Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003558
CDS Infomation

pacid=37424719 polypeptide=PGSC0003DMP400002539 locus=PGSC0003DMG400001406 ID=PGSC0003DMT400003558.v4.03 annot-version=v4.03
Sequence

ATGGTAGATACATTGACTGAATTATGCTCCAAGCTTGCTGGACTGATGTTCATTTTGGGC
ACAATTCAGCAACTTGTCCCCCGTTCTTTCTACAAACGCATCAAAGCATTGTGGCATCGA
ATCGAAAATTATTTCTACCCTTATGTCCAAATTACCATCGATGAATACTCCAACAATAAA
AGAAATGAAGTCTACTCTCTTATCAAAGTTTATTTAGGTACTAAGTCCACTAACGATGCA
AAGTATCTTAAAGCTGAAATGTTCAAGAAGAGCAAGTCTTTAGCTGTTAGTTTGGACGAA
GGAGAAGAGGTAATTGATGAATTCCATGGTGTCAAGCTTAAATGGAACTCTTACAAGGAA
ACATTCCCTGATAATTCTCCAGGGGGACGTTCTCAACTTCCGATTGAAAAGAAATGTTAT
ACGCTAACTTTCGATAAGAAAAATCAAGATATGGTCACTGGACAATATTTGAGACATGTG
ATGGAAGAAGGCAAGGCCATTGAGTTCAAGAACAAGAAGCAGAAGATCTACTCTAACGAA
GAGGGGGAGTGGCATTGGTATGGTAAAGGTATGTGGAGGCACATCAATTTCGAGCACCCT
GCAACATTTGATACTCTCGCTATGGATCCTACGAAGAAGGAAGAAATAATCAATGATCTC
GTTGCTTTCAGCAAGGGGAAGGACTACTATTCCAAGGTTGGAAAGGCGTGGAAGCGCGGC
TACCTTCTTTATGGTCCACCAGGAACTGGAAAATCAACTATGATTGCAGCTATTGCGAAT
TTCTTGAACTATGATATTTATGATCTTGAGCTAACCACTGTTAAGGATAACTTAGAACTT
AAGAAGTTGCTCATGGAAACAACAAGCAAGTCCATCATTGTCATTGAAGATGTCGATTGT
TCTATCGATCTCACAGGCAAGAGAAAGAAGAAAAAGAAAAAGGAAACGACGAATGAGGAG
GAGGAAGAAGATTCAGACTCGACTACAGAGAAAAAGAGCGACAAGAATGAATCAGGCAAA
CTTACTCTTTCGGGGCTGCTGAATTTTATAGATGGAATATGGTCAGCTTGTGGTCAAGAG
AGAATTATTATATTTACGACTAATCATGTTGACAAACTTGATCCAGCTCTGATACGTAGA
GGACGGATGGATATGCACATTGAGATGTCGTATTGCAAATATGAAGCATTCAAAGTGTTG
GCTAAGAATTACTTGGGAATTGAAACACATCCTCTGTTTCAAGAGATTCAACGTTTATTA
CAGGAAGTAGACGTGAGTCCTTGTGATGTGGCTGAGAACTTGATGCCCAAAAATGCTTCA
GGAAAGCCTGAGATTTGCTTGGAAAACTTAATCAAAGTTTTGAAAAAGGCCAAGAGAAAG
GCAAGCTTGAATTCCCAGAAGAACAAAAAATCCTCCACAAAATTAGTAAAAACTTATGGC
CGTTTCAAAAAGCTGTTTGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002539
PEP Infomation

pacid=37424719 transcript=PGSC0003DMT400003558 locus=PGSC0003DMG400001406 ID=PGSC0003DMT400003558.v4.03 annot-version=v4.03
Sequence

