Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003402
CDS Infomation

pacid=37426632 polypeptide=PGSC0003DMP400002417 locus=PGSC0003DMG400001342 ID=PGSC0003DMT400003402.v4.03 annot-version=v4.03
Sequence

ATGATCCTCTCAGCACTTTTGACTTCTGTTGGAATCAATCTTGGACTTTGTTTTCTGTTC
TTCACATTGTATTCTATATTGAGAAAGCAGCCAGGAAATGCGGAAGTTTATGCACCACGC
TTGGTTGCTCAGGGGAAATCTCAGCAAAGCAGTAATTTCAATTTGGAGAGACTTTTGCCG
TCTGCTGGTTGGGTGACGAGAGCATGGCGACCCTCAGAAGCAGAGCTCTTATCCACCTCG
GGCTTGGATGCTGTTGTTTTCATGCGCATTTTTATATTCAGTGCTAGAGTTTTTACCTTT
GCTGTCATCGTGGGGATTTTCATTCTTCTGCCTATCAATTACATGGGGAAACAACTAAGT
CTTGATTTGTTTGACTTGCCCAACAAGTCTCTGGAATCATTCACTATCTCAAATGTTGAC
GACGGATCAAACAGGTTATGGATCCATTTCTCAGCTGTGTATGTCCTCACGGCAGTTGTT
TGCTATCTTCTTTACTTTGAGTATGACTATATTTCATCAAAGAGAATTTCTTACTTTTAT
TCATCAAAACCTCATCCACATCAGTTTACCATTTTAGTTCGAAGTATTCCAGCTTCATCA
GGAAGAAGTTACAGTGAAACAGTTGAAAGTTTTTTTTCAGAGTATTATCCTGCTACATAT
CTTTCACACTGGGTTGTCCGGCGAGCAAGCAAACTCCAAGATCTCATTAAAAATTCTAAA
AGGTTGTACAGAAGGCTTGTGAACTTGAAATCAGCCAACCCTGATCGAGAAAGGTTCGGG
CGTGCTGGTTTCATGGGCCTTTTTGGACAGAGAGTTGATCTACTTGATCACTATGAAAAG
AAGCTCGAAGTTATCGAAGACAATGTAAGGGCCGAACAATCTTCATGTCTGGGAAAGGAG
GTAGGAGCTGCTTTTGTATCTTTCAGGACACGTTTTGCCGCAGCTTCAGCTATACACATG
CAGCAAGGTGTAAATCCTACACAATGGGTCACTGAGACAGCTCCTGATCCAGAGGATGTG
TATTGGCCTTTCTTTTCAGCATCATTTCTAAAGAGATGGATTAGCAACCTGGTGGTTGTT
GTGGCATGCGTCCTCCTTACGGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTT
ACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGCTTGCTTAGAATAGCA
TTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTAT
GTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAG
ATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTCTTTGCA
AATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATT
CCTGCCATATTAGCTGTAGCAGTTCCAGGACAGGCAACTTTCTTTATCGCTTATGTGGTT
ACATCAGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCAACACTCGTTTCCAAT
TTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCT
TACCACAGTGAGATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTC
CTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTACCTCATCTAC
CGGAACCAGCTTCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCT
ATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATA
TTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACT
CTTGTGTTCAACAGCTATTGTAGGAGACGTTTCCTACCTATGTTCAAGTCTTATTCAGTC
GAGAGCTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCGACAATAGCAAGTTTTCAT
GAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTACATGGCGGATATTCTGGAAAT
AGTGCAAGTATCATCGCCCCCCTTCTTAGTACTGCTGAAGTTGATGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400002417
PEP Infomation

pacid=37426632 transcript=PGSC0003DMT400003402 locus=PGSC0003DMG400001342 ID=PGSC0003DMT400003402.v4.03 annot-version=v4.03
Sequence

