Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003533
CDS Infomation

pacid=37425433 polypeptide=PGSC0003DMP400002523 locus=PGSC0003DMG400001394 ID=PGSC0003DMT400003533.v4.03 annot-version=v4.03
Sequence

ATGGCCTTTTCCTCCCGCCGCGGCGGAACTGGGTGGGCCCATTCACTCCTCCCCACCAGC
AAATCATCTTCCCGACAACCTCGTAAATCCCGCAGACGTACTGCCCTCAGAGACTTCTTC
CTTTCAAATTTCTTCACCATAGGCCTCTCTTTCTCACTCTTCATCTTCATTCTCATCGTC
TACAGCTATGGAGTCCCTAAACCCCTTCTCTCATCCCATTTCCGAGCTGCCCGAACCCGA
TTCCATCGACTCAGGAAGCCCACTTACCGGAAATCTCCTGGTAGCGACGCTGTGTCAGGT
GCGGTTGTTGATATCACCACAAAGGACTTGTACGATAAGATTCAGTTTCGGGATGAAGAT
GGTGGAGCTTGGAAGCAGGGTTGGAACGTGAACTACAAAGGCAATGAATGGGATTCCGAG
AAGTTGAAAATATTTGTTGTCCCACATTCACATAATGATCCTGGTTGGAAGCTTACGGTT
GAGGAGTATTATGATAGGCAGTCCAAGCACATCCTAGATACCCTTGTTGAAACACTTCCA
AAGGATTCCCGGAGGAAATTTATATGGGAAGAGATGTCCTATCTGGAGAGATGGTGGAGG
GATGCAACCAATGAAAAGAAAGAGACATTTACCAATCTAGTGAGGAATGGGCAGCTAGAA
ATTGTTGGAGGTGGTTGGGTGATGAATGATGAGGCTAATTCACATTACTTTGCAATTATT
GAACAGATTACAGAAGGAAATATGTGGTTGAATGAGACTATAGGTGTAATTCCTAAAAAT
TCTTGGGCCATTGATCCCTTCGGCTATTCACCAACTATGGCATATCTTTTGCGGCGTATG
GGTTTCGAGAACATGCTAATACAGAGAACTCATTATGAGTTGAAGAAGGAACTGGCTTTA
AACCAGAATTTGGAATATGTGTGGCGACAGAGCTGGGATGCCGAAGAAAGAACTGATATT
TTTGTCCATATGATGCCATTTTATTCCTATGATGTTCCACATACTTGTGGACCTGAGCCT
GCAATTTGTTGTCAGTTTGACTTTGCTCGAATGTATGGGTTTCCTTATGAACGATGTCCT
TGGGGAGAGCATCCTGAGGAGACCACCCAGGAGAATGTGAAGGAAAGAGCACTTAAACTT
TTGGATCAGTATAGAAAGAAATCAACACTATATCGAACAAATACACTTCTTGTTCCTCTA
GGTGACGATTTCCGTTATGTCAGTGTTGATGAAGCAGAAGCTCAGTTTCGGAATTACCAA
ATGCTGTTTGATTATATCAATTCCAACCCTGGCTTGAATGCAGAGGCTAATTTTGGTACT
TTAGATGATTATTTCCGAACACTACGTGATGAGGCTGACAGAGTAAACTATTCTCGTCCA
CATGAGATTGGATCTGGTGAGATTGGGGGGTTTCCTTCTCTGTCAGGTGATTTCTTCACT
TACGCTGACAGGCAACAGGATTACTGGAGTGGCTATTATGTCTCCAGGCCTTTCTTCAAG
GCAGTTGATCGTGTTTTGGAGCATAACCTTCGCAGTGCTGAAATGTTGATGGCTTTCCTA
TTAGGTTACTGCCAAAGAATACAGTGTGAAAAATTGCCTACTGGATTTTCCTACAAATTG
ACCGCAGCGAGAAGGAACTTGGCACTTTTTCAGCATCATGATGGGGTCACTGGTACTGCC
