Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003589
CDS Infomation

pacid=37428787 polypeptide=PGSC0003DMP400002561 locus=PGSC0003DMG400001419 ID=PGSC0003DMT400003589.v4.03 annot-version=v4.03
Sequence

ATGGCTAAAGGATTGGGTTTGGGATGTACCTACGGAATAGCATGCATGTCATGGGCCCTT
GTTTTTTGGTATGCTGGGGTTTTCATTAGGAATGGACAGAGTGATGGTGGAAAGGCATTT
ACTGCTATTTTCTCAGCCATTGTTGGTGGCATGAGTTTAGGTCAGTCATTTTCCAATCTT
GGGGCATTCAGCAAAGGAAAAGCAGCTGGATACAAGTTAATGGAAATTATTAGGCAGAAA
CCGACCATTGTGCAAGATACTCTAGATGGGAAATGCCTGTCTGAGGTCAGCGGGAACATT
GAATTCAAAAATGTGACCTTCAGCTATCCGTCAAGACCTGATGTGATTATCTTCAGAGAT
TTCAACATTTTCTTCCCTGCTGGAAAAACAGTTGCCGTGGTTGGTGGCAGTGGCTCAGGA
AAAAGCACAGTCGTCTCATTGATAGAAAGATTTTATGATCCTAATGATGGTCAAGTTTTG
CTTGACAATGTGGACATAAAGACGTTACAACTTAGATGGTTGCGTGATCAGATTGGCCTT
GTAAATCAAGAGCCTGCGTTATTTGCTACTACCATACTCGAGAACATTCTGTACGGAAAG
CCTGATGCAACCATGGCTGAAGTTGAGGCGGCTACCTGCGCTTCCAATGCACATAGCTTT
ATTACCTTGCTTCCTAACGGATACAACACCCAGGTGGGAGAGCGTGGTGTACAACTCTCT
GGTGGACAGAAACAGAGAATTGCAATTGCAAGAGCTATGTTAAAGAACCCGAAGATCCTC
CTGCTTGATGAGGCCACCAGTGCTCTTGATGCTGGTTCCGAAAGCATTGTCCAGGAAGCT
CTAGACCGTCTCATGGTTGGCCGTACTACTGTGGTTGTAGCTCACCGTCTCTCCACAATT
AGAAATGTCGATTCAATTGCAGTTATACAGCAAGGGCAGGTGGTTGAGACTGGAACACAT
GAAGAACTGATTTCCAAAGCTGGGGCTTATGCTTCTTTAATCAGATTCCAGGAAATGGTT
GGGAACAGAGACTTTTCAAATCCATCTACTCGCCGTACTCGTTCAACTCGGTTAAGTCAT
TCATTATCAACAAAGTCTCTAAGCCTTCGCTCTGGAAGTTTAAGGAATTTGAGCTATTCA
TACAGTACCGGTGCAGATGGGCGTATAGAAATGATCTCTAATGCTGAAACAGATAGGAAA
AATCCTGCTCCACAGAATTATTTCTGCCGGCTTCTCAAACTGAATGCGCCTGAGTGGCCT
TATTCAATCATGGGGGCCGTAGGGTCTGTCCTCTCCGGTTTCATTGGTCCAACTTTTGCT
ATTGTGATGAGCAACATGATTGAGGTATTCTACTATACAAATCCCGCAACCATGGAAAGA
AAGACGAAGGAATATGTCTTCATCTACATTGGAGCGGGTCTTTATGCCGTTGTAGCATAT
TTAATACAGCATTACTTCTTCAGTATTATGGGAGAAAACCTCACTACCAGGGTTCGGAGG
ATGATGTTGTCAGCAATTTTAAGGAATGAAGTCGGTTGGTTCGACGAGGAGGAGAACAAT
TCAAGTCTACTAGCAGCTCGTTTAGCTACAGATGCTGCAGATGTTAAATCTGCTATAGCG
GAGAGGATCTCCGTTATACTGCAGAATATGACATCTCTTCTCACTTCATTCATAGTTGCA
