Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003539
CDS Infomation

pacid=37427553 polypeptide=PGSC0003DMP400002527 locus=PGSC0003DMG400001397 ID=PGSC0003DMT400003539.v4.03 annot-version=v4.03
Sequence

ATGAAACGATTGAGAGATGATGGGTATGATAGCCCTTCATTTAAGCGGCCATTTGGTTCT
AACCGAGGAGAATCCTACAGTCCATCACAAGTTCCAGGAAGTGGTCCGGGTGGAGGAGGT
GGTGGCAGCAGTGCTGGTGGAGCTGGTGCTACTGCTAGTAACCCAAAGCTGACAACTGGT
GATGCGTTGTCTTATTTGAAGGAAGTCAAGGACATGTTTCAAAGCCAAAGGGATAAGTAT
GACATGTTCCTTGACGTTATGAAAGACTTTAAAGCTCAAAGAATTGATACTGTTGGTGTC
ATAGAAAGAGTAAAAGACTTGTTTAAAGGGCATCCTAGGTTGATCCTTGGATTCAACACT
TTCTTGCCCAAGGGTTATGAAATAACCCTCAATGATGAAGATGAGGCTCCTCCAAAGAAA
GTTGAGTTTGAAGAAGCTATTAGCTTTGTGAACAAAATAAAGACCCGTTTCCAAAATGAT
GATCACGTTTACAAATCCTTCCTAGATATTTTGAACATGTATAGGAAGGAGCACAAGGGA
ATCGATGAGGTGTACCGTGAGGTTGCCGTACTTTTTAGTGACCATCCAGATTTGCTAGAT
GAGTTCACTAGGTTCTTGCCAGATAATTCAGGAACTGCATCAGCAGCACAAACTTCAGTT
GGCAGGCCTTCATTCCATCGTTATGATGAGAGGAGCTCAGCTATGCCCATTCTTAGGCAA
TCACACATGGACAAGCGCTTCCGGCGGGATAGGATTATTGGTCCTTATGCTGAAAGAGAC
CTTAGCATTGAGCGGCCTGATTTGGACGACGAAAAAACAATGATAAAGTTGCATAAAGAG
CAAAAGAGACGTGCTGAAAAAGAGAGCAGGGACAGAAGAACTCATGATCAGGATTATAAA
GAACCTGATAATGAGAATAATGAAGATCTAAGCATGCAGCGTCACACTGATAAAAAGAAA
TCTGCTCGGAAGGTTGAAGAATTTGGAGGACCTCATGAAGATAAAGATGCCCTGAAAAAT
ATGTATAGCCAAGAGTTCAGCTTCTGTGAAAAGGTCAAGGAAAGACTACGAAGTCCAACT
GATTATCAGGCTTTCTTAAAATGTCTTCACATTTATAGCACAGAAATAATTACAAGGACC
GAGTTACAAAGTTTGGTTGCTGATCTGCTTGGAAAACATCCTGATCTTTTGGAAGGTTTT
GGTGAATTTCTAGAGCGTTGCGAACAAGATGATGGATTTCTTGAAGGTGTTATGAGGAAG
AGTAGGTGGAATGACGGGCATGCTTCCAAGTCAGTAAAGGACGATGGGAAAGACAAAGAG
CCGAAGCGTGAGACTGATGGAACTAAAGAAAAGGACCGATACAAGGAGAAATACTGGGGA
AAATCCATCCAAGAACTTGACCTCTCAAACTGCAAACGCTGCACGCCCAGTTATCGGCTT
CTCCCTGATGATTATCCAATACCTACAGCAAGCCAAAAATCCGAGCTTGGAGCTCAGGTG
TTAAATGACCACTGGGTTTCTGTGACTTCAGGGAGTGAGGACTACTCTTTCAAGCACATG
CGCAGAAATCAGTATGAAGAAAGCCTGTTCCGTTGTGAAGATGATAGGTTTGAGCTAGAC
ATGTTATTGGAGTCGGTGAGTTCAACTGCTAAGCGCGTAGAAGAGTTATTGAATGCCATT
AACGATAATTCAATTGGTGGGGCATTCCGTGTTGAGGACCACTTTACAGTCTTAAACTTA
AGATGCATTGAGCGAATCTATGGTGATCATGGTCTGGATACGGTGGATATTCTGCGTAAA
