Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003437
CDS Infomation

pacid=37425162 polypeptide=PGSC0003DMP400002445 locus=PGSC0003DMG400001355 ID=PGSC0003DMT400003437.v4.03 annot-version=v4.03
Sequence

ATGACGATCCGGCAGCTCTTAACCCTAGCCCGCCGGTCCCGAAACCTCACCACATCCCAT
TCACTCCGACGTCTTTATTCGGCGTCTGCCGCCGTCGCCGCCACATCCTCCTCCACCCCG
GCCATCGGTCCGCCACCACCAGATGCAATGATCTACGATCGATTGGCTGAAGACGTTAAA
CAAAAGATCAAAAGACTCGAGAATCCTGATTCCCGATTCCTTCAGTACAACTCACCACAC
CCAACTTTAGCCGACCACACATCAATCCTCAGCTTCCCTTCTACGCGCGTGACCACACTA
CCATCAGGCCTGCGCGTGGCCACGGAGACTAATCTCGCTGTCAAGACTGCCACCGTTGGG
GTATTCATTGATGCAGGGTCAAGGTTTGAGACCGATGAGACTAATGGAACAGCTCATTTT
CTTGAGCATATGATCTTTAAGGGTACCGAAAAGAGGACTTCTTGGGAAATGGAGGAGGAG
ATTGAGAATATGGGTGGACATTTGAATGCCTATACTTCCAGGGAGCAAACAGCATACTAT
GCTAAAGTTTTGGATAATGATGTCCCTGTAGCTTTGGATATTTTGGCTGATATACTTCAG
AATTCTAAGTTTGAAGAGAGAAAGATTGAACGTGAACGTGATGTCATCCTTAGGGAGATG
GAGGAGGTTGAAGGTCAAACAGAGGAAGTCATCTTTGACCACTTGCATTCAACTGCATTC
CAGTACTCACCTTTGGGTAGGACTATTCTTGGACCTGCCCAGAATATAAAGACAATCACC
AGAAGTCACCTGAAGGACTACATATCAACACATTATACCGCTCCCAGAATGGTAATTGTT
GCTTCTGGGCCTGTTAAACATGAAGAATTTGTTGAGCAAGTGAAGAAACAATTTACTAAA
CTTTCAACCAATCCGACTACGGCCTCAGAATTGGTTGCCAGAGAACCAGCAATTTTTACA
GGTTCAGAGGTTAGGGTAATTGATGATGACATTCCGTTGGCACAATTTGCTGTTGCTTTT
CAAGGGGCACCATGGACTGATCCAGATGCCATTCCGCTGATGGTAATGCAATCCATGCTG
GGAACTTGGAATAAAAATGCCGGAGGAGGGAAACACATGGGCTCCGATCTGGCACAAAGT
GTTGCCATTAATGAACTAGCTGAGAGCATGATGTCTTTTAACACCAATTATAAGGATACT
GGTCTGTTCGGCGTGTATGCTGTTGCAAAGCCTGATTGTTTGAGTGATTTGTCCTACTGC
ATTATGCGTGAGATAAGCAAATTGTGCTACCGGGTTTCGGATGCTGATGTGACTCGTGCT
TGCAACCAGTTGAAGTCTTCTCTCATGCTTCACATTGATGGAACTAGTCCTGTTGCTGAA
GACATTGGGCGTCAGCTACTCACATATGGCAGAAGGATTCCAGTCACAGAGCTGTTTGCA
AGGGTTGATGCCGTGGATGCTAGCACCATCAAACGAGTTGCAAACAGATTTATCTTTGAC
CAGGATGTTGCTATATCCGCGTTGGGGCCTATCCAGACTCTACCTGATTATAATTGGTTC
AGGCGTAGAACCTTCATGCTCCGTTATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400002445
PEP Infomation

pacid=37425162 transcript=PGSC0003DMT400003437 locus=PGSC0003DMG400001355 ID=PGSC0003DMT400003437.v4.03 annot-version=v4.03
Sequence

