Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003597
CDS Infomation

pacid=37427699 polypeptide=PGSC0003DMP400002566 locus=PGSC0003DMG400001422 ID=PGSC0003DMT400003597.v4.03 annot-version=v4.03
Sequence

ATGGATTTCTATTATCGCTTATTCTTTCAAAATCTGTTCTTGTTTCTTGCTATCCTATTC
ATCTCTGTTTTCTTCTATTTGGTTCCTCTGTTCACTTTCATCCCTACATTGTTCCTCAGA
TTAAGAAGGGGTCACGCTACTTTAAACGACAATTCGGAATTTTTTGAAGTTCTGCCTGAA
GAAAAACAATTCGACAATGAGAAAGTTGATTCGGACAAGAATGACGATAAGGAGAAAACT
GAGTTTTGTTTTAAGTTTAAATTCCCAACCTATGAGGAATTTAGGAAAGACAAGACAGAA
ACTGGTGAACTTATCGCGTCTGAGTTTGTACCAGAAAAGAGTTTTAGCAGTTTAATTCAA
GAACCTGAGATTGTGAACCTGAATGCTGAAGAAATTGGTTGTAATATGAAAGATGTGTTT
GATTTGGATGAAGAAGACAGGAAAGAAGTACCACATCATAAAATGGAAGGCATTCAGGAG
GAAGAGGAGCACACAGGCGCGCCTGAACACCACGGTTATCAAAAGGAAATTGAAGGAATG
GAATTCCTCAAGGGAGAATCAGATTCTGTCTGCAAACAATTATTGGGTGATTCAGATTTC
CCTGATGAATTTTTGTTTCAATCAGAGAAAGATTCTTCAGGTACTGATTCAGATACTGTA
TCAGTTGGTTTTGAGCATATGCGTTCGCTTATGAGCAGGTTAGTAAATTCCTACAGTGAT
GGCTTCTTGTCAGATGAAGATTTTGGTGGTGAATTTGAGCTTGATCCTTTAAATTTAAAA
AATCTTGATTTGTCTGAAGAAAATCATGAATCTGAGGATTTTGAGGACAGTGATAGTGAT
ATAATGGAAGAGTTAAGGGGATTAGAACAAGAAGACCAGCAAAATGACTCAGAATTTTTA
TCCCAGAATGATATTCATGAAGATTTGGGCATGGTTGAAAGCTTAGAATTTGTTACAGAA
GATGACAAGTTAATTTATGGTCCACAAGAGTCTGAAAATCCCAAGTCAATAAACACAGCT
ATTGTTGACACTTCTGGGGATGCAAACAAATTAGAATCCCTGTGGGAACATCAAGAGTTG
ATTGAACAATTAAAGATGGAAATTCGAAAAGTCAGAGCCACGGGTCTGCCTACTATTTTG
GAAGAGTCTGAGTCTCCAACAATGGACGAATTACAACCGTGGAAGATTGATGAAATGCTT
CATCGTGAAGATTCTATGAGCGAACTTCACAAATTCTACAAGAGTTACAGAGAGAAAATG
CGAAAATTCGACATCTTGACGTATCAGAAGATGTATGCAATAGGTTATCTGCAGAAAGAT
CTGCTAAAAGATCCACTGCAATTACTGTTCAACCAGAAATCTTCAGAAATGCAGAGTGAT
TTGGAAGTGGTATACGTTGGCCAGATGTGCCTTTCTTGGGAATTTTTGCACTGGCAATAT
ATGAAGGCTTTAAATTTGTGGGATTCTGACCCACGTGGGATCCGAAAATATAATGAAGTA
GCTGGAGAGTTTCAACAGTTTCAGGTGCTCATGCAAAGATTTATTGAAAATGAACCTTTT
CAAGGGCCTAGAGTTCAATATTTTATCAAGAGTCGATATGATCTTCGTAATCTTCTTCAA
GTTCCTGTTATTAGAGATGACAGAGTGAAGGACAGAAACAAGGCAAGAACAAAAGAGAAA
GCTGTTTTTTCAATTACAAGTGACATGCTAGTGGAGATACTGGAAGAATCTATACGAATA
TTTTGGCGCTTTGTCAAAGCCGATAAAGATTGTTATAGCGTGATGGCGAAAGGTCAAAAG
GGAATTCATCCAGAGGTTCAAGAACAAGAGGACGTGGAGCTTTTACTGGAGATCAGAAAA
AATCTTGAAAAGAAGGAGAAGAAGCTGCAGGAAGTTTTGAGAAGTGGAAATTGCATATTG
AGGAAGTTCAGGAAGAACAGAGAAGATGATTCAGATCATGTACTCTATTTTTTCTCTCAA
GTAGATGTGAAATTAGTGGCTAGGGTCCTCAACATGTCAAGGCTAACCAAAGATCAACTA
GTGTGGTGTCACAATAAATTAAGCAGGATTAGTTTTGTACATAGGAAAATACATGTAGAG
CCCTCTTTTTTGCTCTTCCCTTGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002566
PEP Infomation

