Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003414
CDS Infomation

pacid=37425494 polypeptide=PGSC0003DMP400002429 locus=PGSC0003DMG402001347 ID=PGSC0003DMT400003414.v4.03 annot-version=v4.03
Sequence

ATGTCTCAGATCCTTAATCCGAATCCAACTTACGACGTGATAATCTTAGGTGCTTCAGGT
TTTACTGGGAAGTACGTCATTAGAGAAGCTCTCAAATTCCTGGACGTTCCCTCTTCCCCC
TTGAAGAATTTAGCCATTGCTGGCCGTAACACTTCAAAGCTTTCCCAGGCTCTTCAATGG
GCTTCCCGTCCAAACCCACCACCCGAAATCCCCATTCTTACTGCCGATACCACTGACCCA
TCTTCTCTCCGTGACCTTGCTTCACAGACTAAGATCATTCTTAACTGTGTCGGACCGTTT
TATCTTTACGGTGAGCCTGTTGTTGAGGCCTGTGCTGATTCTGGATGCGATTACTTGGAT
ATTTCTGGGGAGCCTGAGTTTATGGAGAGGATAGAGATGAAGTACCATGATAAGGCTGTG
GAAAATGGATCCTTAGTTGTTTCGGCATGTGGGTTTGACTCTATTCCTGCTGAATTGGGA
TTGATGTTCAATTCGAGACAGTGGCTGCCGCCGGCTGTTCCTAACAGTGTTGAGGCCTAC
CTTAGTCTAGAATCGGACAAGAGAATTGTTAAAAATTTGGGGACGTATGAGTCAGCGGTG
CTTGGTGCGGCTAATATGGACAAATTACAGGAGCTGCAGCGGAGCAGACCAAAGAGGCCT
CGTCCTGTGATTCCTGGTCCTCCTCCTAAGGGTCCATTGATGAACCATCTAAAGGAAGTT
GGTGTTTGGGCTGTAAAGTTACCATCAGCAGATGCAATTGTAGTCCGAAGAACACTTTCA
TGTTTCGCTGAAAATCCTCATGGTTTACCTGGTGTTAATGAAAGCGCTGAACAAGTTGAG
AGGAGGGAGGCATTTTGGTCAAGCATAAAGCCAGCTCACTTTGGTGTGAAGATAGCTTCA
AAATCTCTGTTAGGAGTTGTTCGTTTCATTATAGTCGGGCTGTTCATTGGTCTCTTTGGT
AAAACTAGTTTAGGGAGGTGGCTGCTATTGAAATTCCCTTCATTGTTCAGTCTTGGATGG
TTCAGGAAAAAAGGTCCAACTGAAGATGAAGTGGCAAGTGCTACCTTTAAGATGTGGTTT
GTCGGACACGGGTTTAGCGATGGCAGTCTTGCATCACAAGGAAACAGGAAGCCTGATACA
GAGATAATTACAAGAGTAATGGGACCTGAGGTTGGTTATTTAACAACTCCAATCATTCTT
GTCCAGTGTGCTCTCATTTTGCTCAAGGAACGAAACAATCTTCCAAAAGGAGGTGTTTTC
CCACCTGGGGTTGTGTTTGGCCCAACCGACCTCCAAAACAGGCTTCAACACAATGGAATA
TCTTTTGATGTTATTTCAAAGAAGACAATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002429
PEP Infomation

pacid=37425494 transcript=PGSC0003DMT400003414 locus=PGSC0003DMG402001347 ID=PGSC0003DMT400003414.v4.03 annot-version=v4.03
Sequence