AAGGACCATGTGGTGCAGGACTATGGAACACGGATGCACTTGGCTCTGCAAGACCTTCAA
ATTTTTATGTCTAAGGCTATTGAGGTGTTACTAGGGATCCGCCATGAGAAAAATGACCAA
CCTCCTTCTCAGTTTGAACCAGCACAGTCGAGATCTAAATATGATGCCCAACCAGTGGTT
AAAGCCGTCAGCGCTCGTGAAGGAACTGTTCAGACGGTGGTCCTTTTCAATCCATCAGAG
CAGACAAGAAATGAAGTTGTCATGGTCACTGTTGAGAGGCCGGATGTAACAATCTTGGAC
TCAAACTGGACATGTATTAAAAGCCAGATATCTCCAGAGTTGTCACATGATAAGAGAAGT
ACTTTATCTAAAAGACATCGTGTGTACTGGAAAGCTTCAGTACCTGCCATGGGATTGCAA
ACATATTATGTTGCGAATGGATTTGCTGGATGTGAGAAGGCAATACCTGCACAACTTAGA
ATATCAGTGTCTTCTGGAAATATCTCCTGCCCATCACCATACACTTGCTCAAAGTTTGAG
AGCAATGAAGCAGCAATCCAGAATGAACATCTGACACTCACCTTTAGTACCAAGTTTGGT
TTGTTGCAGAAAGTAAGCCATAGTGATGGTAGACAAAATGTTATTGATGAAGAAATTGAT
ATGTACTCTAGCACAGGTGGAGCCTACCTGTTCAAACCGGAGGGTGAGGCTGAGCCAATC
ATACAAGCTGGTGGGATTATGGTTATCTCGGAGGGCCATTTGGTACAGGAGGTCTATTCT
TACCCAATGACAGCATGGGACAAGTCTCCAATTTCCCATAGCACCCGCATATATAACGGT
CACAATACCATACAGGAACACATTATTGAGAAGGAGTATCATGTTGAGCTTCTTGGTCAT
GAACTCAATGACAGGGAATTGATAGTTAGGTACAAGACTGATATTGAAAACAAAAGGATT
TTCTATTCTGATCTAAATGGATTCCAGATGAGCCGTAGAGAATCCTATGATAAGATCCCT
ACACAGGGCAACTATTATCCAATACCTTCCCTTGCATTTATGCAAGGACCACATGGAGAC
CGCTTCTCTGTCCACACTAGGCAGTCTTTGGGTGTTGCAAGTCTCAAGGATGGATGGTTA
GAGATAATGCTTGACAGGAGATTGGTAAGGGATGATGGACGTGGTCTAGGCCAAGGAGTG
ATGGATAACCGTGCAATGAATGTTGTTTTCCATATCCTTGTGGAGTCTAATGTTACAGAA
GCAAACCAAACTACAGGTCCTCATCCTCTAAATCCGTCTCTTCTATCGCATTTGGTTGGT
GCCCACCTAAACTATCCTCTTCATGTATTCATTGCCAAGAAATCTGAGGAAATCTCTGTA
CAGCCACCCCCTAGGTCCTTTTCTCCCCTGGCAGCTTCTTTACCATGTGACTTGCATATT
GTCAACTTCAAGGTTCCTCGTCCTCTCAAGTATACTCAACAACAACTTGAAGAGCCTAGG
TTTGCCCTAGTCTTTCAGAGACGACACTGGGATTCTTCTTTCTGTAGAAAGGCCAGGTCA
GAATGTTCAAGTGTAGCTGATGTGCCCGTTAATCTGTTTTACATGTTCAAGAATCTGGCT
GTGTTGAATGCAAAGGCTACTTCTTTAAATCTTTTGCATGATGACATAGAGATACTTGGC
TATGGCGACCATTTTGGAGATGGAGCTCATGATGGGCATGTCCTCATTTCACCCATGGAG
ATACAGGCTTACAAGTTGGAACTAAGGCCCCACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400002523
PEP Infomation

