Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003649
CDS Infomation

pacid=37426024 polypeptide=PGSC0003DMP400002607 locus=PGSC0003DMG400001440 ID=PGSC0003DMT400003649.v4.03 annot-version=v4.03
Sequence

ATGGCGACTTCTAAACCACAGAGGACGCCGGCGGAGATCGAGGATATAATTCTTCGGAAA
ATTTTACTTGTATCTCTAGTTGATTCAATGGAAAATGATACACGCGTTGTGTATTTAGAG
ATGACGGCGGCCGAGATTTTGAGCGAGGGTAAAGAATTAAGGTTGTCTAGGGATTTGATG
GAGAGGGTTTTAATCGATCGACTTTCTGGTAATTTTGTATCCGCGGAACCACCTTTTCAG
TATTTGGTCAACTGTTACCGTCGGGCACATGAAGAAGGGAAGAAGATTGCGTCGATGAAG
GATAAGAACGTTAGGTCTGAGATGGAATTAGTGGTTAAGCAAGTAAAGAGACTTGCTGTA
TCATACTGTAGGATACATTTAGGAAATCCTGATATGTTTCCCAATTGGGATATGGCACCA
GCAAATGTATCTCTGTTGCTTCCTTTGTTGTTTTCTGAGGTTTCAAGTTCTGTGGATGTG
TTTGGTGGGAGTAGTGGTAGTGGAGGAGTGTCGAGTCCACCTGGGTTTTTGGATGAGTTA
TTAAAGGATGCGGATTTTGATAGTATGGACCCAATACTGAAGCAGTTGTATGAGGATTTG
AGAGGGACTGTGCTAAAGGTTTCAGCTTTGGGTAATTTTCAGCAGCCTCTTAGAGCTTTA
TTATTTTTGGTTAAGTATCCAGTAGGTGCCAAGTGTCTTGTGAATCATCCTTGGTGGATT
CCAAATAGTGTTTATATGAATGGAAGAGTTATCGAAATGACAAGCATTTTGGGTCCTTTC
TTTCATGTCAGTGCTTTGCCTGATCATACAATCTTCAAGAGTCAGCCGGATGTTGGCCAG
CAGTGTTTCTCAGAATCGGCCACACGTCGTCCTGCTGATCTCTTGTCTTCTTTCACAACA
ATCAAAACTGTTATGAATAACTTGTATGATGGCTTGGCAGAAGTGCTTATGTCTCTTCTG
AAAAATTCAACTATTCGTGAAAATGTCCTTGGATATCTTGCAGCAGTTATAAACAAAAAT
TCGTCAAGGGCACAGTTGCAGGTTGATCCATTATCTTGTGCTAGTTCAGGCATGTTTGTA
AATCTCAGTGCCGTTATGCTTCGGCTCTGTGAACCTTTCTTAGATGCCAATTTGACAAAA
CGGGACAAGATCGATCCCCAATATGTGTTTTCTAGCACCCGTCTGGAACTGAGGGGGTTG
ACTGCTCTGCATGCATCATCAGAAGAAGTCTCTGAATGGATAAATCAAAATAATCCTGGG
AAAGTTGACGTCGCTAAAGAAGGCAGTGATGGAGAAAATCGGTTGTTGGCATCTCAGGAA
GCTACAAGCTCTGGGAATGATTCTGGTGGACCTTCAATTCTCCACTATAACAACCCAATA
TCAAGTAGTAGTGAGAAAGCTAAATACCCCTTCATATGTGAATGCTTCTTCATGACTGCA
CGGGTGCTCAACCTGGGCCTCCTAAAAGCATTTTCAGATTTTAAGCATCTTGTTCAGGAC
ATTTCAAGATCCGAAGATAATTTGTCTACCATGAAAACCATGCTAGAACAAACACCCTCG
CCACAGTTGCAGCAGGAAATAGCTCGCTTGGAAAAAGATCTTGAATCGTATTCACAGGAG
AAATTATGCTATGAAGCCCAAATACTGAGGGATGGAGGGCTTCTCCAGCGTGCATTATCC
TTCTACAGGTTGATGGTTGTTTGGCTGGTCGAGCTTGTTGGTGGTTTTAAGATGCCATTA
CCTTCCCCTTGCCCTATGGAGTTTTCATCTATGCCTGAGCACTTTGTTGAAGATGCCATG
GAGCTGCTAATTTTTGCTTCTCGAATTCCCAGAGCTTTGGATGGTGTCTTGCTGGATGAC
TTCATGAATTTCATTATCATGTTCATGGCAAGTCCAGAATATATCAGAAACCCTTACCTT
AGAGCAAAGATGGTTGAAGTCCTAAACTGTTGGATGCCCCGCAGAAGCGGCTCTACTGCA
ACGTCTACTTTGTTTGAGGGGCATCAACTCTCTCTGGAGTACCTTGTGAAAAATCTTTTG
AAGCTTTATGTTGACATTGAATTTACAGGTTCCCACACACAGTTCTATGATAAATTTAAT
ATCCGCCACAACATTGCTGAACTGCTTGAATATCTTTGGCAAGTTCCAAGTCACCGGAAT
GCATGGAGACAGATTGCCAAGGAGGAGGAGAAGGGTGTTTACTTAAATTTCTTAAACTTC
TTGATTAATGATAGCATCTATCTTCTCGATGAAAGTCTTAATAAAATTCTTGAACTAAAA
GAGCTGGAAGCTGAAATGTCTAACACAGCGGAATGGGAGCAAAGACCAGCTCAAGAAAGG
CAGGAGAGAACCCGTCTGTTCCATTCACAAGAGAATATAATTCGAATTGATATGAAGTTG
GCAAATGAAGATGTGAGCCTGTTAGCATTTACTTCAGAACAAATTACTGTCCCTTTTCTT
CTTCCTGAGATGGTGGAAAGAGTTGCTAGCATGTTGAATTACTTCTTACTACAGCTGGTG
GGTCCACAAAGAAAATCTCTTAGCTTGAAAGACCCTGAAAAGTATGAATTTCGTCCGAAA
GAGTTGCTGAAACAGGTGAATGAAGTTCTTTACATATGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002607
PEP Infomation