TTTATAGTCGAATGGCGGGTCTCACTGCTCATCCTCGCCACATTTCCGCTTCTCGTCTTG
GCCAATTTCGCTCAGCAACTCTCACTGAAAGGATTTGCTGGAGACACGGCCAAGGCGCAT
GCGAAGACTAGCATGATTGCTGGAGAAGGAGTAAGCAATATTAGAACTGTAGCAGCCTTC
AATGCCCAAGAGAAGATTATCTCTTTGTTCTCCCAAGAGCTTCGAGTTCCACAAATGCAG
AGTCTTCGACGAAGCCAAATGTCAGGACTCTTATTTGGTATATCACAGCTTGCTCTTTAT
GGTTCTGAAGCTTTGATTCTTTGGTATGGTGCACACCTTGTTAACAACGGGGTCTCGACT
TTCTCTAAGGTGATTAAGGTCTTTGTAGTCCTTGTGATCACAGCTAATTCAGTCGCTGAA
ACCGTCAGCCTAGCACCCGAGATTATTAGGGGTGGTGAAGCTGTTGGTTCAGTATTTTCT
ATTCTTGATCGCTCTACCAGGGTCGATCCTGATGACCCTGAAGCCGATCCAGTTGAATCA
ATTAGAGGGGATATTGAACTCCGTCATGTTGATTTTGCATACCCTTCACGACCGGATGTC
TCTGTGTTCAAGGACCTCAATCTAAGGATTCGCGCTGGCCAAAGCCAAGCTCTTGTTGGG
GCAAGTGGGTCGGGAAAGAGCTCCGTTATAGCCTTAATCGAAAGGTTCTATGACCCAACC
GGTGGAAAAGTTATGATCGATGGGAAAGACATAAGGAGATTAAACTTGAAGTCTCTAAGG
CTTAAAATTGGTTTGGTGCAACAAGAGCCAGCTCTGTTTGCAGCTAGCATTTTTGAAAAT
ATTGCCTATGGTAAAGAGGGTGCAACAGAAGCCGAAGTCATTGAAGCAGCTCGCGCAGCA
AATGTACACACTTTCGTAAGTGGTTTGCCTGAAGGTTACAAAACCCCTGTTGGTGAGAGA
GGTGTTCAACTCTCTGGAGGACAAAAACAAAGGATTGCAATAGCAAGGGCCGTTCTTAAA
GATCCATCGATTCTACTACTTGATGAGGCTACAAGTGCACTGGATGCTGAATCCGAATGT
GTGTTACAAGAAGCACTCGAGAGGTTGATGAGAGGTCGAACCACCGTTTTGGTGGCTCAC
CGATTATCAACAATTCGAAATGTGGATACTATTGGAGTTGTGCAAGACGGACGAATCGTT
GAACAAGGAAGCCATTCTGAGTTAATCAGCAGGCCAGAAGGTGCATATTCTAGACTACTG
CAACTACAACACCACCGCATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002561
PEP Infomation

pacid=37428787 transcript=PGSC0003DMT400003589 locus=PGSC0003DMG400001419 ID=PGSC0003DMT400003589.v4.03 annot-version=v4.03
Sequence

MAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQSDGGKAFTAIFSAIVGGMSLGQSFSNL
GAFSKGKAAGYKLMEIIRQKPTIVQDTLDGKCLSEVSGNIEFKNVTFSYPSRPDVIIFRD
FNIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNDGQVLLDNVDIKTLQLRWLRDQIGL
VNQEPALFATTILENILYGKPDATMAEVEAATCASNAHSFITLLPNGYNTQVGERGVQLS
GGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTI
RNVDSIAVIQQGQVVETGTHEELISKAGAYASLIRFQEMVGNRDFSNPSTRRTRSTRLSH
SLSTKSLSLRSGSLRNLSYSYSTGADGRIEMISNAETDRKNPAPQNYFCRLLKLNAPEWP
YSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYTNPATMERKTKEYVFIYIGAGLYAVVAY
LIQHYFFSIMGENLTTRVRRMMLSAILRNEVGWFDEEENNSSLLAARLATDAADVKSAIA
ERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAH
AKTSMIAGEGVSNIRTVAAFNAQEKIISLFSQELRVPQMQSLRRSQMSGLLFGISQLALY
GSEALILWYGAHLVNNGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFS
ILDRSTRVDPDDPEADPVESIRGDIELRHVDFAYPSRPDVSVFKDLNLRIRAGQSQALVG
ASGSGKSSVIALIERFYDPTGGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASIFEN
IAYGKEGATEAEVIEAARAANVHTFVSGLPEGYKTPVGERGVQLSGGQKQRIAIARAVLK
DPSILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRNVDTIGVVQDGRIV
EQGSHSELISRPEGAYSRLLQLQHHRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400003589
Transcript Infomation

pacid=37428787 locus=PGSC0003DMG400001419 ID=PGSC0003DMT400003589.v4.03 annot-version=v4.03
Sequence

ATGGCTAAAGGATTGGGTTTGGGATGTACCTACGGAATAGCATGCATGTCATGGGCCCTT
GTTTTTTGGTATGCTGGGGTTTTCATTAGGAATGGACAGAGTGATGGTGGAAAGGCATTT
ACTGCTATTTTCTCAGCCATTGTTGGTGGCATGAGTTTAGGTCAGTCATTTTCCAATCTT
GGGGCATTCAGCAAAGGAAAAGCAGCTGGATACAAGTTAATGGAAATTATTAGGCAGAAA
CCGACCATTGTGCAAGATACTCTAGATGGGAAATGCCTGTCTGAGGTCAGCGGGAACATT
GAATTCAAAAATGTGACCTTCAGCTATCCGTCAAGACCTGATGTGATTATCTTCAGAGAT
TTCAACATTTTCTTCCCTGCTGGAAAAACAGTTGCCGTGGTTGGTGGCAGTGGCTCAGGA
AAAAGCACAGTCGTCTCATTGATAGAAAGATTTTATGATCCTAATGATGGTCAAGTTTTG
CTTGACAATGTGGACATAAAGACGTTACAACTTAGATGGTTGCGTGATCAGATTGGCCTT
GTAAATCAAGAGCCTGCGTTATTTGCTACTACCATACTCGAGAACATTCTGTACGGAAAG
CCTGATGCAACCATGGCTGAAGTTGAGGCGGCTACCTGCGCTTCCAATGCACATAGCTTT
ATTACCTTGCTTCCTAACGGATACAACACCCAGGTGGGAGAGCGTGGTGTACAACTCTCT
GGTGGACAGAAACAGAGAATTGCAATTGCAAGAGCTATGTTAAAGAACCCGAAGATCCTC
CTGCTTGATGAGGCCACCAGTGCTCTTGATGCTGGTTCCGAAAGCATTGTCCAGGAAGCT
CTAGACCGTCTCATGGTTGGCCGTACTACTGTGGTTGTAGCTCACCGTCTCTCCACAATT
AGAAATGTCGATTCAATTGCAGTTATACAGCAAGGGCAGGTGGTTGAGACTGGAACACAT
GAAGAACTGATTTCCAAAGCTGGGGCTTATGCTTCTTTAATCAGATTCCAGGAAATGGTT
GGGAACAGAGACTTTTCAAATCCATCTACTCGCCGTACTCGTTCAACTCGGTTAAGTCAT