AATCCATCTCATGCGCTGCCTGTTATACTGACCCGCTTGAAGCAGAAACAGGAGGAGTGG
ACCAAGTGTCGCACAGATTTTAACAAAGTTTGGTCAGAGATCTATGCTAAGAACCATTAT
AAGTCACTTGACCATCGAAGTTTCTACTTCAAGCAACAAGATTCAAAGAATCTTGGCTCA
AAATCCTTACTAGTGGAGATCAAAGAAATTAAGGAGAACAAGCAGAAAGAAGACGACATG
ATTCTTTCTATTTCCGCTGGAAGTAGACATCCTATAACACCAAATCTTGAATTTGATTAT
ACTGACTCTGAGCTTCATGAAGACTTGTACAAACTTATCAAGTATTCGTGTGAAGAGGTT
TGCTCCTCCAAAGAGCAATTAGATAAAGTACTGGGGTTATGGACCAACTTTGTTGAGCAA
ATCTTGGGTGTTCCTTGTCGTCCTCATGACTCAGAGGCTACTGAGAATGATGTCTTATTG
AAGCCGCATGGCCCAAAAGTTGGTGGAACTAGCATTGATGAAAGTGATGGCAGTCCTAGT
GCAGATGCTATTACTAGGAATTGTAAACAATCAAAAGTTATCAGCAACAGAGATGCTAAT
GCTTCCCCCCTACGAATAACTCCTTCTAGGACAAGCTTTGCAAATGCAGATGCTCTCCCC
AAAGAAGATGGTTTGCCAGTGATTGGTGAGCACCTAACTAGTTCCGATGCAGCTCCTGCT
ATGGGAGCAGATACTGTTCATGGAAGAGTGGAAATAACTTCAGGGCGTGGTGCAAGACAG
GGCAATGGTGCTGCTGACGATGGTCAAGTATCCAAGTCTAACATCGATAATGTGCCAGCA
TCGGAGAGTGATACTTCAAGATCGATTCCGTTGGGTAATGGAGGGTTTGCAGAAGGCTCT
ACAATTAATGGGTACAATGATGATTCAGCTGATCCCTGTAAAAATGAGAAAGAAGAGGGT
GAGTTATCACCTAATGGTGATTTTGAAGAGGACAATTTTGTTGCCTTTAGAAGTGGTGCC
TCGCACAATGGAAGTGTGCAATATCAAACCAGAGGTGCTGAAGAGATTGGTTCTCAGGAT
GCTGCTGGTGAAAATGATGCAGATGCTGATGATGAAGATAGTGAAAATGTTTCTGAGGCT
GAAGAAGATGTTTCTGGCAGTGAGTCTGCTGCTGATGAGTGCTCTCGAGAAGAGCATGAG
GAAGAGGATGGCGGAGAGCATGATGAACTTGATGGTAAAGCTGAGAGTGAAGGTGAAGCT
GAGGGGACGAATGAAGCACACTATGCTGGAGGTGATGGCAATGTGTTGCAAATGTCTGAT
CGGGTTTTGCTTACTTCAAAGCCACTTACAAAATATGTGGCTTCACCTGTATATGAGGGA
GTGGTGAAGTACCCACGGGTATTCTATGGAAATGAGACATTCTATGTGCTTTTTAGGCTA
CAGCAGATTCTATATGAAAGGTTATTATCAGCAAAGCTGAATTCAGCATCGTCTGAGTCA
AAATGGAGAACTGGAAAGGATACTGGTTCTATTCCCTATGACAGATTCATGAGTGCGCTG
CATAGTTTGCTCGATGGTTCTGCAGAAAATTCAAAGTTCGAGGATGATTGCCGATCAATC
ATTGGAAATCAGTCATATGTGCTATTCACGTTGGACAAATTGATATATAAGCTGGTCAAA
CAGCTTCAAACAGTCTCGAGTGATGAGCTGGACTGTAAGCTGCTTCAGTTATATGAATAT
GAAAGATTAAGGAAACCTGAGAAGTTTGTTGATTCAGCTTATTATGAAAATGCTCATTTC
CTCCTCCAGGAGGACAGCATTTACCGGTTTGAATGTACGTCTTCGCCTACCCGTCTGTCC
ATCCAGTTGATGGATGATAGAGGTGACAAGTCTGAAGTAGTTGCAGTTGCTGTAGATCCC
AATTTTGCAGGTTATCTGCACAATGATTATCTGTCAGTTAAACATGGGAAAAAGGAGTCT
TCTGCAGTTCTGCTGAAGAGAAATAAGCGGAAACGTGCCGACAATGATGAATCAACTGCT
