Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003411
CDS Infomation

pacid=37425343 polypeptide=PGSC0003DMP400002426 locus=PGSC0003DMG402001346 ID=PGSC0003DMT400003411.v4.03 annot-version=v4.03
Sequence

ATGGGCACTAAAGTACAATGTAAGACGTACTTGCCAGGATTTTGCTCCATGAGTGATCTA
AATAACAACGGAACTAATACCCCATGGCTCTTAGATCATGAAAATAAGTCAAGGAAAAGA
AGTCAGTGCACTGATTCAATTTTGTCGTCGCAACCAATTGATGGATATTCGGGATGTGAC
AGAGAAAAAATGAGGCAGACAATTCTGGAGCATGAAACAATTTTTAGGCATCAGATCCAA
GAACTCCACCGGCTATATAGAAGACAAAGAGATCTCATGAATGAACATCAAAGGAAAGAA
ATGTTTAACAGTCAAATGAAGATATTCCAGTCTAGTCCCTCATTGTCTCATTTTCCTTCA
TTGGATTCTATAGCTGGCCAGCTATCAATGAAAGATGCTTCTAAGTACAAATCATCCTTT
GATTTTATAGAGAACGATAGTAGGTCCATTCATTTCTCCCCTCAAGTCACAAACAGTTCA
AGGGAATGTGAACCTCACCAGCCTGGTAGTAGTTTGTTCCAGAGAAAAATGTTCAACTCT
AGATATGTAGTTGAAGAGTGCACGAATAACGAAGAAGAACAAACTACTATGAAACAATTG
GGATTAGCTGGCATTCAAGGGAACCCTGCTGAGGGAATTTATCCAATCCCCCGAAGAAGA
GATGTGAAGACACCTAGAGCTTTAGAATTTCATTCTGATGCTGATCTTGACAGAACCAAT
TCCTCAAAAAGGACTGATGAACTGGCTGACTTGAATAAACCTTTACCACTTGAAGAAGAT
CCTCCTTTGGTTCCGGATATCAATATAACCAGCATTACTTGCCTCGAGGATGGCAGCTCT
GATGGGGCGAAGTTCTCTCCTAAGTCACTCAAGGAAAGGATTGGTGGAATTTGCCTCAAC
CACCCGCCTTGCAGGAATGAAGAAGAGCAGTTAACTTTTAAATTTAATGCTGAGCAAAAG
CAACCAGATAACAGATCTTCTGGAAGACTTGAAACTGCTGAAAAGTTACCTAAAGCCTGT
CAGTCATCACAAGGTCATGAACTTTTCAAGCACTCTCTCATTAAGGAAACCAAGAATGAG
CACCCAAAGAAAAGGACAATTTTTGGCGTTGAAATTCATGAAGAAAATCAAGTACAATCT
GCTAGCTTTTCCAATGTGCAAATGCCTACTCATAAATCTCAACCACTTTCTCAGAGTTAT
ACTGAACTTCTGCGAAACCTTGCGGCCTATCAAGGCAATATGCATATGGGAAGTGATGTC
AGATCAGATTCAAGTTCAAAGAATGTACTTCCAGACCAAAATGTTCTTTGTAAAAGATCT
CAGCCAAGTGCTAAAGATTGGACAAATACTTTCAATTGTGTGAATGACATGGATTATAAA
TCTGCTGGGTTAAAGAATGCCAGAGATACTTCTGGTGTATCTCAAACTGAAGCTGCTGGA
AAAACACATGTATCTGGAGATTCTCAGAGGAAACAGGAAAACCCCCGGGAAACATTGCCT
TGGTTAGTCGGGAAATCACAGGAATGTGTAGAGCAGACCAAAGGGAAGGAAAGTTGTTAT
CACTTAAATCTGGACTCCTTGCAGAATTACTCCCAGCAGTTTTTTAGAAGAGAAGACACA
GCAGTCAACTCCTCTCAATTTATAGATCAGAGACGGGGAACCTTGTCATCGATATCCTCC
AAAGGTTCTGAATGCCAGAAAGTTGAAGTTAGTGACAGCACTAAAATAAGGACAATTTTT
GGTGCTCCAATTTTAAGTGCCTCCAAGGACTCGCATGCAGCCCGTTCTCTCTCAAAGGCC
ACTTTTCCTGATATTGACGGTGTTACTGCCACAATCATTTCACGGGATGAGACTGTTTGT
ACAAAGAAGGTGGAAGCTAATGATTTTGTTCAAGAAAAAGGACTAAATGGTTGCACTTCT
GGTTTAAGGTATCAGATTGATTTGAACTTGTCTTTAGATGAAGAAGAGGCACCATCCGCA
CCTCCTCTTCCTCAGGCTGTGGTGAGGATTGCAACCACTGAGATAGACTTAGAGGCTCCA
GCAGTTCTTGAATCTGAAGAAGAATGTGGGAATTCTAAACTTACATTAGAAGAATCTAAC
AAGTCGAGTGAAGAAGCCATGAGGGTTGCTGCAGAGTCTATAATTTCCATCTCAGCGTCT
AGTTCTGTAAATGGAGATACAAATGATGTGTTGCAAACTGAACCTAGTGACTGCCTCAAA
TGGTTTGCTGACTTGGTCTCCTCCCACTCTAGTGGCCAAGAATACATTACTAGAAAGATC
AGCTCAGGTACAGTGTCCGGGTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002426
PEP Infomation

