Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003371
CDS Infomation

pacid=37426673 polypeptide=PGSC0003DMP400002393 locus=PGSC0003DMG400001335 ID=PGSC0003DMT400003371.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTCAACGAAATAGCTATGGGAAACGCTCCCATTCACAGTCTGATTATGCTGAC
AATGGGAGAAATAAAAGGAGAAATACTGGCTCTGATAAGGACCTTTTCTCAATCGGTCCT
GACGACACAGTTTATCGGTACTTATGCGCTGGAAAGAAGATTGGAAGTATTATCGGCAGG
GGAGGTGAGATTGTTAAGCAATTAAGGGTGGACACTAAATCTAAAATCAGGATTGGTGAG
ACTGTGCCTGACTGTGAGGAACGTGTTGTCACTATCTACAGCGCAAGTGAGGAAACAAAC
AACTTTGATGGCTCTGAAAATTGTATTTGTCCTGCCCAGGATGCACTTTTTAAAGTCCAT
GAGAAAATTGTTAGCGAGACAATTGATGAGGATTCTGAGAATGCCCCCCAGGTTACCATT
AGGCTTCTAGTACCTTCAGATCAGATTGGATGTGTTATTGGGAAAGGGGGTCAGATAGTA
CAGAACATTCGTAGTGAAAGTGGTGCTCAGATTCGTATATTGAAAGATAACCATTTGCCT
GCATGTGCATTGAGCTCGGATGAACTTTTGCAGATATCTGGTGAAGCCACTGTAGTGAAG
AAGGCTCTTTATGAAATAGCAACGCGTCTTCATAAGAATCCATCTCGTTCTCAGAACTTG
CTTGCTTCTGCTGCACCAAATATCTACTCTTCGAGTTCACTTGTAGGTCATACTGCTGGT
GCTCCAATTGTAGGCATGGCCTCATTAATGGGGTCTTATAGGGGATACAAAGGAGAGAGT
GGGGACTTATCAAGGTCTTTTTACTCTGCTCCAAGGAATGAGTCATCTTCAAAGGAATTT
TCTATCTGTTTGCTGTGTCCTACAGCAAATATTGGTGGTGTTATTGGTAAAGGTGGTGTC
ATAATCAATCAAATTAGACAGGAATCTGGTGCAGCAATCAAAGTAGATAGTTTTGCTGCT
GAAGGTGATGATTGCGTGATTTCAATTTCTGTGAAAGAGTTTTTTGAGGACACATATTCT
CCTACTGTTGAAGCAGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTTGATAAAGAT
TCTGGTCTTACACCATTAACCACGAGATTGCTGGTCCCAACATCTCGAATAGGCTGTCTT
ATTGGAAAAGGAGGCACCATAATCAATGAGATGAGGAAAATTACGAAAGCTAATATCCGT
ATACTCTCCAAAGAAGGCCTCCCAAAGGTTGCTGCTGAAGATGATGAGATGGTGCAGATC
TCAGGAGAACTTGATGTTGTAAAGGATGCACTCATACAAGTAACTTCACGTTTGAGGGCA
AACCTTTTTGAAAGAGAGGGTGCTGCATCTGCCTTTGTGCCAGTTCTTCCCTACCTCCCC
ATGACTACAGGTTCAGATACCTTGAAACATGAAAGTAGGGACTCTAGAAGACATGGACAT
TCTTACTCAGCTGGGTATGGTGGTACGACTGATCTTCCACGTGCTGATGGTTATGGAAGT
TACAGTGGTATCCAGAGTAGCAGCATAGGATATGGAGCTTATGAAGGATATTCCCTTGGG
CGTTCTGGTGGTTCTAGGTCATCGGGGCAAGACCCTGCTTCCCGGAGAAAAAGTTATGGT
TACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400002393
PEP Infomation

pacid=37426673 transcript=PGSC0003DMT400003371 locus=PGSC0003DMG400001335 ID=PGSC0003DMT400003371.v4.03 annot-version=v4.03
Sequence

