Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003464
CDS Infomation

pacid=37425711 polypeptide=PGSC0003DMP400002467 locus=PGSC0003DMG400001369 ID=PGSC0003DMT400003464.v4.03 annot-version=v4.03
Sequence

ATGGCAACCATTACTTTACTTTTCTTTCTCTTCTTACAACTCATAACGGCCACTATTTCT
ACCACGCCGCTACCGTATAACGCCACTGTTTATGTCTTGCTTAACTGTGGCGCACAATCA
GCCACCACCGATGAAACTGACCGTCGATGGGATACTGATACTCACTTCCCAAATTTCTTA
CCTTCCGACTTTTCAAACATATCCACAACTGCCACAGCTTCTGAACAAGATCCTTCGGTC
AATAGAGTTCCTTATACGACTGGTGCTCGTATCATGAAATCTCGATTCACTTACACTTTC
CGTGTTTCCCCTGGCGCCAAATTCCTCCGTCTCTATTTTTACCCCGCCAATTACTCTGGC
TTCAACAAAGCTGAATCTTTTTTCTCCGTCACAGCTAATCATTTAACCCTCTTGAGAAAC
TTCAGCGCTCTCGCTGCAGTTACCGATTCTAGTAAAGCTCTTCGAAAAGAATTTGTCATT
AATGTTGATGAAACTCAGATTCTTGATGTGACCTTTTCTCCCTCGCCAAACTCTTATGCT
TTTGTTAATGGGATTGAGATACTTTCCATGCCTACCAATCTCTACATCCATGGAAACCAT
CGCATTAAATTGGTGGGCCAGAATGATTTTTTTTACATCAATAACAGCACTGCTCTTGAA
ACTTTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGGTAGCACAGAGGATACAGGGATG
TATCGTGTATGGGATTCAGATGATGCATTTGTTGTTGGATATGGCTATCAAACTCCTCAT
TTTGATGTCAACATCACTTACACTTCTGAAACCCCGCCTTATTCTGCGCCGAGGATAGTT
TACACAACCTCTAGGACTATGTCCAATCACAGCCAGAGCCTGGATTGGGAATTCCCTCTA
AACTCTGGTTTCTATTATCTTTTCAGGCTCCATTTTTGTGAGATTCAGCCGGAAGTTCTG
GAAGTGAACGACAGGGTTTTTGACATATACATTGGAAACCAAATGGCAGAGCGAGCAGCG
GATGTAGTTGAATGGAGTGGCGGCTGGAGATTCCCGGTTTACAGAGACTACGTGGTGAAT
GTGACTAACCCAGACGACCGACGAAACAAACAAAGTATTACGCTTCAATTGAGTCCTAAC
ATGGAAACAAAAGCTGTGTATGCTGATGCTACCTTAGGATCAGCATATTCAAATGCTATC
TTAAATGGCTTAGAAATTTTCAAATTGGGTGATGCAATTGGGAGTCTGGCCGCGTCAAAT
CATGAATTGCCGTCAGAAGCTCCGATCGCTTCATTAGCTTTTCCTAACAACAAGAAGAAA
AGAATATCATGGCATATCATTGTTGCTATCATCACAGGTGTGACTAGCGGTATTGCTTTT
TTCTCGATTCTGGGTTTCTTAATTTCCCGACGACGAAATGGGGGAAAAGATTCTGGTACA
AGTGTTACCAAGTCATCATCACCACCATCCGATCTGTGCCGACACTTTTTAATAGCAGAG
ATAAAAAACGCTACCGACAATTTTGATGAAAAATTTGTGATTGGATATGGAGGCTTTGGT
AATGTTTATAAAGGGTACCTTGACAATGGTACAACCACAGTTGCAGTCAAGAGATCGAAT
CCTTCATCAAAGCAAGGGATTCGCGAGTTCCAAACAGAGATTGAGATGTTATCATCAAAG
CTAAGGCATCGACATCTAGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATC
TTGGTTTATGATTACATGGCTAATGGTACCCTCCGTGATCACTTGTACAATACTGACAAT
GCTCCTCTTCCATGGAAGAAACGCCTTGACATTTGCATTGGTGCAGCTAAAGGATTATGT
TACCTTCATTCAGGTACCAAACATATGATCATTCATCGAGATGTCAAGTCAACTAACATC
CTATTGGACGATAAATGGGTCGCCAAGGTGTCCGATTTTGGATTGTCCAAAGTAGGTTCA
GTAGGTGGGACAGATATTACCCATGTTAGCACTGCAGTGAAAGGAAGTTTTGGGTATGTA
GATCCTGAATACTACAAGCGCCAACGATTGACAGTAAAATCAGATGTTTATTCTTTTGGG
GTGGTTCTATTTGAAGTGTTATGCGCTAGACCGGCAATAAATCCAAACTTGCCAAGTGGG
CAAGTGAATTTGGCTGAGTGGGCTAGTAGGAGTTGTAAAAAGAGAGAACTTGAAGAAATT
ATTGATCCTAACTTGAAAGGACAAATAGCCCCAGAATGCTTAAGCAAGTTTGCAGAATTG
GCATATCATTGTTTGAGAAAAGAAGGGGTTCAAAGGCCATCAATGGGTGATGTTGTAAAA
ACTTTAGAATCTGCATTACAGGTTCAAGAGGGTGAAGATCATGAGGTGGAAGGATCCTCT
TTTCCGTTGATTATTAATGGTGATGCTATGAATGAAGATGAGATATTCTCAGATTTAAGT
GAAGTTGAAAGAAAATTGACAAGCAATGGTATATCCATGTCGGTCAGTAGGAGTGCCAAA
GTGAACAATGTTGCCCTTTTCTCTGAGATTATCACTCCATTGGGTCGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002467
PEP Infomation

