Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003635
CDS Infomation

pacid=37426425 polypeptide=PGSC0003DMP400002596 locus=PGSC0003DMG400001433 ID=PGSC0003DMT400003635.v4.03 annot-version=v4.03
Sequence

ATGGTTGCCCTAAAGAAGGTGCGATTTGATAATTTCCAACCTGATAGTGTCAGATTTATG
GCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGG
ATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTTTTCGAGTATATGGAACATGAC
CTATCTGGATTATTATCATGTCCTGACATCAAATTTAGTGATTCACAGATTAAATGCTAC
ATGCAGCAGCTACTGAGAGGACTAGAGCACTGCCATTCACGAGGGATAATGCATCGGGAT
ATAAAAGTTTCCAACATTTTGGTTAACAATGAAGGCACTCTGAAAATAGCAGATTTTGGT
CTTGCGAATTTCCTTAATGCTAGGCACAAGCAACCACTGACCAGTCGTGTGGTTACATTA
TGGTATCGACCTCCTGAACTTCTATTAGGATCAACAAGTTATGGGGTCACTGTGGATTTG
TGGAGTGTTGGTTGCGTTTTTGCAGAACTCTTTTTCGGAAGGCCACTCCTGAAAGGGAGG
ACCGAGGTTGAGCAATTGCACAAAATTTTCAAACTTTGTGGTTCTCCACCCGAAGATTAC
TGGAAAAGGTCTAAACTTCCACTTGCTACCATGTTTAAGCCCAAGCAACCATATGACAGT
ACACTTCGAGATAGATGTAAAGAATTACCAAAAACTGCTGTTAACCTTATTGAAACACTT
ATTTCAATAGATCCTCATAAACGTGGAACTGCTTCATCTGCTCTCAATTCTGAGTATTTC
AATACCAAGCCTTATGCTTGTGACTCATCAAGCCTGCCTAAGTACCCACCGAACAAGGAA
ATTGATGCAAAGTTCAGGGAAGAAGCGAGAAGAAAGAGAGCCAGTTCCACAGTGCAAACA
TCGGAAACTTCAAGAAATTCAAGAAAAGCCCGGAAAGGTCTTCAAGAACCAAGCAATTTC
TGCAAAGTTGTTCCAGCAGAGGAAGTTGAGGCAAATGTTCATGGTTCTCATAGAAATTAC
GGTAGTAATGCACATATATCTAAAGGAAGACGAGCTACTGTCTCACGGATATCAATGAAA
CCATTGTATGACACAGTATCAGACGCTGCTTCTCAGATGACTGATGAGTCTCAAGGAGAC
AGCACCGTTCTTTCTGTTCCTGTGCAAATGCCAGAATCGAGTGGTTTTGCATGGGCCAAA
AAAGGAAAGAAGGGTTCTGCAGCCACAAGATTATATCCACCTCCCAATTCAAGAAGTCAA
AAGTTGAGTGCCTTCGATCCTTCTGGTGTACTCCACTCTGGGGATACCTTGGAATCAAAT
ATGCAAGATAATGATGAGTTTTTAAGAAGGACCCACACTTTCCAGCATTCTATCCATAGG
AAACATGGTCATCATGAACGCCAAGATTCATTTGACTTGTCTGATCAGGAACTATCAGCG
GATTACGATGGCCAACAAGGAAGGGTTGGGTTCTCGGGGCCCTTGTTATCTCAATCCCAG
ACGTTTGACCCGAAGAAGGATAGTCAAGCTCGAAAAGCTGGTCGTAGGTCCCGATTCTAT
GGAGATTTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400002596
PEP Infomation

pacid=37426425 transcript=PGSC0003DMT400003635 locus=PGSC0003DMG400001433 ID=PGSC0003DMT400003635.v4.03 annot-version=v4.03
Sequence

