Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003559
CDS Infomation

pacid=37427312 polypeptide=PGSC0003DMP400002540 locus=PGSC0003DMG400001407 ID=PGSC0003DMT400003559.v4.03 annot-version=v4.03
Sequence

ATGACAGCATCATTGACTGAATTAGGGTCCAAGTTTGCTGGACTGATGTTCATTTGGGCC
ACAATTCAGCAATCATTTCCCTATGCACTCAGCAAGCGCTTCGATTACTTATGGCGCAGA
GTAGAAAATTACTTCTACCCTTACGTACAAATTACCATTGATGAATTTTCAAATGGTAAA
CGAAACGAAATCTACAGTCATATCAACTCTTATTTGGGTACTAAGTCCATCAAAAAGGAT
GCTAAGTTGCTCAAAGTTGAAAAGTCTAAGAACAGCAAGTCTTTTGCTGTTAGCTTGGAT
GAAGGAGAAGAAATTACTGATGAATTTCAAGGTGCTAAATTCAGTTGGCGCAATTACTCT
GTAAAATTGTCCGATGATTCTTCAGGTCATCGGTCTAGCCGGTCTAATTCCGTTCCAATG
GAAAAGAAAAGTTACAAATTAACTTTCAATCAACGAGACAGAGAAATTGTTACCGGAAAA
TACTTGAACCATATCACGGAAGAAGGCAAGGCGATTCAGTTCCAGAACAGGAAACAGAAG
ATTTACTCAAACAATTGTAGTGATGATTGGTATTGGTATGGTAAAGGTATGTGGAGAGAC
ATCAATTTTGAGCACCCTGCAACATTTGATACTCTGGCTATGGACCCTAAGAAGAAAGCG
GAAATAATCAACGATCTCATTGCGTTCAGCAACGGGAAGGATTATTATTCCAAGGTTGGA
AAGGCGTGGAAGCGCGGGTATCTTCTTTATGGTCCACCAGGAACTGGAAAATCAACTATG
ATTGCAGCTATTGCGAATTACTTGAATTATGATATTTATGATCTTGAGCTCACCTCTGTT
AAGGATAACTCAGGGCTTAAGAAATTGCTCATGGAAACAACGAGCAAGTCCATCATTGTC
ATTGAAGATATTGATTGTTCTATCGATCTCACCGGCAAGAGAAAGAAGAAAAAGAAAAAG
GAAAAGGAAACAACCAGTGAAGATCAGGAAGAAGATTCGGACTCCTCTACAGAAAAAGAA
AAAGAAAGTACAGAAAACAAGGAATCAGGCAAACTCACACTTTCCGGGCTGTTGAATTTC
ATCGACGGAATATGGTCAGCTTGTGGTCAAGAAAGGATTATTATATTTACGACGAATCAC
AAGGACAAACTTGATCCAGCTCTAATACGACGAGGACGTATGGATATGCACATTGAGATG
TCTTATTGCAAATATGAAGCATTCAAAGTGTTGGCTAAGAATTACTTGAATTTGGAAACA
CACACTCTGTTTCAACAGATTCAAGGTTTACTCGAGGAAGTAGATATGAGTCCTTGTGAT
GTGGCTGAGCACTTGATGCTTAAGAATGCTTCTGGAGGGCCTCAAATTTGCTTGGATAAC
TTAATTCAAGCTTTGAAAGACGCCAAGAAGAAGGCAAATAAAGATTCAAAAGAATCCAAG
GAAAAAGCCAAGCAGAATTCCATGAAAATTAAGAAGTTCTCAGCAAAATTTCTCACAAGT
TTTGGCAACCTACAAAAGTTGCTCAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002540
PEP Infomation

pacid=37427312 transcript=PGSC0003DMT400003559 locus=PGSC0003DMG400001407 ID=PGSC0003DMT400003559.v4.03 annot-version=v4.03
Sequence