TTGTGCATGGCAATGGAACATGTTATTCTTGTAAATGGTCTGGAATGCAAGATGGCTTCA
AATTCATCGAAGATATCATATGTGCTTGACACAGAGGACTTCTTTTTTCGCCAGGGTGGT
AAAAGAAGAAAAGTTTCAGCTGGCAGATTGCCATGTGCTTACCAGGCTAGAGTAGAACGG
TTCCATCGTGTTCTGCTGTCATCTTTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002527
PEP Infomation

pacid=37427553 transcript=PGSC0003DMT400003539 locus=PGSC0003DMG400001397 ID=PGSC0003DMT400003539.v4.03 annot-version=v4.03
Sequence

MKRLRDDGYDSPSFKRPFGSNRGESYSPSQVPGSGPGGGGGGSSAGGAGATASNPKLTTG
DALSYLKEVKDMFQSQRDKYDMFLDVMKDFKAQRIDTVGVIERVKDLFKGHPRLILGFNT
FLPKGYEITLNDEDEAPPKKVEFEEAISFVNKIKTRFQNDDHVYKSFLDILNMYRKEHKG
IDEVYREVAVLFSDHPDLLDEFTRFLPDNSGTASAAQTSVGRPSFHRYDERSSAMPILRQ
SHMDKRFRRDRIIGPYAERDLSIERPDLDDEKTMIKLHKEQKRRAEKESRDRRTHDQDYK
EPDNENNEDLSMQRHTDKKKSARKVEEFGGPHEDKDALKNMYSQEFSFCEKVKERLRSPT
DYQAFLKCLHIYSTEIITRTELQSLVADLLGKHPDLLEGFGEFLERCEQDDGFLEGVMRK
SRWNDGHASKSVKDDGKDKEPKRETDGTKEKDRYKEKYWGKSIQELDLSNCKRCTPSYRL
LPDDYPIPTASQKSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELD
MLLESVSSTAKRVEELLNAINDNSIGGAFRVEDHFTVLNLRCIERIYGDHGLDTVDILRK
NPSHALPVILTRLKQKQEEWTKCRTDFNKVWSEIYAKNHYKSLDHRSFYFKQQDSKNLGS
KSLLVEIKEIKENKQKEDDMILSISAGSRHPITPNLEFDYTDSELHEDLYKLIKYSCEEV
CSSKEQLDKVLGLWTNFVEQILGVPCRPHDSEATENDVLLKPHGPKVGGTSIDESDGSPS
ADAITRNCKQSKVISNRDANASPLRITPSRTSFANADALPKEDGLPVIGEHLTSSDAAPA
MGADTVHGRVEITSGRGARQGNGAADDGQVSKSNIDNVPASESDTSRSIPLGNGGFAEGS
TINGYNDDSADPCKNEKEEGELSPNGDFEEDNFVAFRSGASHNGSVQYQTRGAEEIGSQD
AAGENDADADDEDSENVSEAEEDVSGSESAADECSREEHEEEDGGEHDELDGKAESEGEA
EGTNEAHYAGGDGNVLQMSDRVLLTSKPLTKYVASPVYEGVVKYPRVFYGNETFYVLFRL
QQILYERLLSAKLNSASSESKWRTGKDTGSIPYDRFMSALHSLLDGSAENSKFEDDCRSI
IGNQSYVLFTLDKLIYKLVKQLQTVSSDELDCKLLQLYEYERLRKPEKFVDSAYYENAHF
LLQEDSIYRFECTSSPTRLSIQLMDDRGDKSEVVAVAVDPNFAGYLHNDYLSVKHGKKES
SAVLLKRNKRKRADNDESTALCMAMEHVILVNGLECKMASNSSKISYVLDTEDFFFRQGG
KRRKVSAGRLPCAYQARVERFHRVLLSSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400003539
Transcript Infomation

pacid=37427553 locus=PGSC0003DMG400001397 ID=PGSC0003DMT400003539.v4.03 annot-version=v4.03
Sequence