pacid=37426024 transcript=PGSC0003DMT400003649 locus=PGSC0003DMG400001440 ID=PGSC0003DMT400003649.v4.03 annot-version=v4.03
Sequence

MATSKPQRTPAEIEDIILRKILLVSLVDSMENDTRVVYLEMTAAEILSEGKELRLSRDLM
ERVLIDRLSGNFVSAEPPFQYLVNCYRRAHEEGKKIASMKDKNVRSEMELVVKQVKRLAV
SYCRIHLGNPDMFPNWDMAPANVSLLLPLLFSEVSSSVDVFGGSSGSGGVSSPPGFLDEL
LKDADFDSMDPILKQLYEDLRGTVLKVSALGNFQQPLRALLFLVKYPVGAKCLVNHPWWI
PNSVYMNGRVIEMTSILGPFFHVSALPDHTIFKSQPDVGQQCFSESATRRPADLLSSFTT
IKTVMNNLYDGLAEVLMSLLKNSTIRENVLGYLAAVINKNSSRAQLQVDPLSCASSGMFV
NLSAVMLRLCEPFLDANLTKRDKIDPQYVFSSTRLELRGLTALHASSEEVSEWINQNNPG
KVDVAKEGSDGENRLLASQEATSSGNDSGGPSILHYNNPISSSSEKAKYPFICECFFMTA
RVLNLGLLKAFSDFKHLVQDISRSEDNLSTMKTMLEQTPSPQLQQEIARLEKDLESYSQE
KLCYEAQILRDGGLLQRALSFYRLMVVWLVELVGGFKMPLPSPCPMEFSSMPEHFVEDAM
ELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSTA
TSTLFEGHQLSLEYLVKNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRN
AWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWEQRPAQER
QERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITVPFLLPEMVERVASMLNYFLLQLV
GPQRKSLSLKDPEKYEFRPKELLKQVNEVLYIC*

Transcript Sequence

Transcript ID

PGSC0003DMT400003649
Transcript Infomation

pacid=37426024 locus=PGSC0003DMG400001440 ID=PGSC0003DMT400003649.v4.03 annot-version=v4.03
Sequence