MTASLTELGSKFAGLMFIWATIQQSFPYALSKRFDYLWRRVENYFYPYVQITIDEFSNGK
RNEIYSHINSYLGTKSIKKDAKLLKVEKSKNSKSFAVSLDEGEEITDEFQGAKFSWRNYS
VKLSDDSSGHRSSRSNSVPMEKKSYKLTFNQRDREIVTGKYLNHITEEGKAIQFQNRKQK
IYSNNCSDDWYWYGKGMWRDINFEHPATFDTLAMDPKKKAEIINDLIAFSNGKDYYSKVG
KAWKRGYLLYGPPGTGKSTMIAAIANYLNYDIYDLELTSVKDNSGLKKLLMETTSKSIIV
IEDIDCSIDLTGKRKKKKKKEKETTSEDQEEDSDSSTEKEKESTENKESGKLTLSGLLNF
IDGIWSACGQERIIIFTTNHKDKLDPALIRRGRMDMHIEMSYCKYEAFKVLAKNYLNLET
HTLFQQIQGLLEEVDMSPCDVAEHLMLKNASGGPQICLDNLIQALKDAKKKANKDSKESK
EKAKQNSMKIKKFSAKFLTSFGNLQKLLK*

Transcript Sequence

Transcript ID

PGSC0003DMT400003559
Transcript Infomation

pacid=37427312 locus=PGSC0003DMG400001407 ID=PGSC0003DMT400003559.v4.03 annot-version=v4.03
Sequence

ATGACAGCATCATTGACTGAATTAGGGTCCAAGTTTGCTGGACTGATGTTCATTTGGGCC
ACAATTCAGCAATCATTTCCCTATGCACTCAGCAAGCGCTTCGATTACTTATGGCGCAGA
GTAGAAAATTACTTCTACCCTTACGTACAAATTACCATTGATGAATTTTCAAATGGTAAA
CGAAACGAAATCTACAGTCATATCAACTCTTATTTGGGTACTAAGTCCATCAAAAAGGAT
GCTAAGTTGCTCAAAGTTGAAAAGTCTAAGAACAGCAAGTCTTTTGCTGTTAGCTTGGAT
GAAGGAGAAGAAATTACTGATGAATTTCAAGGTGCTAAATTCAGTTGGCGCAATTACTCT
GTAAAATTGTCCGATGATTCTTCAGGTCATCGGTCTAGCCGGTCTAATTCCGTTCCAATG
GAAAAGAAAAGTTACAAATTAACTTTCAATCAACGAGACAGAGAAATTGTTACCGGAAAA
TACTTGAACCATATCACGGAAGAAGGCAAGGCGATTCAGTTCCAGAACAGGAAACAGAAG
ATTTACTCAAACAATTGTAGTGATGATTGGTATTGGTATGGTAAAGGTATGTGGAGAGAC
ATCAATTTTGAGCACCCTGCAACATTTGATACTCTGGCTATGGACCCTAAGAAGAAAGCG
GAAATAATCAACGATCTCATTGCGTTCAGCAACGGGAAGGATTATTATTCCAAGGTTGGA
AAGGCGTGGAAGCGCGGGTATCTTCTTTATGGTCCACCAGGAACTGGAAAATCAACTATG
ATTGCAGCTATTGCGAATTACTTGAATTATGATATTTATGATCTTGAGCTCACCTCTGTT
AAGGATAACTCAGGGCTTAAGAAATTGCTCATGGAAACAACGAGCAAGTCCATCATTGTC
ATTGAAGATATTGATTGTTCTATCGATCTCACCGGCAAGAGAAAGAAGAAAAAGAAAAAG
GAAAAGGAAACAACCAGTGAAGATCAGGAAGAAGATTCGGACTCCTCTACAGAAAAAGAA
AAAGAAAGTACAGAAAACAAGGAATCAGGCAAACTCACACTTTCCGGGCTGTTGAATTTC
ATCGACGGAATATGGTCAGCTTGTGGTCAAGAAAGGATTATTATATTTACGACGAATCAC
AAGGACAAACTTGATCCAGCTCTAATACGACGAGGACGTATGGATATGCACATTGAGATG
TCTTATTGCAAATATGAAGCATTCAAAGTGTTGGCTAAGAATTACTTGAATTTGGAAACA
CACACTCTGTTTCAACAGATTCAAGGTTTACTCGAGGAAGTAGATATGAGTCCTTGTGAT
GTGGCTGAGCACTTGATGCTTAAGAATGCTTCTGGAGGGCCTCAAATTTGCTTGGATAAC
TTAATTCAAGCTTTGAAAGACGCCAAGAAGAAGGCAAATAAAGATTCAAAAGAATCCAAG
GAAAAAGCCAAGCAGAATTCCATGAAAATTAAGAAGTTCTCAGCAAAATTTCTCACAAGT
TTTGGCAACCTACAAAAGTTGCTCAAATGA