Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003412
CDS Infomation

pacid=37427968 polypeptide=PGSC0003DMP400002427 locus=PGSC0003DMG401001347 ID=PGSC0003DMT400003412.v4.03 annot-version=v4.03
Sequence

ATGTCTCAGAGCCTTAATCCGAATCCAACTTACGACGTGATAATCTTAGGCGCTTCAGGT
TTTACTGGGAAGTACGTCATTAGAGAAGCTCTCAAATTCCTCAATGTTCCCTCTTCCCCC
TTGAAGAATTTAGCCATTGCTGGCCGTAACACTTCAAAGCTTTCCCAGGCTCTTCAATGG
GCTTCCCGTCCAAACCCACCTCCCGAAATCCCCATTCTCACTGCCAATACCACTGACCCA
TCTTCCCTCCGTGACCTTGCTTCACAGACTAAGATCATTCTTAACTGTGTCGGACCGTTT
CGTCTTTATGGTGAGCCTGTTGTTGAGGCCTGTGCTGATTCTGGATGCGATTACTTGGAT
ATTTCTGGGGAGCCTGAGTTTATGGAGAGGATGGAGGTGAAGTACCATGATAAGGCTGTG
GAAAATGGATCCTTAGTTGTTTCGGCATGTGGGTTTGATTCTATTCCTGCTGAATTGGGA
TTGATGTTCAATTCGAGACAGTGGCTGCCGCCGGCTGTTCCTAACAGTGTTGAGGCCTAC
CTTAGTCTAGAATCGGACAAGAGAATTGTTGGAAATTTGGGGACGTATGAGTCAGCGGTG
CTTGGTGTGGCTAATGTGGACAAATTACAGGAGCTGCGGCGGAGCAGACCAAAGAGGCCT
CGTCCTGTGATTCCTGGTCCTCCTCCTCCTAAAGGTCCGTTGATGGACCACCTAAAGGAA
GTTGGTGTTTGGGCTGTAAAGTTACCATCAGCAGATGCAATTGTAGTCCGAAGAACACTT
TCATGTTTGGCTGAAAATCCTCATGGTTTACCTGGTGTTAATGAAAGCACTGAACAAGTT
GAGAGGAGGGAGACATTTTGGTCAAGCATAAAGCCAGCTCACTTTGGTGTGAAGATAGCT
TCAAAATCTCCGTTAGGAATTGTTCGTTTCATTATAGTCGGGCTGTTCATTGGTCTCTTT
GGTAAAACTGGTTTATGGAGGTGGCTGCTATTGAAATTCCCTTCATTGTTCAGTCTTGGA
TGGTTCAGGAAAAAAGGTCCAACTGAAGATGAAGTGGCAAGTGCTACCTTTAAGATGTGG
TTTGTCGGACATGGGTTTAGCGATGGCAGTCTTGCATCACAAGGAAACATGAAACCTGAT
ACAGAGATAATTACAAGAGTAATGGGACCTGAGATTGGTTATTTAACAACTCCAATCATT
CTTGTCCAGTGTGCTCTCATTTTGCTCAAGGAACGAAACAATCTTCCAAAAGGAGGTGTT
TTCCCACCTGGGGTTGTGTTTGGCCCAACCGACCTCCAAAACAGGCTTCAACACAATGGA
ATATCTTTTGATGTTATTTCAAAGAAGACAATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002427
PEP Infomation

pacid=37427968 transcript=PGSC0003DMT400003412 locus=PGSC0003DMG401001347 ID=PGSC0003DMT400003412.v4.03 annot-version=v4.03
Sequence