pacid=37425433 transcript=PGSC0003DMT400003533 locus=PGSC0003DMG400001394 ID=PGSC0003DMT400003533.v4.03 annot-version=v4.03
Sequence

MAFSSRRGGTGWAHSLLPTSKSSSRQPRKSRRRTALRDFFLSNFFTIGLSFSLFIFILIV
YSYGVPKPLLSSHFRAARTRFHRLRKPTYRKSPGSDAVSGAVVDITTKDLYDKIQFRDED
GGAWKQGWNVNYKGNEWDSEKLKIFVVPHSHNDPGWKLTVEEYYDRQSKHILDTLVETLP
KDSRRKFIWEEMSYLERWWRDATNEKKETFTNLVRNGQLEIVGGGWVMNDEANSHYFAII
EQITEGNMWLNETIGVIPKNSWAIDPFGYSPTMAYLLRRMGFENMLIQRTHYELKKELAL
NQNLEYVWRQSWDAEERTDIFVHMMPFYSYDVPHTCGPEPAICCQFDFARMYGFPYERCP
WGEHPEETTQENVKERALKLLDQYRKKSTLYRTNTLLVPLGDDFRYVSVDEAEAQFRNYQ
MLFDYINSNPGLNAEANFGTLDDYFRTLRDEADRVNYSRPHEIGSGEIGGFPSLSGDFFT
YADRQQDYWSGYYVSRPFFKAVDRVLEHNLRSAEMLMAFLLGYCQRIQCEKLPTGFSYKL
TAARRNLALFQHHDGVTGTAKDHVVQDYGTRMHLALQDLQIFMSKAIEVLLGIRHEKNDQ
PPSQFEPAQSRSKYDAQPVVKAVSAREGTVQTVVLFNPSEQTRNEVVMVTVERPDVTILD
SNWTCIKSQISPELSHDKRSTLSKRHRVYWKASVPAMGLQTYYVANGFAGCEKAIPAQLR
ISVSSGNISCPSPYTCSKFESNEAAIQNEHLTLTFSTKFGLLQKVSHSDGRQNVIDEEID
MYSSTGGAYLFKPEGEAEPIIQAGGIMVISEGHLVQEVYSYPMTAWDKSPISHSTRIYNG
HNTIQEHIIEKEYHVELLGHELNDRELIVRYKTDIENKRIFYSDLNGFQMSRRESYDKIP
TQGNYYPIPSLAFMQGPHGDRFSVHTRQSLGVASLKDGWLEIMLDRRLVRDDGRGLGQGV
MDNRAMNVVFHILVESNVTEANQTTGPHPLNPSLLSHLVGAHLNYPLHVFIAKKSEEISV
QPPPRSFSPLAASLPCDLHIVNFKVPRPLKYTQQQLEEPRFALVFQRRHWDSSFCRKARS
ECSSVADVPVNLFYMFKNLAVLNAKATSLNLLHDDIEILGYGDHFGDGAHDGHVLISPME
IQAYKLELRPH*

Transcript Sequence

Transcript ID

PGSC0003DMT400003533
Transcript Infomation

pacid=37425433 locus=PGSC0003DMG400001394 ID=PGSC0003DMT400003533.v4.03 annot-version=v4.03
Sequence