ATGAAACGATTGAGAGATGATGGGTATGATAGCCCTTCATTTAAGCGGCCATTTGGTTCT
AACCGAGGAGAATCCTACAGTCCATCACAAGTTCCAGGAAGTGGTCCGGGTGGAGGAGGT
GGTGGCAGCAGTGCTGGTGGAGCTGGTGCTACTGCTAGTAACCCAAAGCTGACAACTGGT
GATGCGTTGTCTTATTTGAAGGAAGTCAAGGACATGTTTCAAAGCCAAAGGGATAAGTAT
GACATGTTCCTTGACGTTATGAAAGACTTTAAAGCTCAAAGAATTGATACTGTTGGTGTC
ATAGAAAGAGTAAAAGACTTGTTTAAAGGGCATCCTAGGTTGATCCTTGGATTCAACACT
TTCTTGCCCAAGGGTTATGAAATAACCCTCAATGATGAAGATGAGGCTCCTCCAAAGAAA
GTTGAGTTTGAAGAAGCTATTAGCTTTGTGAACAAAATAAAGACCCGTTTCCAAAATGAT
GATCACGTTTACAAATCCTTCCTAGATATTTTGAACATGTATAGGAAGGAGCACAAGGGA
ATCGATGAGGTGTACCGTGAGGTTGCCGTACTTTTTAGTGACCATCCAGATTTGCTAGAT
GAGTTCACTAGGTTCTTGCCAGATAATTCAGGAACTGCATCAGCAGCACAAACTTCAGTT
GGCAGGCCTTCATTCCATCGTTATGATGAGAGGAGCTCAGCTATGCCCATTCTTAGGCAA
TCACACATGGACAAGCGCTTCCGGCGGGATAGGATTATTGGTCCTTATGCTGAAAGAGAC
CTTAGCATTGAGCGGCCTGATTTGGACGACGAAAAAACAATGATAAAGTTGCATAAAGAG
CAAAAGAGACGTGCTGAAAAAGAGAGCAGGGACAGAAGAACTCATGATCAGGATTATAAA
GAACCTGATAATGAGAATAATGAAGATCTAAGCATGCAGCGTCACACTGATAAAAAGAAA
TCTGCTCGGAAGGTTGAAGAATTTGGAGGACCTCATGAAGATAAAGATGCCCTGAAAAAT
ATGTATAGCCAAGAGTTCAGCTTCTGTGAAAAGGTCAAGGAAAGACTACGAAGTCCAACT
GATTATCAGGCTTTCTTAAAATGTCTTCACATTTATAGCACAGAAATAATTACAAGGACC
GAGTTACAAAGTTTGGTTGCTGATCTGCTTGGAAAACATCCTGATCTTTTGGAAGGTTTT
GGTGAATTTCTAGAGCGTTGCGAACAAGATGATGGATTTCTTGAAGGTGTTATGAGGAAG
AGTAGGTGGAATGACGGGCATGCTTCCAAGTCAGTAAAGGACGATGGGAAAGACAAAGAG
CCGAAGCGTGAGACTGATGGAACTAAAGAAAAGGACCGATACAAGGAGAAATACTGGGGA
AAATCCATCCAAGAACTTGACCTCTCAAACTGCAAACGCTGCACGCCCAGTTATCGGCTT
CTCCCTGATGATTATCCAATACCTACAGCAAGCCAAAAATCCGAGCTTGGAGCTCAGGTG
TTAAATGACCACTGGGTTTCTGTGACTTCAGGGAGTGAGGACTACTCTTTCAAGCACATG
CGCAGAAATCAGTATGAAGAAAGCCTGTTCCGTTGTGAAGATGATAGGTTTGAGCTAGAC
ATGTTATTGGAGTCGGTGAGTTCAACTGCTAAGCGCGTAGAAGAGTTATTGAATGCCATT
AACGATAATTCAATTGGTGGGGCATTCCGTGTTGAGGACCACTTTACAGTCTTAAACTTA
AGATGCATTGAGCGAATCTATGGTGATCATGGTCTGGATACGGTGGATATTCTGCGTAAA
AATCCATCTCATGCGCTGCCTGTTATACTGACCCGCTTGAAGCAGAAACAGGAGGAGTGG
ACCAAGTGTCGCACAGATTTTAACAAAGTTTGGTCAGAGATCTATGCTAAGAACCATTAT
AAGTCACTTGACCATCGAAGTTTCTACTTCAAGCAACAAGATTCAAAGAATCTTGGCTCA
AAATCCTTACTAGTGGAGATCAAAGAAATTAAGGAGAACAAGCAGAAAGAAGACGACATG