MVDTLTELCSKLAGLMFILGTIQQLVPRSFYKRIKALWHRIENYFYPYVQITIDEYSNNK
RNEVYSLIKVYLGTKSTNDAKYLKAEMFKKSKSLAVSLDEGEEVIDEFHGVKLKWNSYKE
TFPDNSPGGRSQLPIEKKCYTLTFDKKNQDMVTGQYLRHVMEEGKAIEFKNKKQKIYSNE
EGEWHWYGKGMWRHINFEHPATFDTLAMDPTKKEEIINDLVAFSKGKDYYSKVGKAWKRG
YLLYGPPGTGKSTMIAAIANFLNYDIYDLELTTVKDNLELKKLLMETTSKSIIVIEDVDC
SIDLTGKRKKKKKKETTNEEEEEDSDSTTEKKSDKNESGKLTLSGLLNFIDGIWSACGQE
RIIIFTTNHVDKLDPALIRRGRMDMHIEMSYCKYEAFKVLAKNYLGIETHPLFQEIQRLL
QEVDVSPCDVAENLMPKNASGKPEICLENLIKVLKKAKRKASLNSQKNKKSSTKLVKTYG
RFKKLFE*

Transcript Sequence

Transcript ID

PGSC0003DMT400003558
Transcript Infomation

pacid=37424719 locus=PGSC0003DMG400001406 ID=PGSC0003DMT400003558.v4.03 annot-version=v4.03
Sequence

ATGGTAGATACATTGACTGAATTATGCTCCAAGCTTGCTGGACTGATGTTCATTTTGGGC
ACAATTCAGCAACTTGTCCCCCGTTCTTTCTACAAACGCATCAAAGCATTGTGGCATCGA
ATCGAAAATTATTTCTACCCTTATGTCCAAATTACCATCGATGAATACTCCAACAATAAA
AGAAATGAAGTCTACTCTCTTATCAAAGTTTATTTAGGTACTAAGTCCACTAACGATGCA
AAGTATCTTAAAGCTGAAATGTTCAAGAAGAGCAAGTCTTTAGCTGTTAGTTTGGACGAA
GGAGAAGAGGTAATTGATGAATTCCATGGTGTCAAGCTTAAATGGAACTCTTACAAGGAA
ACATTCCCTGATAATTCTCCAGGGGGACGTTCTCAACTTCCGATTGAAAAGAAATGTTAT
ACGCTAACTTTCGATAAGAAAAATCAAGATATGGTCACTGGACAATATTTGAGACATGTG
ATGGAAGAAGGCAAGGCCATTGAGTTCAAGAACAAGAAGCAGAAGATCTACTCTAACGAA
GAGGGGGAGTGGCATTGGTATGGTAAAGGTATGTGGAGGCACATCAATTTCGAGCACCCT
GCAACATTTGATACTCTCGCTATGGATCCTACGAAGAAGGAAGAAATAATCAATGATCTC
GTTGCTTTCAGCAAGGGGAAGGACTACTATTCCAAGGTTGGAAAGGCGTGGAAGCGCGGC
TACCTTCTTTATGGTCCACCAGGAACTGGAAAATCAACTATGATTGCAGCTATTGCGAAT
TTCTTGAACTATGATATTTATGATCTTGAGCTAACCACTGTTAAGGATAACTTAGAACTT
AAGAAGTTGCTCATGGAAACAACAAGCAAGTCCATCATTGTCATTGAAGATGTCGATTGT
TCTATCGATCTCACAGGCAAGAGAAAGAAGAAAAAGAAAAAGGAAACGACGAATGAGGAG
GAGGAAGAAGATTCAGACTCGACTACAGAGAAAAAGAGCGACAAGAATGAATCAGGCAAA
CTTACTCTTTCGGGGCTGCTGAATTTTATAGATGGAATATGGTCAGCTTGTGGTCAAGAG
AGAATTATTATATTTACGACTAATCATGTTGACAAACTTGATCCAGCTCTGATACGTAGA
GGACGGATGGATATGCACATTGAGATGTCGTATTGCAAATATGAAGCATTCAAAGTGTTG
GCTAAGAATTACTTGGGAATTGAAACACATCCTCTGTTTCAAGAGATTCAACGTTTATTA
CAGGAAGTAGACGTGAGTCCTTGTGATGTGGCTGAGAACTTGATGCCCAAAAATGCTTCA
GGAAAGCCTGAGATTTGCTTGGAAAACTTAATCAAAGTTTTGAAAAAGGCCAAGAGAAAG
GCAAGCTTGAATTCCCAGAAGAACAAAAAATCCTCCACAAAATTAGTAAAAACTTATGGC
CGTTTCAAAAAGCTGTTTGAATGA