pacid=37425343 transcript=PGSC0003DMT400003411 locus=PGSC0003DMG402001346 ID=PGSC0003DMT400003411.v4.03 annot-version=v4.03
Sequence

MGTKVQCKTYLPGFCSMSDLNNNGTNTPWLLDHENKSRKRSQCTDSILSSQPIDGYSGCD
REKMRQTILEHETIFRHQIQELHRLYRRQRDLMNEHQRKEMFNSQMKIFQSSPSLSHFPS
LDSIAGQLSMKDASKYKSSFDFIENDSRSIHFSPQVTNSSRECEPHQPGSSLFQRKMFNS
RYVVEECTNNEEEQTTMKQLGLAGIQGNPAEGIYPIPRRRDVKTPRALEFHSDADLDRTN
SSKRTDELADLNKPLPLEEDPPLVPDINITSITCLEDGSSDGAKFSPKSLKERIGGICLN
HPPCRNEEEQLTFKFNAEQKQPDNRSSGRLETAEKLPKACQSSQGHELFKHSLIKETKNE
HPKKRTIFGVEIHEENQVQSASFSNVQMPTHKSQPLSQSYTELLRNLAAYQGNMHMGSDV
RSDSSSKNVLPDQNVLCKRSQPSAKDWTNTFNCVNDMDYKSAGLKNARDTSGVSQTEAAG
KTHVSGDSQRKQENPRETLPWLVGKSQECVEQTKGKESCYHLNLDSLQNYSQQFFRREDT
AVNSSQFIDQRRGTLSSISSKGSECQKVEVSDSTKIRTIFGAPILSASKDSHAARSLSKA
TFPDIDGVTATIISRDETVCTKKVEANDFVQEKGLNGCTSGLRYQIDLNLSLDEEEAPSA
PPLPQAVVRIATTEIDLEAPAVLESEEECGNSKLTLEESNKSSEEAMRVAAESIISISAS
SSVNGDTNDVLQTEPSDCLKWFADLVSSHSSGQEYITRKISSGTVSGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400003411
Transcript Infomation

pacid=37425343 locus=PGSC0003DMG402001346 ID=PGSC0003DMT400003411.v4.03 annot-version=v4.03
Sequence

