Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003550
CDS Infomation

pacid=37425375 polypeptide=PGSC0003DMP400002535 locus=PGSC0003DMG400001402 ID=PGSC0003DMT400003550.v4.03 annot-version=v4.03
Sequence

ATGGAGGCTGTGAAGAAAGCATATGCGGGGATAATTTTGAACATGGCAAAGGAGGCGGCA
GCTCGTGTTATGGCATCGGAGAAAAAAGCTCTTAAGTTTCAGCAGGATCTGCATTCTACG
AAAGAGGAAGCCCTTCGTATGCTGCTTCGTTTGAAATTAATCATTGATGCTAAGACAACT
GAAGCTGAGAGTTTGTCTCAAAATCAACAAAGAAGAATTGATGAATTAGAAGCTCAGCTT
AATGAAGCTGAAGGGCTGATAATTGATCTTAGAGCAGAATTGCATGATGTGCATGAACAG
TTGAATGAAGCAAAAAATAAGCCTCTCCATCACCTGAGACCACATGCAAAAGAGGATTTG
GTTTGTCACAACAGTATCATGGCCAAGTCAAATGTAAATAATTCAGAGTCGTTAAAATTC
CCTACCGAATTGGGATCCAAGGTCTGCAAATCAGCAGACATGTCAGACACAGCATTGTGC
AATTACTCAAAGGACAACCTTAATGAGCCAGAGATTTATAAAAATGGATGGTGTGCAATA
GCGATGAGCTTAGCAGATGAGAGATTGCATTCTGGAGGTGATCCAAGTTTTCCCATTAAA
GTTACACAGGTCACTGAACCTAGTGGGCGAGATGGTGAAGCACATATTGCACCATCATCT
AAAGCTATGAAAGCAGAGAATTTAGTTGGTGAAGAACAACTTAAGGGCCATGACTCTATG
CAGCGGCCCTATACATTCCTAGGAAAAAGGCGAAGAAAAGCTCGATATGGCAAAACCAAA
AATAGCTTTTGCAAGGCTCGTTGTAATAAGCTGGTGTTTTCTCAACGACCATTGCCAGCA
ATTTCTCGCTGTTCTGCAAGATACTTGCACACAGACACTTTGTATGACAGTCCTAATAGG
CCTTCCACCAATACTGAGAGAAATAATGTAGTAGGAAGTTCTTTTGTGTCAGGTAAAGAA
GGGCCACAAAACAAGGGACTAAACATTGCTGTTGCTCGTAGAAGCATTAGGAAAAGACGC
GTCAAATACCTGGACGTTAGTTACCCTCCATCATTGTCACATAGCTCCCTCTCTAATCAG
CCAATGAGACCTGGACTGCAATTTCCATCTTTTTCTAATAGCAAGTTCAGTGCAGCTGAA
TGCACTGTGAAATCCACGAAATTAGGAGGTGAAGGTGGTATTGAAGAGGGTACTAGTTTT
CAAGCGGCATCCTTAGGTTTCACTGTAGAAAACATGATATGTAGAAAGTTTGCATGTGCA
GATAATGATGCACACAAGGACGACACAGAATTGATAGATGTCTCAGTGATGGTAGAGGAG
GGTGATGATCAACCGCTGCTCAACTTCGGCGTGTTACCAGTTGAATCTATCCTTGGAGAT
ACCAAAGCATCTGAAGGAAGTAAGGAATCAAATCTTCAAGGTAACAATATGACGCCTCTC
AAGTATACGTTCAGCAGGAAGCGTAAGAAAGATAACTTGTTGAACCCAAATGAGAACTCT
TCTCCAGATTGCTCAGTGAAGAAAAAGTCTGTAGAGATAGAAAACATTGATCCAAGATTG
CAGGATTCAGAAGCGTTGAAAGATTCGCCTTTAAGAAGTAAACATTTGGTCCAGGTTGCT
CATCAGCTTATCTCTCTGTCTGGAAGAAGCTGGTGGCATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400002535
PEP Infomation

pacid=37425375 transcript=PGSC0003DMT400003550 locus=PGSC0003DMG400001402 ID=PGSC0003DMT400003550.v4.03 annot-version=v4.03
Sequence

