MSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEIVRRRPYAVILFDEIEKAHSDVFNVFLQI
LDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNTDDDDNSSKEATYQTIKRRVMDAARA
VFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLERVQQRLADRKMKIEVSEAAIQLLGSLG
YDPNYGARPVKRVIQQNVENELAKGILRGEFKDEDTILVDTEVSAFSNGQLPQQKLVFKR
QESCSDSPAENQEAFSQKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400003652
Transcript Infomation

pacid=37425610 locus=PGSC0003DMG400001442 ID=PGSC0003DMT400003652.v4.03 annot-version=v4.03
Sequence

ATGTCTACTGTGACGTCATTTTCCGGCGTACAGTTTTGCGTTCCTTCTTCTTCTTCCAAT
TCTTCAAGCAGAGTAGCTTTATTTTCATCGCATTCAGCGCCGTACCTGAACTTCTCAGGA
AAATCGCGAGTTCTTGACAAGTGTAATTCGTTGAAACTGAAGAGGAAGGATGTGTTCTTC
ACTAGAAAAACTGAGAAACTCTCCCAGGGTTCAAGGCTTACCATACGTTGTGATGCTTCA
AGTGGAAGGATCACTCAGCAAGATTTTACGGAAATGGCATGGCAAGCAATTGTTGCATCG
CCAGAAATAGCGAAAGAGAACAAGCATCAAATAGTAGAGACTGAACACTTGATGAAGGCA
CTGTTGGAGCAAAAGAATGGGCTGGCTCGTCGTATATTCTCCAAGGCGGGTGTAGATAAT
ACCCGCCTTTTAGAGGCTACTGATAAGTTTATTAGACAACAACCAAAGGTTATTGGTGAG
ACAGCTGGTTCTATGTTAGGCCGAGAGTTGGAAGGTTTGATGCAGAGAGCCAGGGAGTAC
AAGAAAGAGTATGGTGATTCCTTTGTGTCAGTTGAGCATTTGGTGCTTGGCTTCGTTCAA
GATAAACGATTTGGGAAGCAACTGTTTAATGATTTCCAGATTTCCCTGAAGACATTGAAA
ACTGCCATTGAATCCATAAGGGGACGCCAAAATGTTATTGATCAAGATCCTGAAGGGAAG
TATGAATCACTAGAAAAATATGGAAAAGATCTGACCGCTATGGCTAGAGCGGGGAAGCTT
GACCCAGTTATAGGAAGAGATGATGAGATACGTAGATGCATACAAATCCTCTCCAGGAGA
ACAAAGAATAACCCAGTGTTAATTGGTGAGCCTGGAGTTGGGAAAACTGCAATCTCTGAA
GGGCTTGCTCAGAGAATTGTGCAAGGAGATGTACCTCAGGCTTTGATGAATCGAAAGTTG
ATATCTCTTGATATGGGTGCGCTCATAGCCGGTGCAAAATATCGCGGTGAATTTGAAGAC
AGATTGAAGGCTGTGCTTAAGGAAGTGACAGAATCCGAAGGACAGATCATCCTTTTTATT
GATGAGATACATACTGTTGTTGGTGCAGGTGCCACTAATGGTGCAATGGATGCTGGGAAT
CTCTTGAAACCAATGCTTGGTCGAGGAGAATTACGATGTATTGGTGCAACCACCTTGGAT
GAATACCGTAAATATATTGAGAAAGATCCTGCCCTGGAGCGTCGTTTCCAGCAAGTTTAT
GTTGACCAGCCTACAGTTGAAGACACTGTCTCCATACTTCGCGGATTACGTGAAAGATAT
GAGCTGCATCATGGGGTTCGCATTTCAGACACGGCGCTTGTTGACGCAGCTATTCTTTCG
GACCGTTATATTAGTGGACGTTTTCTACCTGACAAAGCTATTGACCTAGTTGATGAAGCT
GCTGCAAAACTGAAAATGGAGATCACCTCAAAACCTACAGCCCTTGATGAGATCAATCGT
GCAGTTTTGAAGTTGGAGATGGAGAGGCTATCTCTAACTAATGATACAGATAGAGCATCG
AAAGATCGGTTAAACCGTCTTGAGGCTGAATTGTCTCTTTTGAAGGAGAGGCAAGCTGAG
CTGACTGAGCAGTGGGAGCATGAAAAAAGTGTCATGACTCGCTTACAGTCCATTAAGGAA
GAGATTGACAGGGTAAATCTTGAGATCCAGCAAGCAGAGCGGGAATATGATCTTAATCGT
GCTGCTGAACTTAAGTACGGGAGTCTAAACACCTTGCAGCGTCAACTTGAAGCTGCAGAA
AAAGAACTGAGTGATTATATGAAGTCTGGAAAATCGATGCTCAGAGAAGAAGTGACTGGG
AATGATATTGCAGAGATCGTCAGTAAGTGGACTGGGATTCCTGTTTCTAAGTTACAACAG
TCGGAGAGGGAAAAGCTGTTGCATTTAGAGGAAGAGTTGCACAAACGTGTTGTTGGTCAA
GATCCAGCAGTAAGAGCAGTAGCAGAGGCAATCCAGCGCTCGCGTGCTGGACTTTCAGAT
CCTCACCGTCCTATTGCAAGCTTTATGTTCATGGGTCCCACTGGAGTTGGGAAGACGGAG
CTAGCTAAGGCCCTTGCTAACTATTTGTTCAATACTGAAGAAGCACTTGTGCGCATCGAT
ATGAGTGAATACATGGAGAAGCATGCAGTTTCAAGATTGATAGGAGCTCCCCCTGGTTAT
GTCGGGTATGAAGAAGGGGGGCAGTTGACCGAGATTGTTCGCAGGAGACCGTATGCAGTT
ATATTGTTTGATGAAATAGAGAAGGCCCATTCGGATGTATTTAATGTGTTCCTTCAAATC
TTAGATGATGGTAGGGTGACTGACTCACAAGGACGTACAGTGAGTTTCACCAATACTGTC
ATCATCATGACATCAAATGTTGGTTCGCAATATATCCTAAATACAGATGATGATGATAAT
TCATCAAAGGAAGCGACTTATCAAACAATAAAGCGAAGGGTGATGGATGCTGCACGTGCA
GTTTTCCGCCCTGAGTTCATGAATCGGGTTGATGAATATATAGTATTCCAGCCTCTTGAT
CGTGACCAAATCAGTAGCATTGTGCGATTACAGCTTGAGAGAGTGCAGCAGAGATTAGCT
GATCGCAAAATGAAGATTGAAGTGAGCGAAGCTGCTATTCAACTGCTTGGAAGTCTTGGT
TATGACCCCAACTATGGTGCACGGCCAGTGAAGCGGGTGATCCAGCAGAATGTTGAGAAC
GAATTGGCCAAAGGAATATTAAGAGGAGAATTCAAGGATGAGGACACTATTTTAGTAGAC
ACAGAGGTCAGCGCATTCTCCAATGGACAACTTCCTCAGCAGAAGCTAGTGTTTAAAAGA
CAAGAATCTTGTTCAGATTCTCCAGCAGAGAACCAAGAAGCTTTCTCTCAGAAACTATGA