pacid=37427699 transcript=PGSC0003DMT400003597 locus=PGSC0003DMG400001422 ID=PGSC0003DMT400003597.v4.03 annot-version=v4.03
Sequence

MDFYYRLFFQNLFLFLAILFISVFFYLVPLFTFIPTLFLRLRRGHATLNDNSEFFEVLPE
EKQFDNEKVDSDKNDDKEKTEFCFKFKFPTYEEFRKDKTETGELIASEFVPEKSFSSLIQ
EPEIVNLNAEEIGCNMKDVFDLDEEDRKEVPHHKMEGIQEEEEHTGAPEHHGYQKEIEGM
EFLKGESDSVCKQLLGDSDFPDEFLFQSEKDSSGTDSDTVSVGFEHMRSLMSRLVNSYSD
GFLSDEDFGGEFELDPLNLKNLDLSEENHESEDFEDSDSDIMEELRGLEQEDQQNDSEFL
SQNDIHEDLGMVESLEFVTEDDKLIYGPQESENPKSINTAIVDTSGDANKLESLWEHQEL
IEQLKMEIRKVRATGLPTILEESESPTMDELQPWKIDEMLHREDSMSELHKFYKSYREKM
RKFDILTYQKMYAIGYLQKDLLKDPLQLLFNQKSSEMQSDLEVVYVGQMCLSWEFLHWQY
MKALNLWDSDPRGIRKYNEVAGEFQQFQVLMQRFIENEPFQGPRVQYFIKSRYDLRNLLQ
VPVIRDDRVKDRNKARTKEKAVFSITSDMLVEILEESIRIFWRFVKADKDCYSVMAKGQK
GIHPEVQEQEDVELLLEIRKNLEKKEKKLQEVLRSGNCILRKFRKNREDDSDHVLYFFSQ
VDVKLVARVLNMSRLTKDQLVWCHNKLSRISFVHRKIHVEPSFLLFPC*

Transcript Sequence

Transcript ID

PGSC0003DMT400003597
Transcript Infomation

pacid=37427699 locus=PGSC0003DMG400001422 ID=PGSC0003DMT400003597.v4.03 annot-version=v4.03
Sequence

