Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003351
CDS Infomation

pacid=37424671 polypeptide=PGSC0003DMP400002381 locus=PGSC0003DMG400001326 ID=PGSC0003DMT400003351.v4.03 annot-version=v4.03
Sequence

ATGGCTGTAGATAAGGAATTCTCAAACTCCCACGAATCCAAAAATGAGTCATCTCATCCT
GGATCTAGACCTCCCAGGCTATTCATTAAAGAGATGGTGATGAGAAACTTCAAATCTTAT
GCGGGCGAACAGCGCGTTGGCCCATTCCATAAGAGCTTTTCTGCAGTTGTTGGTCCTAAT
GGTAGTGGAAAGAGTAATGTCATCGACGCAATGCTCTTCGTCTTCGGAAAGCGGGCCAAA
CAGATGCGTCTAAACAAAGTGTCAGAGCTCATCCACAATTCAACTAACCACCAGAATTTG
GATAGTGCTGGCGTGTCTGTTCATTTTCAGGAGATTATTGATTTGGATGATGAGACATAT
GAAGCTGTTCCTGGAAGTGATTTTGTAATTACACGTGTGGCATTTCGAGATAATTCCTCT
AAGTACTATATCAATGACCGGACAAGTAACTTCACAGAGGTCACTAAGATGCTGAAAGGG
AAAGGGATTGATCTAGATAACAACCGATTTTTGATTCTTCAGGGTGAGGTTGAACAAATA
TCACTGATGAAACCTAGAGGACAAGGACCACATGATGAAGGCTTTCTTGAGTATTTAGAG
GATATTATCGGAACCGAAAAATACGTTGAGAAGATTGATGAATCATTCAAGCAGCTAGAA
TCCCTCAATGAAAGAAGGTCTGGTGTTGTTCAAATGGTTAAGTTAGCTGAGAAAGAAAGA
GATAACTTGGAGGGAGTAAAAAATGACGCAGAAGCCTACATGCTTAAAGAATTATCACTT
CTCAAATGGCAAGAGAAAGCAACAAAATTGGCTTTTGAAGATAATTCAACTCGAATTACG
GAGATGCAGGCGAACATTTCTAGACAAGAAGAGAACCTTAAAAGTGAAAGGGAGAAAATT
AAGGAAAATAGCAAGGCATTGAAGGACCTTGAGTCAAAGCATTCAAAGTTTCTGAAAAGA
CAAGAGGAGCTTGATAACAGTCTAAGGCGCTGCAAGGATGAGTTCAAGGAATTTGAGAGG
CAAGATGTAAAGTATCGAGAAGATTTAAATCACTTGAAGCAGAAGATAAAGAAACTGACT
GATAAAATTGATAAGGATTCTCGTAAAATTGCTGACACAACTAATGAGTGCGAGGAGTCT
GCAAATCTTATTCCAAAATTGGAGAAAGATATTCCAAGCTTGCAACAACTTTTGGTGGGT
GAGGAGAAATTTTTAGAGGAAATAAAGGAGAATTCTAAAGTTGAAACCGAGGCTTTCCGC
AGTGAGCTTTCTGCTGTTCGATCTGAATTAGAGCCTTGGGAAAAGCACTTAATTGAGCAC
AAGGGAAAGCTTGAAGTGGCATCAACTGAAAGTAAACTTTTGAGTGAGAAGCATGAGGCT
GGTCGTGCTGCGTATATTGAAGCACAAGAGCAGATTGTGGAAATACAGAAACGAGTAGAG
ATGAAATCGGCAAGCACAAAAAACATCGCCAATGAGCTTGAGAAGCACAAGCTTAAAGCA
CTTGAGGCTCGAGCTGTTGAAAAGGAATGCCTTCAAGAACAAGAAAGATTGATACCTCTA
GAACAAGCTGCCAGACAAAAGCTTACTGAGCTTTCATCTGTTATGGAATCTGAGAAGAGC
CAGGGATCTGTCCTAAAAGCAATAATGCATGCTAAGGAGGCAAATGTGATAGATGGCATT
TATGGTCGAATGGGTGACTTGGGTGCGATTGATGCAAAGTATGATGTTGCCATATCAACC
GCATGTGCTGGGCTTGAATATATTGTTGTAGAAACTACAGAAGCAGCACAAGCTTGCGTG