ATTCTTTCTATTTCCGCTGGAAGTAGACATCCTATAACACCAAATCTTGAATTTGATTAT
ACTGACTCTGAGCTTCATGAAGACTTGTACAAACTTATCAAGTATTCGTGTGAAGAGGTT
TGCTCCTCCAAAGAGCAATTAGATAAAGTACTGGGGTTATGGACCAACTTTGTTGAGCAA
ATCTTGGGTGTTCCTTGTCGTCCTCATGACTCAGAGGCTACTGAGAATGATGTCTTATTG
AAGCCGCATGGCCCAAAAGTTGGTGGAACTAGCATTGATGAAAGTGATGGCAGTCCTAGT
GCAGATGCTATTACTAGGAATTGTAAACAATCAAAAGTTATCAGCAACAGAGATGCTAAT
GCTTCCCCCCTACGAATAACTCCTTCTAGGACAAGCTTTGCAAATGCAGATGCTCTCCCC
AAAGAAGATGGTTTGCCAGTGATTGGTGAGCACCTAACTAGTTCCGATGCAGCTCCTGCT
ATGGGAGCAGATACTGTTCATGGAAGAGTGGAAATAACTTCAGGGCGTGGTGCAAGACAG
GGCAATGGTGCTGCTGACGATGGTCAAGTATCCAAGTCTAACATCGATAATGTGCCAGCA
TCGGAGAGTGATACTTCAAGATCGATTCCGTTGGGTAATGGAGGGTTTGCAGAAGGCTCT
ACAATTAATGGGTACAATGATGATTCAGCTGATCCCTGTAAAAATGAGAAAGAAGAGGGT
GAGTTATCACCTAATGGTGATTTTGAAGAGGACAATTTTGTTGCCTTTAGAAGTGGTGCC
TCGCACAATGGAAGTGTGCAATATCAAACCAGAGGTGCTGAAGAGATTGGTTCTCAGGAT
GCTGCTGGTGAAAATGATGCAGATGCTGATGATGAAGATAGTGAAAATGTTTCTGAGGCT
GAAGAAGATGTTTCTGGCAGTGAGTCTGCTGCTGATGAGTGCTCTCGAGAAGAGCATGAG
GAAGAGGATGGCGGAGAGCATGATGAACTTGATGGTAAAGCTGAGAGTGAAGGTGAAGCT
GAGGGGACGAATGAAGCACACTATGCTGGAGGTGATGGCAATGTGTTGCAAATGTCTGAT
CGGGTTTTGCTTACTTCAAAGCCACTTACAAAATATGTGGCTTCACCTGTATATGAGGGA
GTGGTGAAGTACCCACGGGTATTCTATGGAAATGAGACATTCTATGTGCTTTTTAGGCTA
CAGCAGATTCTATATGAAAGGTTATTATCAGCAAAGCTGAATTCAGCATCGTCTGAGTCA
AAATGGAGAACTGGAAAGGATACTGGTTCTATTCCCTATGACAGATTCATGAGTGCGCTG
CATAGTTTGCTCGATGGTTCTGCAGAAAATTCAAAGTTCGAGGATGATTGCCGATCAATC
ATTGGAAATCAGTCATATGTGCTATTCACGTTGGACAAATTGATATATAAGCTGGTCAAA
CAGCTTCAAACAGTCTCGAGTGATGAGCTGGACTGTAAGCTGCTTCAGTTATATGAATAT
GAAAGATTAAGGAAACCTGAGAAGTTTGTTGATTCAGCTTATTATGAAAATGCTCATTTC
CTCCTCCAGGAGGACAGCATTTACCGGTTTGAATGTACGTCTTCGCCTACCCGTCTGTCC
ATCCAGTTGATGGATGATAGAGGTGACAAGTCTGAAGTAGTTGCAGTTGCTGTAGATCCC
AATTTTGCAGGTTATCTGCACAATGATTATCTGTCAGTTAAACATGGGAAAAAGGAGTCT
TCTGCAGTTCTGCTGAAGAGAAATAAGCGGAAACGTGCCGACAATGATGAATCAACTGCT
TTGTGCATGGCAATGGAACATGTTATTCTTGTAAATGGTCTGGAATGCAAGATGGCTTCA
AATTCATCGAAGATATCATATGTGCTTGACACAGAGGACTTCTTTTTTCGCCAGGGTGGT
AAAAGAAGAAAAGTTTCAGCTGGCAGATTGCCATGTGCTTACCAGGCTAGAGTAGAACGG
TTCCATCGTGTTCTGCTGTCATCTTTATGA