MEAVKKAYAGIILNMAKEAAARVMASEKKALKFQQDLHSTKEEALRMLLRLKLIIDAKTT
EAESLSQNQQRRIDELEAQLNEAEGLIIDLRAELHDVHEQLNEAKNKPLHHLRPHAKEDL
VCHNSIMAKSNVNNSESLKFPTELGSKVCKSADMSDTALCNYSKDNLNEPEIYKNGWCAI
AMSLADERLHSGGDPSFPIKVTQVTEPSGRDGEAHIAPSSKAMKAENLVGEEQLKGHDSM
QRPYTFLGKRRRKARYGKTKNSFCKARCNKLVFSQRPLPAISRCSARYLHTDTLYDSPNR
PSTNTERNNVVGSSFVSGKEGPQNKGLNIAVARRSIRKRRVKYLDVSYPPSLSHSSLSNQ
PMRPGLQFPSFSNSKFSAAECTVKSTKLGGEGGIEEGTSFQAASLGFTVENMICRKFACA
DNDAHKDDTELIDVSVMVEEGDDQPLLNFGVLPVESILGDTKASEGSKESNLQGNNMTPL
KYTFSRKRKKDNLLNPNENSSPDCSVKKKSVEIENIDPRLQDSEALKDSPLRSKHLVQVA
HQLISLSGRSWWH*

Transcript Sequence

Transcript ID

PGSC0003DMT400003550
Transcript Infomation

pacid=37425375 locus=PGSC0003DMG400001402 ID=PGSC0003DMT400003550.v4.03 annot-version=v4.03
Sequence

ATGGAGGCTGTGAAGAAAGCATATGCGGGGATAATTTTGAACATGGCAAAGGAGGCGGCA
GCTCGTGTTATGGCATCGGAGAAAAAAGCTCTTAAGTTTCAGCAGGATCTGCATTCTACG
AAAGAGGAAGCCCTTCGTATGCTGCTTCGTTTGAAATTAATCATTGATGCTAAGACAACT
GAAGCTGAGAGTTTGTCTCAAAATCAACAAAGAAGAATTGATGAATTAGAAGCTCAGCTT
AATGAAGCTGAAGGGCTGATAATTGATCTTAGAGCAGAATTGCATGATGTGCATGAACAG
TTGAATGAAGCAAAAAATAAGCCTCTCCATCACCTGAGACCACATGCAAAAGAGGATTTG
GTTTGTCACAACAGTATCATGGCCAAGTCAAATGTAAATAATTCAGAGTCGTTAAAATTC
CCTACCGAATTGGGATCCAAGGTCTGCAAATCAGCAGACATGTCAGACACAGCATTGTGC
AATTACTCAAAGGACAACCTTAATGAGCCAGAGATTTATAAAAATGGATGGTGTGCAATA
GCGATGAGCTTAGCAGATGAGAGATTGCATTCTGGAGGTGATCCAAGTTTTCCCATTAAA
GTTACACAGGTCACTGAACCTAGTGGGCGAGATGGTGAAGCACATATTGCACCATCATCT
AAAGCTATGAAAGCAGAGAATTTAGTTGGTGAAGAACAACTTAAGGGCCATGACTCTATG
CAGCGGCCCTATACATTCCTAGGAAAAAGGCGAAGAAAAGCTCGATATGGCAAAACCAAA
AATAGCTTTTGCAAGGCTCGTTGTAATAAGCTGGTGTTTTCTCAACGACCATTGCCAGCA
ATTTCTCGCTGTTCTGCAAGATACTTGCACACAGACACTTTGTATGACAGTCCTAATAGG
CCTTCCACCAATACTGAGAGAAATAATGTAGTAGGAAGTTCTTTTGTGTCAGGTAAAGAA
GGGCCACAAAACAAGGGACTAAACATTGCTGTTGCTCGTAGAAGCATTAGGAAAAGACGC
GTCAAATACCTGGACGTTAGTTACCCTCCATCATTGTCACATAGCTCCCTCTCTAATCAG
CCAATGAGACCTGGACTGCAATTTCCATCTTTTTCTAATAGCAAGTTCAGTGCAGCTGAA
TGCACTGTGAAATCCACGAAATTAGGAGGTGAAGGTGGTATTGAAGAGGGTACTAGTTTT
CAAGCGGCATCCTTAGGTTTCACTGTAGAAAACATGATATGTAGAAAGTTTGCATGTGCA
GATAATGATGCACACAAGGACGACACAGAATTGATAGATGTCTCAGTGATGGTAGAGGAG
GGTGATGATCAACCGCTGCTCAACTTCGGCGTGTTACCAGTTGAATCTATCCTTGGAGAT
ACCAAAGCATCTGAAGGAAGTAAGGAATCAAATCTTCAAGGTAACAATATGACGCCTCTC
AAGTATACGTTCAGCAGGAAGCGTAAGAAAGATAACTTGTTGAACCCAAATGAGAACTCT
TCTCCAGATTGCTCAGTGAAGAAAAAGTCTGTAGAGATAGAAAACATTGATCCAAGATTG
CAGGATTCAGAAGCGTTGAAAGATTCGCCTTTAAGAAGTAAACATTTGGTCCAGGTTGCT
CATCAGCTTATCTCTCTGTCTGGAAGAAGCTGGTGGCATTAG