GAGCTTCTTCGAAGCAAAACCCTTGGTGTAGCAACTTTCATGATTTTGGAAAAACAAGCT
CATTATTTGCCTAAAATCAAAGAGAGAGTCAGAACGCCAGAAGGAGTCCCACGCCTTTTT
GATTTGGTTAAGGTCCGAGATGAGAGGATGAAACTAGCATTTTTTGCGGCATTAGGAAAT
ACAGTTGTTGCAGAAGATATTGATCAGGCATCACGTATTGCCTATGGTGGGGACAGAGAG
TTTCGCCGTGTTGTAACACTTGAAGGTGCTCTTTTTGAAAAATCTGGAACAATGAGTGGT
GGAGGGGGTAAACCTCGTGGTGGTAAAATGGGCACATCTATCCGTGCTGCTAGTGTTTCA
CCAGAGGCTATATCTGCTGCTGAAATAGAACTTTCACAGATAGCCGAAAACTTGGATAAT
GTACGCCAAAGAATTACTGATGCTGTGAAGTGTTACCAGGCCTCAGAGAAGGCTCTTTCT
CTTGGCGAGATGGAATTAGCCAAATGCAAAAAAGAGATTGACAGCCTGAAGTCCCAATGT
GATGATCTAAAAAAGCAACTGGATTCCTTGAGAAGTGCATCAGAACCTAGTAAGGATGAA
GTTAATAGATTGAAGGAACTCAAGAAAATAATTTCTGCTGAAGAAAAAGAAATGGACAGG
CTTACACAAGGTTCAAAACAGCTGAAAGAGAAGGCTTCAGAACTTCAGAATAAAATAGAG
AATGCAGGTGGCGAGCGATTGAAAAATCAAAAGGCAAAGGTTACTAAAATACAATCTGAT
ATCGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAA
ATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAGTCTACTT
GCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTT
CAGGAGGACTATAAAAAGATACAGGAGCTCATTGATCAGCACAAAGATGCTCTGAATGGT
GCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATGAGATGCGGTCATCAGAGGTA
GATGCGGACTACAAGTTACAAGATATGAAGAAGGTTTATAAAGACTTGGAACTCAAAGGG
AAAGGATACAAGAAAAAACTCGATGATTTGCATAGTGCTCTGTCAAAGCATATTGAGCAA
ATTCAAAAAGACTTGGTGGACCCGGAAAAGCTTCAGGCAACTCTAAGTGACGAAACTCTT
GGTCAGACTTGTGATCTTAAGACAGCTCTTGAGACAATTTCACTTCTAGAGGCTCAACTG
AAAGAGATAAACCCAAATCTTGACTCAATTTCTGAGTATCGGAAGAAAGTATCTGTGTAC
AATGAAAGAGTTCAAGAGCTTAATTCTGTTACTCAAGAGCGTGATGATATTAAAAAACAA
TATGATGAGTGGAGAAAGAGAAGGTTGGATGAGTTCATGGAGGGCTTTAATACCATATCT
TTGAAGCTTAAAGAAATGTATCAGATGATCACTCTTGGAGGCGACGCAGAACTGGAATTA
GTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAA
AGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAGACCCTCAGCTCATTGGCTCTT
GTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCT
GCTTTGGATTTTAAGAATGTCTCAATCGTGGGGCATTATGTCAAGGACAGAACTAAAGAT
GCACAGTTCATAATCATAAGCCTTAGAAACAATATGTTTGAGCTAGCAGATAGGCTAGTT
GGAATCTACAAAACGGATAACTGCACCAAGAGCATTACTATCAATCCAGGAAGCTTTGTA
GTTTCTCAGAAAGTTGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002381
PEP Infomation