MTIRQLLTLARRSRNLTTSHSLRRLYSASAAVAATSSSTPAIGPPPPDAMIYDRLAEDVK
QKIKRLENPDSRFLQYNSPHPTLADHTSILSFPSTRVTTLPSGLRVATETNLAVKTATVG
VFIDAGSRFETDETNGTAHFLEHMIFKGTEKRTSWEMEEEIENMGGHLNAYTSREQTAYY
AKVLDNDVPVALDILADILQNSKFEERKIERERDVILREMEEVEGQTEEVIFDHLHSTAF
QYSPLGRTILGPAQNIKTITRSHLKDYISTHYTAPRMVIVASGPVKHEEFVEQVKKQFTK
LSTNPTTASELVAREPAIFTGSEVRVIDDDIPLAQFAVAFQGAPWTDPDAIPLMVMQSML
GTWNKNAGGGKHMGSDLAQSVAINELAESMMSFNTNYKDTGLFGVYAVAKPDCLSDLSYC
IMREISKLCYRVSDADVTRACNQLKSSLMLHIDGTSPVAEDIGRQLLTYGRRIPVTELFA
RVDAVDASTIKRVANRFIFDQDVAISALGPIQTLPDYNWFRRRTFMLRY*

Transcript Sequence

Transcript ID

PGSC0003DMT400003437
Transcript Infomation

pacid=37425162 locus=PGSC0003DMG400001355 ID=PGSC0003DMT400003437.v4.03 annot-version=v4.03
Sequence

ATGACGATCCGGCAGCTCTTAACCCTAGCCCGCCGGTCCCGAAACCTCACCACATCCCAT
TCACTCCGACGTCTTTATTCGGCGTCTGCCGCCGTCGCCGCCACATCCTCCTCCACCCCG
GCCATCGGTCCGCCACCACCAGATGCAATGATCTACGATCGATTGGCTGAAGACGTTAAA
CAAAAGATCAAAAGACTCGAGAATCCTGATTCCCGATTCCTTCAGTACAACTCACCACAC
CCAACTTTAGCCGACCACACATCAATCCTCAGCTTCCCTTCTACGCGCGTGACCACACTA
CCATCAGGCCTGCGCGTGGCCACGGAGACTAATCTCGCTGTCAAGACTGCCACCGTTGGG
GTATTCATTGATGCAGGGTCAAGGTTTGAGACCGATGAGACTAATGGAACAGCTCATTTT
CTTGAGCATATGATCTTTAAGGGTACCGAAAAGAGGACTTCTTGGGAAATGGAGGAGGAG
ATTGAGAATATGGGTGGACATTTGAATGCCTATACTTCCAGGGAGCAAACAGCATACTAT
GCTAAAGTTTTGGATAATGATGTCCCTGTAGCTTTGGATATTTTGGCTGATATACTTCAG
AATTCTAAGTTTGAAGAGAGAAAGATTGAACGTGAACGTGATGTCATCCTTAGGGAGATG
GAGGAGGTTGAAGGTCAAACAGAGGAAGTCATCTTTGACCACTTGCATTCAACTGCATTC
CAGTACTCACCTTTGGGTAGGACTATTCTTGGACCTGCCCAGAATATAAAGACAATCACC
AGAAGTCACCTGAAGGACTACATATCAACACATTATACCGCTCCCAGAATGGTAATTGTT
GCTTCTGGGCCTGTTAAACATGAAGAATTTGTTGAGCAAGTGAAGAAACAATTTACTAAA
CTTTCAACCAATCCGACTACGGCCTCAGAATTGGTTGCCAGAGAACCAGCAATTTTTACA
GGTTCAGAGGTTAGGGTAATTGATGATGACATTCCGTTGGCACAATTTGCTGTTGCTTTT
CAAGGGGCACCATGGACTGATCCAGATGCCATTCCGCTGATGGTAATGCAATCCATGCTG
GGAACTTGGAATAAAAATGCCGGAGGAGGGAAACACATGGGCTCCGATCTGGCACAAAGT
GTTGCCATTAATGAACTAGCTGAGAGCATGATGTCTTTTAACACCAATTATAAGGATACT
GGTCTGTTCGGCGTGTATGCTGTTGCAAAGCCTGATTGTTTGAGTGATTTGTCCTACTGC
ATTATGCGTGAGATAAGCAAATTGTGCTACCGGGTTTCGGATGCTGATGTGACTCGTGCT
TGCAACCAGTTGAAGTCTTCTCTCATGCTTCACATTGATGGAACTAGTCCTGTTGCTGAA
GACATTGGGCGTCAGCTACTCACATATGGCAGAAGGATTCCAGTCACAGAGCTGTTTGCA
AGGGTTGATGCCGTGGATGCTAGCACCATCAAACGAGTTGCAAACAGATTTATCTTTGAC
CAGGATGTTGCTATATCCGCGTTGGGGCCTATCCAGACTCTACCTGATTATAATTGGTTC
AGGCGTAGAACCTTCATGCTCCGTTATTAG