pacid=37425711 transcript=PGSC0003DMT400003464 locus=PGSC0003DMG400001369 ID=PGSC0003DMT400003464.v4.03 annot-version=v4.03
Sequence

MATITLLFFLFLQLITATISTTPLPYNATVYVLLNCGAQSATTDETDRRWDTDTHFPNFL
PSDFSNISTTATASEQDPSVNRVPYTTGARIMKSRFTYTFRVSPGAKFLRLYFYPANYSG
FNKAESFFSVTANHLTLLRNFSALAAVTDSSKALRKEFVINVDETQILDVTFSPSPNSYA
FVNGIEILSMPTNLYIHGNHRIKLVGQNDFFYINNSTALETLYRLNVGGNLVGSTEDTGM
YRVWDSDDAFVVGYGYQTPHFDVNITYTSETPPYSAPRIVYTTSRTMSNHSQSLDWEFPL
NSGFYYLFRLHFCEIQPEVLEVNDRVFDIYIGNQMAERAADVVEWSGGWRFPVYRDYVVN
VTNPDDRRNKQSITLQLSPNMETKAVYADATLGSAYSNAILNGLEIFKLGDAIGSLAASN
HELPSEAPIASLAFPNNKKKRISWHIIVAIITGVTSGIAFFSILGFLISRRRNGGKDSGT
SVTKSSSPPSDLCRHFLIAEIKNATDNFDEKFVIGYGGFGNVYKGYLDNGTTTVAVKRSN
PSSKQGIREFQTEIEMLSSKLRHRHLVSLIGYCDDKNEMILVYDYMANGTLRDHLYNTDN
APLPWKKRLDICIGAAKGLCYLHSGTKHMIIHRDVKSTNILLDDKWVAKVSDFGLSKVGS
VGGTDITHVSTAVKGSFGYVDPEYYKRQRLTVKSDVYSFGVVLFEVLCARPAINPNLPSG
QVNLAEWASRSCKKRELEEIIDPNLKGQIAPECLSKFAELAYHCLRKEGVQRPSMGDVVK
TLESALQVQEGEDHEVEGSSFPLIINGDAMNEDEIFSDLSEVERKLTSNGISMSVSRSAK
VNNVALFSEIITPLGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400003464
Transcript Infomation

pacid=37425711 locus=PGSC0003DMG400001369 ID=PGSC0003DMT400003464.v4.03 annot-version=v4.03
Sequence