MAGQRNSYGKRSHSQSDYADNGRNKRRNTGSDKDLFSIGPDDTVYRYLCAGKKIGSIIGR
GGEIVKQLRVDTKSKIRIGETVPDCEERVVTIYSASEETNNFDGSENCICPAQDALFKVH
EKIVSETIDEDSENAPQVTIRLLVPSDQIGCVIGKGGQIVQNIRSESGAQIRILKDNHLP
ACALSSDELLQISGEATVVKKALYEIATRLHKNPSRSQNLLASAAPNIYSSSSLVGHTAG
APIVGMASLMGSYRGYKGESGDLSRSFYSAPRNESSSKEFSICLLCPTANIGGVIGKGGV
IINQIRQESGAAIKVDSFAAEGDDCVISISVKEFFEDTYSPTVEAALRLQPRCSEKVDKD
SGLTPLTTRLLVPTSRIGCLIGKGGTIINEMRKITKANIRILSKEGLPKVAAEDDEMVQI
SGELDVVKDALIQVTSRLRANLFEREGAASAFVPVLPYLPMTTGSDTLKHESRDSRRHGH
SYSAGYGGTTDLPRADGYGSYSGIQSSSIGYGAYEGYSLGRSGGSRSSGQDPASRRKSYG
Y*

Transcript Sequence

Transcript ID

PGSC0003DMT400003371
Transcript Infomation

pacid=37426673 locus=PGSC0003DMG400001335 ID=PGSC0003DMT400003371.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTCAACGAAATAGCTATGGGAAACGCTCCCATTCACAGTCTGATTATGCTGAC
AATGGGAGAAATAAAAGGAGAAATACTGGCTCTGATAAGGACCTTTTCTCAATCGGTCCT
GACGACACAGTTTATCGGTACTTATGCGCTGGAAAGAAGATTGGAAGTATTATCGGCAGG
GGAGGTGAGATTGTTAAGCAATTAAGGGTGGACACTAAATCTAAAATCAGGATTGGTGAG
ACTGTGCCTGACTGTGAGGAACGTGTTGTCACTATCTACAGCGCAAGTGAGGAAACAAAC
AACTTTGATGGCTCTGAAAATTGTATTTGTCCTGCCCAGGATGCACTTTTTAAAGTCCAT
GAGAAAATTGTTAGCGAGACAATTGATGAGGATTCTGAGAATGCCCCCCAGGTTACCATT
AGGCTTCTAGTACCTTCAGATCAGATTGGATGTGTTATTGGGAAAGGGGGTCAGATAGTA
CAGAACATTCGTAGTGAAAGTGGTGCTCAGATTCGTATATTGAAAGATAACCATTTGCCT
GCATGTGCATTGAGCTCGGATGAACTTTTGCAGATATCTGGTGAAGCCACTGTAGTGAAG
AAGGCTCTTTATGAAATAGCAACGCGTCTTCATAAGAATCCATCTCGTTCTCAGAACTTG
CTTGCTTCTGCTGCACCAAATATCTACTCTTCGAGTTCACTTGTAGGTCATACTGCTGGT
GCTCCAATTGTAGGCATGGCCTCATTAATGGGGTCTTATAGGGGATACAAAGGAGAGAGT
GGGGACTTATCAAGGTCTTTTTACTCTGCTCCAAGGAATGAGTCATCTTCAAAGGAATTT
TCTATCTGTTTGCTGTGTCCTACAGCAAATATTGGTGGTGTTATTGGTAAAGGTGGTGTC
ATAATCAATCAAATTAGACAGGAATCTGGTGCAGCAATCAAAGTAGATAGTTTTGCTGCT
GAAGGTGATGATTGCGTGATTTCAATTTCTGTGAAAGAGTTTTTTGAGGACACATATTCT
CCTACTGTTGAAGCAGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTTGATAAAGAT
TCTGGTCTTACACCATTAACCACGAGATTGCTGGTCCCAACATCTCGAATAGGCTGTCTT
ATTGGAAAAGGAGGCACCATAATCAATGAGATGAGGAAAATTACGAAAGCTAATATCCGT
ATACTCTCCAAAGAAGGCCTCCCAAAGGTTGCTGCTGAAGATGATGAGATGGTGCAGATC
TCAGGAGAACTTGATGTTGTAAAGGATGCACTCATACAAGTAACTTCACGTTTGAGGGCA
AACCTTTTTGAAAGAGAGGGTGCTGCATCTGCCTTTGTGCCAGTTCTTCCCTACCTCCCC
ATGACTACAGGTTCAGATACCTTGAAACATGAAAGTAGGGACTCTAGAAGACATGGACAT
TCTTACTCAGCTGGGTATGGTGGTACGACTGATCTTCCACGTGCTGATGGTTATGGAAGT
TACAGTGGTATCCAGAGTAGCAGCATAGGATATGGAGCTTATGAAGGATATTCCCTTGGG
CGTTCTGGTGGTTCTAGGTCATCGGGGCAAGACCCTGCTTCCCGGAGAAAAAGTTATGGT
TACTAG