TCATTATCAACAAAGTCTCTAAGCCTTCGCTCTGGAAGTTTAAGGAATTTGAGCTATTCA
TACAGTACCGGTGCAGATGGGCGTATAGAAATGATCTCTAATGCTGAAACAGATAGGAAA
AATCCTGCTCCACAGAATTATTTCTGCCGGCTTCTCAAACTGAATGCGCCTGAGTGGCCT
TATTCAATCATGGGGGCCGTAGGGTCTGTCCTCTCCGGTTTCATTGGTCCAACTTTTGCT
ATTGTGATGAGCAACATGATTGAGGTATTCTACTATACAAATCCCGCAACCATGGAAAGA
AAGACGAAGGAATATGTCTTCATCTACATTGGAGCGGGTCTTTATGCCGTTGTAGCATAT
TTAATACAGCATTACTTCTTCAGTATTATGGGAGAAAACCTCACTACCAGGGTTCGGAGG
ATGATGTTGTCAGCAATTTTAAGGAATGAAGTCGGTTGGTTCGACGAGGAGGAGAACAAT
TCAAGTCTACTAGCAGCTCGTTTAGCTACAGATGCTGCAGATGTTAAATCTGCTATAGCG
GAGAGGATCTCCGTTATACTGCAGAATATGACATCTCTTCTCACTTCATTCATAGTTGCA
TTTATAGTCGAATGGCGGGTCTCACTGCTCATCCTCGCCACATTTCCGCTTCTCGTCTTG
GCCAATTTCGCTCAGCAACTCTCACTGAAAGGATTTGCTGGAGACACGGCCAAGGCGCAT
GCGAAGACTAGCATGATTGCTGGAGAAGGAGTAAGCAATATTAGAACTGTAGCAGCCTTC
AATGCCCAAGAGAAGATTATCTCTTTGTTCTCCCAAGAGCTTCGAGTTCCACAAATGCAG
AGTCTTCGACGAAGCCAAATGTCAGGACTCTTATTTGGTATATCACAGCTTGCTCTTTAT
GGTTCTGAAGCTTTGATTCTTTGGTATGGTGCACACCTTGTTAACAACGGGGTCTCGACT
TTCTCTAAGGTGATTAAGGTCTTTGTAGTCCTTGTGATCACAGCTAATTCAGTCGCTGAA
ACCGTCAGCCTAGCACCCGAGATTATTAGGGGTGGTGAAGCTGTTGGTTCAGTATTTTCT
ATTCTTGATCGCTCTACCAGGGTCGATCCTGATGACCCTGAAGCCGATCCAGTTGAATCA
ATTAGAGGGGATATTGAACTCCGTCATGTTGATTTTGCATACCCTTCACGACCGGATGTC
TCTGTGTTCAAGGACCTCAATCTAAGGATTCGCGCTGGCCAAAGCCAAGCTCTTGTTGGG
GCAAGTGGGTCGGGAAAGAGCTCCGTTATAGCCTTAATCGAAAGGTTCTATGACCCAACC
GGTGGAAAAGTTATGATCGATGGGAAAGACATAAGGAGATTAAACTTGAAGTCTCTAAGG
CTTAAAATTGGTTTGGTGCAACAAGAGCCAGCTCTGTTTGCAGCTAGCATTTTTGAAAAT
ATTGCCTATGGTAAAGAGGGTGCAACAGAAGCCGAAGTCATTGAAGCAGCTCGCGCAGCA
AATGTACACACTTTCGTAAGTGGTTTGCCTGAAGGTTACAAAACCCCTGTTGGTGAGAGA
GGTGTTCAACTCTCTGGAGGACAAAAACAAAGGATTGCAATAGCAAGGGCCGTTCTTAAA
GATCCATCGATTCTACTACTTGATGAGGCTACAAGTGCACTGGATGCTGAATCCGAATGT
GTGTTACAAGAAGCACTCGAGAGGTTGATGAGAGGTCGAACCACCGTTTTGGTGGCTCAC
CGATTATCAACAATTCGAAATGTGGATACTATTGGAGTTGTGCAAGACGGACGAATCGTT
GAACAAGGAAGCCATTCTGAGTTAATCAGCAGGCCAGAAGGTGCATATTCTAGACTACTG
CAACTACAACACCACCGCATATGA