MSQSLNPNPTYDVIILGASGFTGKYVIREALKFLNVPSSPLKNLAIAGRNTSKLSQALQW
ASRPNPPPEIPILTANTTDPSSLRDLASQTKIILNCVGPFRLYGEPVVEACADSGCDYLD
ISGEPEFMERMEVKYHDKAVENGSLVVSACGFDSIPAELGLMFNSRQWLPPAVPNSVEAY
LSLESDKRIVGNLGTYESAVLGVANVDKLQELRRSRPKRPRPVIPGPPPPKGPLMDHLKE
VGVWAVKLPSADAIVVRRTLSCLAENPHGLPGVNESTEQVERRETFWSSIKPAHFGVKIA
SKSPLGIVRFIIVGLFIGLFGKTGLWRWLLLKFPSLFSLGWFRKKGPTEDEVASATFKMW
FVGHGFSDGSLASQGNMKPDTEIITRVMGPEIGYLTTPIILVQCALILLKERNNLPKGGV
FPPGVVFGPTDLQNRLQHNGISFDVISKKTI*

Transcript Sequence

Transcript ID

PGSC0003DMT400003412
Transcript Infomation

pacid=37427968 locus=PGSC0003DMG401001347 ID=PGSC0003DMT400003412.v4.03 annot-version=v4.03
Sequence

ATGTCTCAGAGCCTTAATCCGAATCCAACTTACGACGTGATAATCTTAGGCGCTTCAGGT
TTTACTGGGAAGTACGTCATTAGAGAAGCTCTCAAATTCCTCAATGTTCCCTCTTCCCCC
TTGAAGAATTTAGCCATTGCTGGCCGTAACACTTCAAAGCTTTCCCAGGCTCTTCAATGG
GCTTCCCGTCCAAACCCACCTCCCGAAATCCCCATTCTCACTGCCAATACCACTGACCCA
TCTTCCCTCCGTGACCTTGCTTCACAGACTAAGATCATTCTTAACTGTGTCGGACCGTTT
CGTCTTTATGGTGAGCCTGTTGTTGAGGCCTGTGCTGATTCTGGATGCGATTACTTGGAT
ATTTCTGGGGAGCCTGAGTTTATGGAGAGGATGGAGGTGAAGTACCATGATAAGGCTGTG
GAAAATGGATCCTTAGTTGTTTCGGCATGTGGGTTTGATTCTATTCCTGCTGAATTGGGA
TTGATGTTCAATTCGAGACAGTGGCTGCCGCCGGCTGTTCCTAACAGTGTTGAGGCCTAC
CTTAGTCTAGAATCGGACAAGAGAATTGTTGGAAATTTGGGGACGTATGAGTCAGCGGTG
CTTGGTGTGGCTAATGTGGACAAATTACAGGAGCTGCGGCGGAGCAGACCAAAGAGGCCT
CGTCCTGTGATTCCTGGTCCTCCTCCTCCTAAAGGTCCGTTGATGGACCACCTAAAGGAA
GTTGGTGTTTGGGCTGTAAAGTTACCATCAGCAGATGCAATTGTAGTCCGAAGAACACTT
TCATGTTTGGCTGAAAATCCTCATGGTTTACCTGGTGTTAATGAAAGCACTGAACAAGTT
GAGAGGAGGGAGACATTTTGGTCAAGCATAAAGCCAGCTCACTTTGGTGTGAAGATAGCT
TCAAAATCTCCGTTAGGAATTGTTCGTTTCATTATAGTCGGGCTGTTCATTGGTCTCTTT
GGTAAAACTGGTTTATGGAGGTGGCTGCTATTGAAATTCCCTTCATTGTTCAGTCTTGGA
TGGTTCAGGAAAAAAGGTCCAACTGAAGATGAAGTGGCAAGTGCTACCTTTAAGATGTGG
TTTGTCGGACATGGGTTTAGCGATGGCAGTCTTGCATCACAAGGAAACATGAAACCTGAT
ACAGAGATAATTACAAGAGTAATGGGACCTGAGATTGGTTATTTAACAACTCCAATCATT
CTTGTCCAGTGTGCTCTCATTTTGCTCAAGGAACGAAACAATCTTCCAAAAGGAGGTGTT
TTCCCACCTGGGGTTGTGTTTGGCCCAACCGACCTCCAAAACAGGCTTCAACACAATGGA
ATATCTTTTGATGTTATTTCAAAGAAGACAATCTAA