ATGGGCACTAAAGTACAATGTAAGACGTACTTGCCAGGATTTTGCTCCATGAGTGATCTA
AATAACAACGGAACTAATACCCCATGGCTCTTAGATCATGAAAATAAGTCAAGGAAAAGA
AGTCAGTGCACTGATTCAATTTTGTCGTCGCAACCAATTGATGGATATTCGGGATGTGAC
AGAGAAAAAATGAGGCAGACAATTCTGGAGCATGAAACAATTTTTAGGCATCAGATCCAA
GAACTCCACCGGCTATATAGAAGACAAAGAGATCTCATGAATGAACATCAAAGGAAAGAA
ATGTTTAACAGTCAAATGAAGATATTCCAGTCTAGTCCCTCATTGTCTCATTTTCCTTCA
TTGGATTCTATAGCTGGCCAGCTATCAATGAAAGATGCTTCTAAGTACAAATCATCCTTT
GATTTTATAGAGAACGATAGTAGGTCCATTCATTTCTCCCCTCAAGTCACAAACAGTTCA
AGGGAATGTGAACCTCACCAGCCTGGTAGTAGTTTGTTCCAGAGAAAAATGTTCAACTCT
AGATATGTAGTTGAAGAGTGCACGAATAACGAAGAAGAACAAACTACTATGAAACAATTG
GGATTAGCTGGCATTCAAGGGAACCCTGCTGAGGGAATTTATCCAATCCCCCGAAGAAGA
GATGTGAAGACACCTAGAGCTTTAGAATTTCATTCTGATGCTGATCTTGACAGAACCAAT
TCCTCAAAAAGGACTGATGAACTGGCTGACTTGAATAAACCTTTACCACTTGAAGAAGAT
CCTCCTTTGGTTCCGGATATCAATATAACCAGCATTACTTGCCTCGAGGATGGCAGCTCT
GATGGGGCGAAGTTCTCTCCTAAGTCACTCAAGGAAAGGATTGGTGGAATTTGCCTCAAC
CACCCGCCTTGCAGGAATGAAGAAGAGCAGTTAACTTTTAAATTTAATGCTGAGCAAAAG
CAACCAGATAACAGATCTTCTGGAAGACTTGAAACTGCTGAAAAGTTACCTAAAGCCTGT
CAGTCATCACAAGGTCATGAACTTTTCAAGCACTCTCTCATTAAGGAAACCAAGAATGAG
CACCCAAAGAAAAGGACAATTTTTGGCGTTGAAATTCATGAAGAAAATCAAGTACAATCT
GCTAGCTTTTCCAATGTGCAAATGCCTACTCATAAATCTCAACCACTTTCTCAGAGTTAT
ACTGAACTTCTGCGAAACCTTGCGGCCTATCAAGGCAATATGCATATGGGAAGTGATGTC
AGATCAGATTCAAGTTCAAAGAATGTACTTCCAGACCAAAATGTTCTTTGTAAAAGATCT
CAGCCAAGTGCTAAAGATTGGACAAATACTTTCAATTGTGTGAATGACATGGATTATAAA
TCTGCTGGGTTAAAGAATGCCAGAGATACTTCTGGTGTATCTCAAACTGAAGCTGCTGGA
AAAACACATGTATCTGGAGATTCTCAGAGGAAACAGGAAAACCCCCGGGAAACATTGCCT
TGGTTAGTCGGGAAATCACAGGAATGTGTAGAGCAGACCAAAGGGAAGGAAAGTTGTTAT
CACTTAAATCTGGACTCCTTGCAGAATTACTCCCAGCAGTTTTTTAGAAGAGAAGACACA
GCAGTCAACTCCTCTCAATTTATAGATCAGAGACGGGGAACCTTGTCATCGATATCCTCC
AAAGGTTCTGAATGCCAGAAAGTTGAAGTTAGTGACAGCACTAAAATAAGGACAATTTTT
GGTGCTCCAATTTTAAGTGCCTCCAAGGACTCGCATGCAGCCCGTTCTCTCTCAAAGGCC
ACTTTTCCTGATATTGACGGTGTTACTGCCACAATCATTTCACGGGATGAGACTGTTTGT
ACAAAGAAGGTGGAAGCTAATGATTTTGTTCAAGAAAAAGGACTAAATGGTTGCACTTCT
GGTTTAAGGTATCAGATTGATTTGAACTTGTCTTTAGATGAAGAAGAGGCACCATCCGCA
CCTCCTCTTCCTCAGGCTGTGGTGAGGATTGCAACCACTGAGATAGACTTAGAGGCTCCA
GCAGTTCTTGAATCTGAAGAAGAATGTGGGAATTCTAAACTTACATTAGAAGAATCTAAC
AAGTCGAGTGAAGAAGCCATGAGGGTTGCTGCAGAGTCTATAATTTCCATCTCAGCGTCT
AGTTCTGTAAATGGAGATACAAATGATGTGTTGCAAACTGAACCTAGTGACTGCCTCAAA
TGGTTTGCTGACTTGGTCTCCTCCCACTCTAGTGGCCAAGAATACATTACTAGAAAGATC
AGCTCAGGTACAGTGTCCGGGTTTTGA