ATGGCGACTTCTAAACCACAGAGGACGCCGGCGGAGATCGAGGATATAATTCTTCGGAAA
ATTTTACTTGTATCTCTAGTTGATTCAATGGAAAATGATACACGCGTTGTGTATTTAGAG
ATGACGGCGGCCGAGATTTTGAGCGAGGGTAAAGAATTAAGGTTGTCTAGGGATTTGATG
GAGAGGGTTTTAATCGATCGACTTTCTGGTAATTTTGTATCCGCGGAACCACCTTTTCAG
TATTTGGTCAACTGTTACCGTCGGGCACATGAAGAAGGGAAGAAGATTGCGTCGATGAAG
GATAAGAACGTTAGGTCTGAGATGGAATTAGTGGTTAAGCAAGTAAAGAGACTTGCTGTA
TCATACTGTAGGATACATTTAGGAAATCCTGATATGTTTCCCAATTGGGATATGGCACCA
GCAAATGTATCTCTGTTGCTTCCTTTGTTGTTTTCTGAGGTTTCAAGTTCTGTGGATGTG
TTTGGTGGGAGTAGTGGTAGTGGAGGAGTGTCGAGTCCACCTGGGTTTTTGGATGAGTTA
TTAAAGGATGCGGATTTTGATAGTATGGACCCAATACTGAAGCAGTTGTATGAGGATTTG
AGAGGGACTGTGCTAAAGGTTTCAGCTTTGGGTAATTTTCAGCAGCCTCTTAGAGCTTTA
TTATTTTTGGTTAAGTATCCAGTAGGTGCCAAGTGTCTTGTGAATCATCCTTGGTGGATT
CCAAATAGTGTTTATATGAATGGAAGAGTTATCGAAATGACAAGCATTTTGGGTCCTTTC
TTTCATGTCAGTGCTTTGCCTGATCATACAATCTTCAAGAGTCAGCCGGATGTTGGCCAG
CAGTGTTTCTCAGAATCGGCCACACGTCGTCCTGCTGATCTCTTGTCTTCTTTCACAACA
ATCAAAACTGTTATGAATAACTTGTATGATGGCTTGGCAGAAGTGCTTATGTCTCTTCTG
AAAAATTCAACTATTCGTGAAAATGTCCTTGGATATCTTGCAGCAGTTATAAACAAAAAT
TCGTCAAGGGCACAGTTGCAGGTTGATCCATTATCTTGTGCTAGTTCAGGCATGTTTGTA
AATCTCAGTGCCGTTATGCTTCGGCTCTGTGAACCTTTCTTAGATGCCAATTTGACAAAA
CGGGACAAGATCGATCCCCAATATGTGTTTTCTAGCACCCGTCTGGAACTGAGGGGGTTG
ACTGCTCTGCATGCATCATCAGAAGAAGTCTCTGAATGGATAAATCAAAATAATCCTGGG
AAAGTTGACGTCGCTAAAGAAGGCAGTGATGGAGAAAATCGGTTGTTGGCATCTCAGGAA
GCTACAAGCTCTGGGAATGATTCTGGTGGACCTTCAATTCTCCACTATAACAACCCAATA
TCAAGTAGTAGTGAGAAAGCTAAATACCCCTTCATATGTGAATGCTTCTTCATGACTGCA
CGGGTGCTCAACCTGGGCCTCCTAAAAGCATTTTCAGATTTTAAGCATCTTGTTCAGGAC
ATTTCAAGATCCGAAGATAATTTGTCTACCATGAAAACCATGCTAGAACAAACACCCTCG
CCACAGTTGCAGCAGGAAATAGCTCGCTTGGAAAAAGATCTTGAATCGTATTCACAGGAG
AAATTATGCTATGAAGCCCAAATACTGAGGGATGGAGGGCTTCTCCAGCGTGCATTATCC
TTCTACAGGTTGATGGTTGTTTGGCTGGTCGAGCTTGTTGGTGGTTTTAAGATGCCATTA
CCTTCCCCTTGCCCTATGGAGTTTTCATCTATGCCTGAGCACTTTGTTGAAGATGCCATG
GAGCTGCTAATTTTTGCTTCTCGAATTCCCAGAGCTTTGGATGGTGTCTTGCTGGATGAC
TTCATGAATTTCATTATCATGTTCATGGCAAGTCCAGAATATATCAGAAACCCTTACCTT
AGAGCAAAGATGGTTGAAGTCCTAAACTGTTGGATGCCCCGCAGAAGCGGCTCTACTGCA
ACGTCTACTTTGTTTGAGGGGCATCAACTCTCTCTGGAGTACCTTGTGAAAAATCTTTTG
AAGCTTTATGTTGACATTGAATTTACAGGTTCCCACACACAGTTCTATGATAAATTTAAT
ATCCGCCACAACATTGCTGAACTGCTTGAATATCTTTGGCAAGTTCCAAGTCACCGGAAT
GCATGGAGACAGATTGCCAAGGAGGAGGAGAAGGGTGTTTACTTAAATTTCTTAAACTTC
TTGATTAATGATAGCATCTATCTTCTCGATGAAAGTCTTAATAAAATTCTTGAACTAAAA
GAGCTGGAAGCTGAAATGTCTAACACAGCGGAATGGGAGCAAAGACCAGCTCAAGAAAGG
CAGGAGAGAACCCGTCTGTTCCATTCACAAGAGAATATAATTCGAATTGATATGAAGTTG
GCAAATGAAGATGTGAGCCTGTTAGCATTTACTTCAGAACAAATTACTGTCCCTTTTCTT
CTTCCTGAGATGGTGGAAAGAGTTGCTAGCATGTTGAATTACTTCTTACTACAGCTGGTG
GGTCCACAAAGAAAATCTCTTAGCTTGAAAGACCCTGAAAAGTATGAATTTCGTCCGAAA
GAGTTGCTGAAACAGGTGAATGAAGTTCTTTACATATGTTGA