Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003382
CDS Infomation

pacid=37427830 polypeptide=PGSC0003DMP400002398 locus=PGSC0003DMG400001339 ID=PGSC0003DMT400003382.v4.03 annot-version=v4.03
Sequence

ATGGGTCGATCTCCGTGTTGTGATAAAGTTGGCCTGAAAAAAGGACCTTGGACACCTGAA
GAAGATCAAAAACTCTTAGCTTATATCGAAGAACATGGTCATGGTAGCTGGCGCGCATTA
CCTGCCAAAGCTGGACTTCAAAGATGTGGTAAGAGTTGCAGGCTCAGGTGGACTAATTAC
CTTAGGCCTGATATCAAGAGAGGAAAATTCACTTTACAAGAAGAACAAACCATCATTCAA
CTTCATGCTCTCTTAGGGAATAGGTGGTCGGCCATAGCCACTCATTTACCTAAACGAACA
GATAACGAAATCAAGAACTATTGGAATACTCATCTTAAGAAACGGCTAGTGAAAATGGGG
ATCGACCCGGTAACCCACAAGCCGAAGAACGATGCCTTGTTGTCCAATGACGGTCAGTCT
AAGAACGCGGCTAACCTTAGCCACATGGCTCAGTGGGAAAGTGCCCGGCTTGAAGCCGAA
GCTAGACTCGCTAGACAATCTAAACTCCGTTCCAATAGTTTCCAAAATTCACTCGCTTCT
CAAGAATTTACCGCTCCTTCACCTTCTAGTCCTCTTAGCAAACCCGTTATGGGCCCAGCA
CGTTGTCTCAACGTGTTGAAAGCCTGGAACGGTGTTTGGACCAAACCAATAAATGAAGGT
TCCATCGCGAGTGCTAGTGCTGGTATTTCAGTCACTGGAGCACTCGCGAGGGATTTGGAA
TCTCCTACGTCTACACTAGGCTATTTTGAAAATGCGCAACATATTTCATCATCAGGAATT
GGAGCAAGTTCGAATACAGTTTTGTATGAATTTGTTGGAAATTCATCAGGCTCTAGTGAA
GGTGGAATTATGAATAATGAGGAAAGTGAAGAAGATTGGAAGGAATTTGGAAACTCATCA
ACTGGACATTTGCCTCAATACAATAAAGATGTTATTAATGAAAATTCAATTTCATTCACA
TCAGGACTACAAGATTTAACTCTACCAATGGACACAACATGGACAGCAGAGTCGTTAAGG
TCAAATACAGAACAAATTTCCCCTGCCAATTTTGTGGAGACATTTACAGATCTATTGCTT
AGCAATTCCGGCGATGGCGATTTATCGGAAGGCGGTGGCACGGAATCCGATAACGGAGGG
GAAGGTAGTGGCAGTGGAAATGCAAGTGAGAACTGTGAAGATAACAAGAATTACTGGAAT
AGTATCTTTAACTTAGTGAATAATCCTTCTCCGTCTGATTCAGCTATGTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002398
PEP Infomation

pacid=37427830 transcript=PGSC0003DMT400003382 locus=PGSC0003DMG400001339 ID=PGSC0003DMT400003382.v4.03 annot-version=v4.03
Sequence

MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNY
LRPDIKRGKFTLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMG
IDPVTHKPKNDALLSNDGQSKNAANLSHMAQWESARLEAEARLARQSKLRSNSFQNSLAS
QEFTAPSPSSPLSKPVMGPARCLNVLKAWNGVWTKPINEGSIASASAGISVTGALARDLE
SPTSTLGYFENAQHISSSGIGASSNTVLYEFVGNSSGSSEGGIMNNEESEEDWKEFGNSS
TGHLPQYNKDVINENSISFTSGLQDLTLPMDTTWTAESLRSNTEQISPANFVETFTDLLL
SNSGDGDLSEGGGTESDNGGEGSGSGNASENCEDNKNYWNSIFNLVNNPSPSDSAMF*

Transcript Sequence

Transcript ID

PGSC0003DMT400003382
Transcript Infomation

pacid=37427830 locus=PGSC0003DMG400001339 ID=PGSC0003DMT400003382.v4.03 annot-version=v4.03
Sequence

ATGGGTCGATCTCCGTGTTGTGATAAAGTTGGCCTGAAAAAAGGACCTTGGACACCTGAA
GAAGATCAAAAACTCTTAGCTTATATCGAAGAACATGGTCATGGTAGCTGGCGCGCATTA
CCTGCCAAAGCTGGACTTCAAAGATGTGGTAAGAGTTGCAGGCTCAGGTGGACTAATTAC
CTTAGGCCTGATATCAAGAGAGGAAAATTCACTTTACAAGAAGAACAAACCATCATTCAA
CTTCATGCTCTCTTAGGGAATAGGTGGTCGGCCATAGCCACTCATTTACCTAAACGAACA
GATAACGAAATCAAGAACTATTGGAATACTCATCTTAAGAAACGGCTAGTGAAAATGGGG
ATCGACCCGGTAACCCACAAGCCGAAGAACGATGCCTTGTTGTCCAATGACGGTCAGTCT
AAGAACGCGGCTAACCTTAGCCACATGGCTCAGTGGGAAAGTGCCCGGCTTGAAGCCGAA
GCTAGACTCGCTAGACAATCTAAACTCCGTTCCAATAGTTTCCAAAATTCACTCGCTTCT
CAAGAATTTACCGCTCCTTCACCTTCTAGTCCTCTTAGCAAACCCGTTATGGGCCCAGCA
CGTTGTCTCAACGTGTTGAAAGCCTGGAACGGTGTTTGGACCAAACCAATAAATGAAGGT
TCCATCGCGAGTGCTAGTGCTGGTATTTCAGTCACTGGAGCACTCGCGAGGGATTTGGAA
TCTCCTACGTCTACACTAGGCTATTTTGAAAATGCGCAACATATTTCATCATCAGGAATT
GGAGCAAGTTCGAATACAGTTTTGTATGAATTTGTTGGAAATTCATCAGGCTCTAGTGAA
GGTGGAATTATGAATAATGAGGAAAGTGAAGAAGATTGGAAGGAATTTGGAAACTCATCA
ACTGGACATTTGCCTCAATACAATAAAGATGTTATTAATGAAAATTCAATTTCATTCACA
TCAGGACTACAAGATTTAACTCTACCAATGGACACAACATGGACAGCAGAGTCGTTAAGG
TCAAATACAGAACAAATTTCCCCTGCCAATTTTGTGGAGACATTTACAGATCTATTGCTT
AGCAATTCCGGCGATGGCGATTTATCGGAAGGCGGTGGCACGGAATCCGATAACGGAGGG
GAAGGTAGTGGCAGTGGAAATGCAAGTGAGAACTGTGAAGATAACAAGAATTACTGGAAT
AGTATCTTTAACTTAGTGAATAATCCTTCTCCGTCTGATTCAGCTATGTTCTAA