Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003454
CDS Infomation

pacid=37427472 polypeptide=PGSC0003DMP400002458 locus=PGSC0003DMG400001362 ID=PGSC0003DMT400003454.v4.03 annot-version=v4.03
Sequence

ATGATTACAAGAGAAGAGAAGGCAAATGAGAGCAAGGCATCTTCGTCTACAACATCATGG
ACAAGGTTAAAGGATCCAAGAATTGTTCGTGTTTCGCGAGCATTTGGAGGAAAAGACAGG
CACAGCAAAGTTTGTACTGTAAGAGGGCTAAGAGATCGTCGTGTAAGGCTTTCAGTTCCT
ACTGCTATTCAATTATATGATCTTCAAGACAGATTAGGGCTTAATCAACCAAGTAAAGTT
GTTGATTGGTTGCTTGATGCAGCTAAACATGAAATCGACGAATTGCCTCCCTTGCAAATT
CCTCCTGGAAGTTTGAACCCTAATCTTTATCCTATGTTAGGAATTGGAGGTAATTCTCAT
CAAATTACTAGTAATAAAGAGGGTCTTAATAATAAGAGCATCAATTGGGATGATAATGTC
GTTCCATTGGAACCACCTAATAATAATAATAATAATGCTTTGGGCTACAATTCCAATTTT
TTGAAATGGGATCCTTCAAATTTATCCTTAGCTCATTCAGAAAATTCATTATCTCATCAA
CATCAAGATATTCATCACAACTTCAATTTAATGTCTAGTATGCCATTAGGTTCACATCAT
CAAGTTGTTGTTTATCCACCAGGATTGCCTCAATTTTTCCATCAACATAATATTGTTGGA
CCATCGTCATCATCAGAGTTTGATCCCAAGGAAATAAACTTCCAAATGTTGAGTAATAAT
TCCGGTTCAGAAAATCCCATGTCAAGTAGTACTAATTCCTTTAGACATTCTATTGACTCC
ACAAGTCAATCTATAAGACCTTTCCATTTTCTACCTTCTCAAAATTGTGACGAGACGGAG
CCCTCCAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002458
PEP Infomation

pacid=37427472 transcript=PGSC0003DMT400003454 locus=PGSC0003DMG400001362 ID=PGSC0003DMT400003454.v4.03 annot-version=v4.03
Sequence

MITREEKANESKASSSTTSWTRLKDPRIVRVSRAFGGKDRHSKVCTVRGLRDRRVRLSVP
TAIQLYDLQDRLGLNQPSKVVDWLLDAAKHEIDELPPLQIPPGSLNPNLYPMLGIGGNSH
QITSNKEGLNNKSINWDDNVVPLEPPNNNNNNALGYNSNFLKWDPSNLSLAHSENSLSHQ
HQDIHHNFNLMSSMPLGSHHQVVVYPPGLPQFFHQHNIVGPSSSSEFDPKEINFQMLSNN
SGSENPMSSSTNSFRHSIDSTSQSIRPFHFLPSQNCDETEPSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400003454
Transcript Infomation

pacid=37427472 locus=PGSC0003DMG400001362 ID=PGSC0003DMT400003454.v4.03 annot-version=v4.03
Sequence

ATGATTACAAGAGAAGAGAAGGCAAATGAGAGCAAGGCATCTTCGTCTACAACATCATGG
ACAAGGTTAAAGGATCCAAGAATTGTTCGTGTTTCGCGAGCATTTGGAGGAAAAGACAGG
CACAGCAAAGTTTGTACTGTAAGAGGGCTAAGAGATCGTCGTGTAAGGCTTTCAGTTCCT
ACTGCTATTCAATTATATGATCTTCAAGACAGATTAGGGCTTAATCAACCAAGTAAAGTT
GTTGATTGGTTGCTTGATGCAGCTAAACATGAAATCGACGAATTGCCTCCCTTGCAAATT
CCTCCTGGAAGTTTGAACCCTAATCTTTATCCTATGTTAGGAATTGGAGGTAATTCTCAT
CAAATTACTAGTAATAAAGAGGGTCTTAATAATAAGAGCATCAATTGGGATGATAATGTC
GTTCCATTGGAACCACCTAATAATAATAATAATAATGCTTTGGGCTACAATTCCAATTTT
TTGAAATGGGATCCTTCAAATTTATCCTTAGCTCATTCAGAAAATTCATTATCTCATCAA
CATCAAGATATTCATCACAACTTCAATTTAATGTCTAGTATGCCATTAGGTTCACATCAT
CAAGTTGTTGTTTATCCACCAGGATTGCCTCAATTTTTCCATCAACATAATATTGTTGGA
CCATCGTCATCATCAGAGTTTGATCCCAAGGAAATAAACTTCCAAATGTTGAGTAATAAT
TCCGGTTCAGAAAATCCCATGTCAAGTAGTACTAATTCCTTTAGACATTCTATTGACTCC
ACAAGTCAATCTATAAGACCTTTCCATTTTCTACCTTCTCAAAATTGTGACGAGACGGAG
CCCTCCAATTAA