MSQILNPNPTYDVIILGASGFTGKYVIREALKFLDVPSSPLKNLAIAGRNTSKLSQALQW
ASRPNPPPEIPILTADTTDPSSLRDLASQTKIILNCVGPFYLYGEPVVEACADSGCDYLD
ISGEPEFMERIEMKYHDKAVENGSLVVSACGFDSIPAELGLMFNSRQWLPPAVPNSVEAY
LSLESDKRIVKNLGTYESAVLGAANMDKLQELQRSRPKRPRPVIPGPPPKGPLMNHLKEV
GVWAVKLPSADAIVVRRTLSCFAENPHGLPGVNESAEQVERREAFWSSIKPAHFGVKIAS
KSLLGVVRFIIVGLFIGLFGKTSLGRWLLLKFPSLFSLGWFRKKGPTEDEVASATFKMWF
VGHGFSDGSLASQGNRKPDTEIITRVMGPEVGYLTTPIILVQCALILLKERNNLPKGGVF
PPGVVFGPTDLQNRLQHNGISFDVISKKTI*

Transcript Sequence

Transcript ID

PGSC0003DMT400003414
Transcript Infomation

pacid=37425494 locus=PGSC0003DMG402001347 ID=PGSC0003DMT400003414.v4.03 annot-version=v4.03
Sequence

ATGTCTCAGATCCTTAATCCGAATCCAACTTACGACGTGATAATCTTAGGTGCTTCAGGT
TTTACTGGGAAGTACGTCATTAGAGAAGCTCTCAAATTCCTGGACGTTCCCTCTTCCCCC
TTGAAGAATTTAGCCATTGCTGGCCGTAACACTTCAAAGCTTTCCCAGGCTCTTCAATGG
GCTTCCCGTCCAAACCCACCACCCGAAATCCCCATTCTTACTGCCGATACCACTGACCCA
TCTTCTCTCCGTGACCTTGCTTCACAGACTAAGATCATTCTTAACTGTGTCGGACCGTTT
TATCTTTACGGTGAGCCTGTTGTTGAGGCCTGTGCTGATTCTGGATGCGATTACTTGGAT
ATTTCTGGGGAGCCTGAGTTTATGGAGAGGATAGAGATGAAGTACCATGATAAGGCTGTG
GAAAATGGATCCTTAGTTGTTTCGGCATGTGGGTTTGACTCTATTCCTGCTGAATTGGGA
TTGATGTTCAATTCGAGACAGTGGCTGCCGCCGGCTGTTCCTAACAGTGTTGAGGCCTAC
CTTAGTCTAGAATCGGACAAGAGAATTGTTAAAAATTTGGGGACGTATGAGTCAGCGGTG
CTTGGTGCGGCTAATATGGACAAATTACAGGAGCTGCAGCGGAGCAGACCAAAGAGGCCT
CGTCCTGTGATTCCTGGTCCTCCTCCTAAGGGTCCATTGATGAACCATCTAAAGGAAGTT
GGTGTTTGGGCTGTAAAGTTACCATCAGCAGATGCAATTGTAGTCCGAAGAACACTTTCA
TGTTTCGCTGAAAATCCTCATGGTTTACCTGGTGTTAATGAAAGCGCTGAACAAGTTGAG
AGGAGGGAGGCATTTTGGTCAAGCATAAAGCCAGCTCACTTTGGTGTGAAGATAGCTTCA
AAATCTCTGTTAGGAGTTGTTCGTTTCATTATAGTCGGGCTGTTCATTGGTCTCTTTGGT
AAAACTAGTTTAGGGAGGTGGCTGCTATTGAAATTCCCTTCATTGTTCAGTCTTGGATGG
TTCAGGAAAAAAGGTCCAACTGAAGATGAAGTGGCAAGTGCTACCTTTAAGATGTGGTTT
GTCGGACACGGGTTTAGCGATGGCAGTCTTGCATCACAAGGAAACAGGAAGCCTGATACA
GAGATAATTACAAGAGTAATGGGACCTGAGGTTGGTTATTTAACAACTCCAATCATTCTT
GTCCAGTGTGCTCTCATTTTGCTCAAGGAACGAAACAATCTTCCAAAAGGAGGTGTTTTC
CCACCTGGGGTTGTGTTTGGCCCAACCGACCTCCAAAACAGGCTTCAACACAATGGAATA
TCTTTTGATGTTATTTCAAAGAAGACAATCTAA