ATGGATTTCTATTATCGCTTATTCTTTCAAAATCTGTTCTTGTTTCTTGCTATCCTATTC
ATCTCTGTTTTCTTCTATTTGGTTCCTCTGTTCACTTTCATCCCTACATTGTTCCTCAGA
TTAAGAAGGGGTCACGCTACTTTAAACGACAATTCGGAATTTTTTGAAGTTCTGCCTGAA
GAAAAACAATTCGACAATGAGAAAGTTGATTCGGACAAGAATGACGATAAGGAGAAAACT
GAGTTTTGTTTTAAGTTTAAATTCCCAACCTATGAGGAATTTAGGAAAGACAAGACAGAA
ACTGGTGAACTTATCGCGTCTGAGTTTGTACCAGAAAAGAGTTTTAGCAGTTTAATTCAA
GAACCTGAGATTGTGAACCTGAATGCTGAAGAAATTGGTTGTAATATGAAAGATGTGTTT
GATTTGGATGAAGAAGACAGGAAAGAAGTACCACATCATAAAATGGAAGGCATTCAGGAG
GAAGAGGAGCACACAGGCGCGCCTGAACACCACGGTTATCAAAAGGAAATTGAAGGAATG
GAATTCCTCAAGGGAGAATCAGATTCTGTCTGCAAACAATTATTGGGTGATTCAGATTTC
CCTGATGAATTTTTGTTTCAATCAGAGAAAGATTCTTCAGGTACTGATTCAGATACTGTA
TCAGTTGGTTTTGAGCATATGCGTTCGCTTATGAGCAGGTTAGTAAATTCCTACAGTGAT
GGCTTCTTGTCAGATGAAGATTTTGGTGGTGAATTTGAGCTTGATCCTTTAAATTTAAAA
AATCTTGATTTGTCTGAAGAAAATCATGAATCTGAGGATTTTGAGGACAGTGATAGTGAT
ATAATGGAAGAGTTAAGGGGATTAGAACAAGAAGACCAGCAAAATGACTCAGAATTTTTA
TCCCAGAATGATATTCATGAAGATTTGGGCATGGTTGAAAGCTTAGAATTTGTTACAGAA
GATGACAAGTTAATTTATGGTCCACAAGAGTCTGAAAATCCCAAGTCAATAAACACAGCT
ATTGTTGACACTTCTGGGGATGCAAACAAATTAGAATCCCTGTGGGAACATCAAGAGTTG
ATTGAACAATTAAAGATGGAAATTCGAAAAGTCAGAGCCACGGGTCTGCCTACTATTTTG
GAAGAGTCTGAGTCTCCAACAATGGACGAATTACAACCGTGGAAGATTGATGAAATGCTT
CATCGTGAAGATTCTATGAGCGAACTTCACAAATTCTACAAGAGTTACAGAGAGAAAATG
CGAAAATTCGACATCTTGACGTATCAGAAGATGTATGCAATAGGTTATCTGCAGAAAGAT
CTGCTAAAAGATCCACTGCAATTACTGTTCAACCAGAAATCTTCAGAAATGCAGAGTGAT
TTGGAAGTGGTATACGTTGGCCAGATGTGCCTTTCTTGGGAATTTTTGCACTGGCAATAT
ATGAAGGCTTTAAATTTGTGGGATTCTGACCCACGTGGGATCCGAAAATATAATGAAGTA
GCTGGAGAGTTTCAACAGTTTCAGGTGCTCATGCAAAGATTTATTGAAAATGAACCTTTT
CAAGGGCCTAGAGTTCAATATTTTATCAAGAGTCGATATGATCTTCGTAATCTTCTTCAA
GTTCCTGTTATTAGAGATGACAGAGTGAAGGACAGAAACAAGGCAAGAACAAAAGAGAAA
GCTGTTTTTTCAATTACAAGTGACATGCTAGTGGAGATACTGGAAGAATCTATACGAATA
TTTTGGCGCTTTGTCAAAGCCGATAAAGATTGTTATAGCGTGATGGCGAAAGGTCAAAAG
GGAATTCATCCAGAGGTTCAAGAACAAGAGGACGTGGAGCTTTTACTGGAGATCAGAAAA
AATCTTGAAAAGAAGGAGAAGAAGCTGCAGGAAGTTTTGAGAAGTGGAAATTGCATATTG
AGGAAGTTCAGGAAGAACAGAGAAGATGATTCAGATCATGTACTCTATTTTTTCTCTCAA
GTAGATGTGAAATTAGTGGCTAGGGTCCTCAACATGTCAAGGCTAACCAAAGATCAACTA
GTGTGGTGTCACAATAAATTAAGCAGGATTAGTTTTGTACATAGGAAAATACATGTAGAG
CCCTCTTTTTTGCTCTTCCCTTGTTAA