MVALKKVRFDNFQPDSVRFMAREIAILRKLDHPNIMKLEGIITSRLSCSIYLVFEYMEHD
LSGLLSCPDIKFSDSQIKCYMQQLLRGLEHCHSRGIMHRDIKVSNILVNNEGTLKIADFG
LANFLNARHKQPLTSRVVTLWYRPPELLLGSTSYGVTVDLWSVGCVFAELFFGRPLLKGR
TEVEQLHKIFKLCGSPPEDYWKRSKLPLATMFKPKQPYDSTLRDRCKELPKTAVNLIETL
ISIDPHKRGTASSALNSEYFNTKPYACDSSSLPKYPPNKEIDAKFREEARRKRASSTVQT
SETSRNSRKARKGLQEPSNFCKVVPAEEVEANVHGSHRNYGSNAHISKGRRATVSRISMK
PLYDTVSDAASQMTDESQGDSTVLSVPVQMPESSGFAWAKKGKKGSAATRLYPPPNSRSQ
KLSAFDPSGVLHSGDTLESNMQDNDEFLRRTHTFQHSIHRKHGHHERQDSFDLSDQELSA
DYDGQQGRVGFSGPLLSQSQTFDPKKDSQARKAGRRSRFYGDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400003635
Transcript Infomation

pacid=37426425 locus=PGSC0003DMG400001433 ID=PGSC0003DMT400003635.v4.03 annot-version=v4.03
Sequence

ATGGTTGCCCTAAAGAAGGTGCGATTTGATAATTTCCAACCTGATAGTGTCAGATTTATG
GCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGG
ATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTTTTCGAGTATATGGAACATGAC
CTATCTGGATTATTATCATGTCCTGACATCAAATTTAGTGATTCACAGATTAAATGCTAC
ATGCAGCAGCTACTGAGAGGACTAGAGCACTGCCATTCACGAGGGATAATGCATCGGGAT
ATAAAAGTTTCCAACATTTTGGTTAACAATGAAGGCACTCTGAAAATAGCAGATTTTGGT
CTTGCGAATTTCCTTAATGCTAGGCACAAGCAACCACTGACCAGTCGTGTGGTTACATTA
TGGTATCGACCTCCTGAACTTCTATTAGGATCAACAAGTTATGGGGTCACTGTGGATTTG
TGGAGTGTTGGTTGCGTTTTTGCAGAACTCTTTTTCGGAAGGCCACTCCTGAAAGGGAGG
ACCGAGGTTGAGCAATTGCACAAAATTTTCAAACTTTGTGGTTCTCCACCCGAAGATTAC
TGGAAAAGGTCTAAACTTCCACTTGCTACCATGTTTAAGCCCAAGCAACCATATGACAGT
ACACTTCGAGATAGATGTAAAGAATTACCAAAAACTGCTGTTAACCTTATTGAAACACTT
ATTTCAATAGATCCTCATAAACGTGGAACTGCTTCATCTGCTCTCAATTCTGAGTATTTC
AATACCAAGCCTTATGCTTGTGACTCATCAAGCCTGCCTAAGTACCCACCGAACAAGGAA
ATTGATGCAAAGTTCAGGGAAGAAGCGAGAAGAAAGAGAGCCAGTTCCACAGTGCAAACA
TCGGAAACTTCAAGAAATTCAAGAAAAGCCCGGAAAGGTCTTCAAGAACCAAGCAATTTC
TGCAAAGTTGTTCCAGCAGAGGAAGTTGAGGCAAATGTTCATGGTTCTCATAGAAATTAC
GGTAGTAATGCACATATATCTAAAGGAAGACGAGCTACTGTCTCACGGATATCAATGAAA
CCATTGTATGACACAGTATCAGACGCTGCTTCTCAGATGACTGATGAGTCTCAAGGAGAC
AGCACCGTTCTTTCTGTTCCTGTGCAAATGCCAGAATCGAGTGGTTTTGCATGGGCCAAA
AAAGGAAAGAAGGGTTCTGCAGCCACAAGATTATATCCACCTCCCAATTCAAGAAGTCAA
AAGTTGAGTGCCTTCGATCCTTCTGGTGTACTCCACTCTGGGGATACCTTGGAATCAAAT
ATGCAAGATAATGATGAGTTTTTAAGAAGGACCCACACTTTCCAGCATTCTATCCATAGG
AAACATGGTCATCATGAACGCCAAGATTCATTTGACTTGTCTGATCAGGAACTATCAGCG
GATTACGATGGCCAACAAGGAAGGGTTGGGTTCTCGGGGCCCTTGTTATCTCAATCCCAG
ACGTTTGACCCGAAGAAGGATAGTCAAGCTCGAAAAGCTGGTCGTAGGTCCCGATTCTAT
GGAGATTTATAA