MILSALLTSVGINLGLCFLFFTLYSILRKQPGNAEVYAPRLVAQGKSQQSSNFNLERLLP
SAGWVTRAWRPSEAELLSTSGLDAVVFMRIFIFSARVFTFAVIVGIFILLPINYMGKQLS
LDLFDLPNKSLESFTISNVDDGSNRLWIHFSAVYVLTAVVCYLLYFEYDYISSKRISYFY
SSKPHPHQFTILVRSIPASSGRSYSETVESFFSEYYPATYLSHWVVRRASKLQDLIKNSK
RLYRRLVNLKSANPDRERFGRAGFMGLFGQRVDLLDHYEKKLEVIEDNVRAEQSSCLGKE
VGAAFVSFRTRFAAASAIHMQQGVNPTQWVTETAPDPEDVYWPFFSASFLKRWISNLVVV
VACVLLTVLFLIPVLIVQGLTHLEQLEIWFPFLKGLLRIAFVSQVITGYLPSLVLQLFLY
VVPSIMIMFSSIQGYIAMSQIEKSACIKVLWFTIWNIFFANVLSGSALYRVEIFLEPKNI
PAILAVAVPGQATFFIAYVVTSGWTSTSSELFQLSTLVSNFIKRNICRKYDDEFEVPSVP
YHSEIPRILLFGLLGITYFFLAPLILPFLLVYYCLGYLIYRNQLLNVYAPKYETGGKLWP
IVHDSMIFSLILMHVIAIGIFGLKKLPLASSLTVPLPILTLVFNSYCRRRFLPMFKSYSV
ESLLKKDKEEQNDPTIASFHERLATAYQDPALLHGGYSGNSASIIAPLLSTAEVDA*

Transcript Sequence

Transcript ID

PGSC0003DMT400003402
Transcript Infomation

pacid=37426632 locus=PGSC0003DMG400001342 ID=PGSC0003DMT400003402.v4.03 annot-version=v4.03
Sequence

ATGATCCTCTCAGCACTTTTGACTTCTGTTGGAATCAATCTTGGACTTTGTTTTCTGTTC
TTCACATTGTATTCTATATTGAGAAAGCAGCCAGGAAATGCGGAAGTTTATGCACCACGC
TTGGTTGCTCAGGGGAAATCTCAGCAAAGCAGTAATTTCAATTTGGAGAGACTTTTGCCG
TCTGCTGGTTGGGTGACGAGAGCATGGCGACCCTCAGAAGCAGAGCTCTTATCCACCTCG
GGCTTGGATGCTGTTGTTTTCATGCGCATTTTTATATTCAGTGCTAGAGTTTTTACCTTT
GCTGTCATCGTGGGGATTTTCATTCTTCTGCCTATCAATTACATGGGGAAACAACTAAGT
CTTGATTTGTTTGACTTGCCCAACAAGTCTCTGGAATCATTCACTATCTCAAATGTTGAC
GACGGATCAAACAGGTTATGGATCCATTTCTCAGCTGTGTATGTCCTCACGGCAGTTGTT
TGCTATCTTCTTTACTTTGAGTATGACTATATTTCATCAAAGAGAATTTCTTACTTTTAT
TCATCAAAACCTCATCCACATCAGTTTACCATTTTAGTTCGAAGTATTCCAGCTTCATCA
GGAAGAAGTTACAGTGAAACAGTTGAAAGTTTTTTTTCAGAGTATTATCCTGCTACATAT
CTTTCACACTGGGTTGTCCGGCGAGCAAGCAAACTCCAAGATCTCATTAAAAATTCTAAA
AGGTTGTACAGAAGGCTTGTGAACTTGAAATCAGCCAACCCTGATCGAGAAAGGTTCGGG
CGTGCTGGTTTCATGGGCCTTTTTGGACAGAGAGTTGATCTACTTGATCACTATGAAAAG
AAGCTCGAAGTTATCGAAGACAATGTAAGGGCCGAACAATCTTCATGTCTGGGAAAGGAG
GTAGGAGCTGCTTTTGTATCTTTCAGGACACGTTTTGCCGCAGCTTCAGCTATACACATG
CAGCAAGGTGTAAATCCTACACAATGGGTCACTGAGACAGCTCCTGATCCAGAGGATGTG
TATTGGCCTTTCTTTTCAGCATCATTTCTAAAGAGATGGATTAGCAACCTGGTGGTTGTT
GTGGCATGCGTCCTCCTTACGGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTT
ACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGCTTGCTTAGAATAGCA
TTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTAT
GTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAG
ATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTCTTTGCA
AATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATT
CCTGCCATATTAGCTGTAGCAGTTCCAGGACAGGCAACTTTCTTTATCGCTTATGTGGTT
ACATCAGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCAACACTCGTTTCCAAT
TTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCT
TACCACAGTGAGATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTC
CTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTACCTCATCTAC
CGGAACCAGCTTCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCT
ATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATA
TTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACT
CTTGTGTTCAACAGCTATTGTAGGAGACGTTTCCTACCTATGTTCAAGTCTTATTCAGTC
GAGAGCTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCGACAATAGCAAGTTTTCAT
GAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTACATGGCGGATATTCTGGAAAT
AGTGCAAGTATCATCGCCCCCCTTCTTAGTACTGCTGAAGTTGATGCTTAG