ATGGCAACCATTACTTTACTTTTCTTTCTCTTCTTACAACTCATAACGGCCACTATTTCT
ACCACGCCGCTACCGTATAACGCCACTGTTTATGTCTTGCTTAACTGTGGCGCACAATCA
GCCACCACCGATGAAACTGACCGTCGATGGGATACTGATACTCACTTCCCAAATTTCTTA
CCTTCCGACTTTTCAAACATATCCACAACTGCCACAGCTTCTGAACAAGATCCTTCGGTC
AATAGAGTTCCTTATACGACTGGTGCTCGTATCATGAAATCTCGATTCACTTACACTTTC
CGTGTTTCCCCTGGCGCCAAATTCCTCCGTCTCTATTTTTACCCCGCCAATTACTCTGGC
TTCAACAAAGCTGAATCTTTTTTCTCCGTCACAGCTAATCATTTAACCCTCTTGAGAAAC
TTCAGCGCTCTCGCTGCAGTTACCGATTCTAGTAAAGCTCTTCGAAAAGAATTTGTCATT
AATGTTGATGAAACTCAGATTCTTGATGTGACCTTTTCTCCCTCGCCAAACTCTTATGCT
TTTGTTAATGGGATTGAGATACTTTCCATGCCTACCAATCTCTACATCCATGGAAACCAT
CGCATTAAATTGGTGGGCCAGAATGATTTTTTTTACATCAATAACAGCACTGCTCTTGAA
ACTTTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGGTAGCACAGAGGATACAGGGATG
TATCGTGTATGGGATTCAGATGATGCATTTGTTGTTGGATATGGCTATCAAACTCCTCAT
TTTGATGTCAACATCACTTACACTTCTGAAACCCCGCCTTATTCTGCGCCGAGGATAGTT
TACACAACCTCTAGGACTATGTCCAATCACAGCCAGAGCCTGGATTGGGAATTCCCTCTA
AACTCTGGTTTCTATTATCTTTTCAGGCTCCATTTTTGTGAGATTCAGCCGGAAGTTCTG
GAAGTGAACGACAGGGTTTTTGACATATACATTGGAAACCAAATGGCAGAGCGAGCAGCG
GATGTAGTTGAATGGAGTGGCGGCTGGAGATTCCCGGTTTACAGAGACTACGTGGTGAAT
GTGACTAACCCAGACGACCGACGAAACAAACAAAGTATTACGCTTCAATTGAGTCCTAAC
ATGGAAACAAAAGCTGTGTATGCTGATGCTACCTTAGGATCAGCATATTCAAATGCTATC
TTAAATGGCTTAGAAATTTTCAAATTGGGTGATGCAATTGGGAGTCTGGCCGCGTCAAAT
CATGAATTGCCGTCAGAAGCTCCGATCGCTTCATTAGCTTTTCCTAACAACAAGAAGAAA
AGAATATCATGGCATATCATTGTTGCTATCATCACAGGTGTGACTAGCGGTATTGCTTTT
TTCTCGATTCTGGGTTTCTTAATTTCCCGACGACGAAATGGGGGAAAAGATTCTGGTACA
AGTGTTACCAAGTCATCATCACCACCATCCGATCTGTGCCGACACTTTTTAATAGCAGAG
ATAAAAAACGCTACCGACAATTTTGATGAAAAATTTGTGATTGGATATGGAGGCTTTGGT
AATGTTTATAAAGGGTACCTTGACAATGGTACAACCACAGTTGCAGTCAAGAGATCGAAT
CCTTCATCAAAGCAAGGGATTCGCGAGTTCCAAACAGAGATTGAGATGTTATCATCAAAG
CTAAGGCATCGACATCTAGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATC
TTGGTTTATGATTACATGGCTAATGGTACCCTCCGTGATCACTTGTACAATACTGACAAT
GCTCCTCTTCCATGGAAGAAACGCCTTGACATTTGCATTGGTGCAGCTAAAGGATTATGT
TACCTTCATTCAGGTACCAAACATATGATCATTCATCGAGATGTCAAGTCAACTAACATC
CTATTGGACGATAAATGGGTCGCCAAGGTGTCCGATTTTGGATTGTCCAAAGTAGGTTCA
GTAGGTGGGACAGATATTACCCATGTTAGCACTGCAGTGAAAGGAAGTTTTGGGTATGTA
GATCCTGAATACTACAAGCGCCAACGATTGACAGTAAAATCAGATGTTTATTCTTTTGGG
GTGGTTCTATTTGAAGTGTTATGCGCTAGACCGGCAATAAATCCAAACTTGCCAAGTGGG
CAAGTGAATTTGGCTGAGTGGGCTAGTAGGAGTTGTAAAAAGAGAGAACTTGAAGAAATT
ATTGATCCTAACTTGAAAGGACAAATAGCCCCAGAATGCTTAAGCAAGTTTGCAGAATTG
GCATATCATTGTTTGAGAAAAGAAGGGGTTCAAAGGCCATCAATGGGTGATGTTGTAAAA
ACTTTAGAATCTGCATTACAGGTTCAAGAGGGTGAAGATCATGAGGTGGAAGGATCCTCT
TTTCCGTTGATTATTAATGGTGATGCTATGAATGAAGATGAGATATTCTCAGATTTAAGT
GAAGTTGAAAGAAAATTGACAAGCAATGGTATATCCATGTCGGTCAGTAGGAGTGCCAAA
GTGAACAATGTTGCCCTTTTCTCTGAGATTATCACTCCATTGGGTCGATGA