ATGGCCTTTTCCTCCCGCCGCGGCGGAACTGGGTGGGCCCATTCACTCCTCCCCACCAGC
AAATCATCTTCCCGACAACCTCGTAAATCCCGCAGACGTACTGCCCTCAGAGACTTCTTC
CTTTCAAATTTCTTCACCATAGGCCTCTCTTTCTCACTCTTCATCTTCATTCTCATCGTC
TACAGCTATGGAGTCCCTAAACCCCTTCTCTCATCCCATTTCCGAGCTGCCCGAACCCGA
TTCCATCGACTCAGGAAGCCCACTTACCGGAAATCTCCTGGTAGCGACGCTGTGTCAGGT
GCGGTTGTTGATATCACCACAAAGGACTTGTACGATAAGATTCAGTTTCGGGATGAAGAT
GGTGGAGCTTGGAAGCAGGGTTGGAACGTGAACTACAAAGGCAATGAATGGGATTCCGAG
AAGTTGAAAATATTTGTTGTCCCACATTCACATAATGATCCTGGTTGGAAGCTTACGGTT
GAGGAGTATTATGATAGGCAGTCCAAGCACATCCTAGATACCCTTGTTGAAACACTTCCA
AAGGATTCCCGGAGGAAATTTATATGGGAAGAGATGTCCTATCTGGAGAGATGGTGGAGG
GATGCAACCAATGAAAAGAAAGAGACATTTACCAATCTAGTGAGGAATGGGCAGCTAGAA
ATTGTTGGAGGTGGTTGGGTGATGAATGATGAGGCTAATTCACATTACTTTGCAATTATT
GAACAGATTACAGAAGGAAATATGTGGTTGAATGAGACTATAGGTGTAATTCCTAAAAAT
TCTTGGGCCATTGATCCCTTCGGCTATTCACCAACTATGGCATATCTTTTGCGGCGTATG
GGTTTCGAGAACATGCTAATACAGAGAACTCATTATGAGTTGAAGAAGGAACTGGCTTTA
AACCAGAATTTGGAATATGTGTGGCGACAGAGCTGGGATGCCGAAGAAAGAACTGATATT
TTTGTCCATATGATGCCATTTTATTCCTATGATGTTCCACATACTTGTGGACCTGAGCCT
GCAATTTGTTGTCAGTTTGACTTTGCTCGAATGTATGGGTTTCCTTATGAACGATGTCCT
TGGGGAGAGCATCCTGAGGAGACCACCCAGGAGAATGTGAAGGAAAGAGCACTTAAACTT
TTGGATCAGTATAGAAAGAAATCAACACTATATCGAACAAATACACTTCTTGTTCCTCTA
GGTGACGATTTCCGTTATGTCAGTGTTGATGAAGCAGAAGCTCAGTTTCGGAATTACCAA
ATGCTGTTTGATTATATCAATTCCAACCCTGGCTTGAATGCAGAGGCTAATTTTGGTACT
TTAGATGATTATTTCCGAACACTACGTGATGAGGCTGACAGAGTAAACTATTCTCGTCCA
CATGAGATTGGATCTGGTGAGATTGGGGGGTTTCCTTCTCTGTCAGGTGATTTCTTCACT
TACGCTGACAGGCAACAGGATTACTGGAGTGGCTATTATGTCTCCAGGCCTTTCTTCAAG
GCAGTTGATCGTGTTTTGGAGCATAACCTTCGCAGTGCTGAAATGTTGATGGCTTTCCTA
TTAGGTTACTGCCAAAGAATACAGTGTGAAAAATTGCCTACTGGATTTTCCTACAAATTG
ACCGCAGCGAGAAGGAACTTGGCACTTTTTCAGCATCATGATGGGGTCACTGGTACTGCC
AAGGACCATGTGGTGCAGGACTATGGAACACGGATGCACTTGGCTCTGCAAGACCTTCAA
ATTTTTATGTCTAAGGCTATTGAGGTGTTACTAGGGATCCGCCATGAGAAAAATGACCAA
CCTCCTTCTCAGTTTGAACCAGCACAGTCGAGATCTAAATATGATGCCCAACCAGTGGTT
AAAGCCGTCAGCGCTCGTGAAGGAACTGTTCAGACGGTGGTCCTTTTCAATCCATCAGAG
CAGACAAGAAATGAAGTTGTCATGGTCACTGTTGAGAGGCCGGATGTAACAATCTTGGAC
TCAAACTGGACATGTATTAAAAGCCAGATATCTCCAGAGTTGTCACATGATAAGAGAAGT
ACTTTATCTAAAAGACATCGTGTGTACTGGAAAGCTTCAGTACCTGCCATGGGATTGCAA
ACATATTATGTTGCGAATGGATTTGCTGGATGTGAGAAGGCAATACCTGCACAACTTAGA
ATATCAGTGTCTTCTGGAAATATCTCCTGCCCATCACCATACACTTGCTCAAAGTTTGAG
AGCAATGAAGCAGCAATCCAGAATGAACATCTGACACTCACCTTTAGTACCAAGTTTGGT
TTGTTGCAGAAAGTAAGCCATAGTGATGGTAGACAAAATGTTATTGATGAAGAAATTGAT
ATGTACTCTAGCACAGGTGGAGCCTACCTGTTCAAACCGGAGGGTGAGGCTGAGCCAATC
ATACAAGCTGGTGGGATTATGGTTATCTCGGAGGGCCATTTGGTACAGGAGGTCTATTCT
TACCCAATGACAGCATGGGACAAGTCTCCAATTTCCCATAGCACCCGCATATATAACGGT
CACAATACCATACAGGAACACATTATTGAGAAGGAGTATCATGTTGAGCTTCTTGGTCAT
GAACTCAATGACAGGGAATTGATAGTTAGGTACAAGACTGATATTGAAAACAAAAGGATT
TTCTATTCTGATCTAAATGGATTCCAGATGAGCCGTAGAGAATCCTATGATAAGATCCCT
ACACAGGGCAACTATTATCCAATACCTTCCCTTGCATTTATGCAAGGACCACATGGAGAC
CGCTTCTCTGTCCACACTAGGCAGTCTTTGGGTGTTGCAAGTCTCAAGGATGGATGGTTA
GAGATAATGCTTGACAGGAGATTGGTAAGGGATGATGGACGTGGTCTAGGCCAAGGAGTG
ATGGATAACCGTGCAATGAATGTTGTTTTCCATATCCTTGTGGAGTCTAATGTTACAGAA
GCAAACCAAACTACAGGTCCTCATCCTCTAAATCCGTCTCTTCTATCGCATTTGGTTGGT
GCCCACCTAAACTATCCTCTTCATGTATTCATTGCCAAGAAATCTGAGGAAATCTCTGTA
CAGCCACCCCCTAGGTCCTTTTCTCCCCTGGCAGCTTCTTTACCATGTGACTTGCATATT
GTCAACTTCAAGGTTCCTCGTCCTCTCAAGTATACTCAACAACAACTTGAAGAGCCTAGG
TTTGCCCTAGTCTTTCAGAGACGACACTGGGATTCTTCTTTCTGTAGAAAGGCCAGGTCA
GAATGTTCAAGTGTAGCTGATGTGCCCGTTAATCTGTTTTACATGTTCAAGAATCTGGCT
GTGTTGAATGCAAAGGCTACTTCTTTAAATCTTTTGCATGATGACATAGAGATACTTGGC
TATGGCGACCATTTTGGAGATGGAGCTCATGATGGGCATGTCCTCATTTCACCCATGGAG
ATACAGGCTTACAAGTTGGAACTAAGGCCCCACTAG