pacid=37424671 transcript=PGSC0003DMT400003351 locus=PGSC0003DMG400001326 ID=PGSC0003DMT400003351.v4.03 annot-version=v4.03
Sequence

MAVDKEFSNSHESKNESSHPGSRPPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPN
GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDETY
EAVPGSDFVITRVAFRDNSSKYYINDRTSNFTEVTKMLKGKGIDLDNNRFLILQGEVEQI
SLMKPRGQGPHDEGFLEYLEDIIGTEKYVEKIDESFKQLESLNERRSGVVQMVKLAEKER
DNLEGVKNDAEAYMLKELSLLKWQEKATKLAFEDNSTRITEMQANISRQEENLKSEREKI
KENSKALKDLESKHSKFLKRQEELDNSLRRCKDEFKEFERQDVKYREDLNHLKQKIKKLT
DKIDKDSRKIADTTNECEESANLIPKLEKDIPSLQQLLVGEEKFLEEIKENSKVETEAFR
SELSAVRSELEPWEKHLIEHKGKLEVASTESKLLSEKHEAGRAAYIEAQEQIVEIQKRVE
MKSASTKNIANELEKHKLKALEARAVEKECLQEQERLIPLEQAARQKLTELSSVMESEKS
QGSVLKAIMHAKEANVIDGIYGRMGDLGAIDAKYDVAISTACAGLEYIVVETTEAAQACV
ELLRSKTLGVATFMILEKQAHYLPKIKERVRTPEGVPRLFDLVKVRDERMKLAFFAALGN
TVVAEDIDQASRIAYGGDREFRRVVTLEGALFEKSGTMSGGGGKPRGGKMGTSIRAASVS
PEAISAAEIELSQIAENLDNVRQRITDAVKCYQASEKALSLGEMELAKCKKEIDSLKSQC
DDLKKQLDSLRSASEPSKDEVNRLKELKKIISAEEKEMDRLTQGSKQLKEKASELQNKIE
NAGGERLKNQKAKVTKIQSDIDKKSTEINRRKVQIETGQKMIKKLTKGIEESNKEKESLL
AEKEKLLSIFKEVEQKAFTVQEDYKKIQELIDQHKDALNGAKNEYENLKKTMDEMRSSEV
DADYKLQDMKKVYKDLELKGKGYKKKLDDLHSALSKHIEQIQKDLVDPEKLQATLSDETL
GQTCDLKTALETISLLEAQLKEINPNLDSISEYRKKVSVYNERVQELNSVTQERDDIKKQ
YDEWRKRRLDEFMEGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKK
SWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKD
AQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVSQKVA*

Transcript Sequence

Transcript ID

PGSC0003DMT400003351
Transcript Infomation

pacid=37424671 locus=PGSC0003DMG400001326 ID=PGSC0003DMT400003351.v4.03 annot-version=v4.03
Sequence

ATGGCTGTAGATAAGGAATTCTCAAACTCCCACGAATCCAAAAATGAGTCATCTCATCCT
GGATCTAGACCTCCCAGGCTATTCATTAAAGAGATGGTGATGAGAAACTTCAAATCTTAT
GCGGGCGAACAGCGCGTTGGCCCATTCCATAAGAGCTTTTCTGCAGTTGTTGGTCCTAAT
GGTAGTGGAAAGAGTAATGTCATCGACGCAATGCTCTTCGTCTTCGGAAAGCGGGCCAAA
CAGATGCGTCTAAACAAAGTGTCAGAGCTCATCCACAATTCAACTAACCACCAGAATTTG
GATAGTGCTGGCGTGTCTGTTCATTTTCAGGAGATTATTGATTTGGATGATGAGACATAT
GAAGCTGTTCCTGGAAGTGATTTTGTAATTACACGTGTGGCATTTCGAGATAATTCCTCT
AAGTACTATATCAATGACCGGACAAGTAACTTCACAGAGGTCACTAAGATGCTGAAAGGG
AAAGGGATTGATCTAGATAACAACCGATTTTTGATTCTTCAGGGTGAGGTTGAACAAATA
TCACTGATGAAACCTAGAGGACAAGGACCACATGATGAAGGCTTTCTTGAGTATTTAGAG
GATATTATCGGAACCGAAAAATACGTTGAGAAGATTGATGAATCATTCAAGCAGCTAGAA
TCCCTCAATGAAAGAAGGTCTGGTGTTGTTCAAATGGTTAAGTTAGCTGAGAAAGAAAGA
GATAACTTGGAGGGAGTAAAAAATGACGCAGAAGCCTACATGCTTAAAGAATTATCACTT
CTCAAATGGCAAGAGAAAGCAACAAAATTGGCTTTTGAAGATAATTCAACTCGAATTACG
GAGATGCAGGCGAACATTTCTAGACAAGAAGAGAACCTTAAAAGTGAAAGGGAGAAAATT
AAGGAAAATAGCAAGGCATTGAAGGACCTTGAGTCAAAGCATTCAAAGTTTCTGAAAAGA
CAAGAGGAGCTTGATAACAGTCTAAGGCGCTGCAAGGATGAGTTCAAGGAATTTGAGAGG
CAAGATGTAAAGTATCGAGAAGATTTAAATCACTTGAAGCAGAAGATAAAGAAACTGACT
GATAAAATTGATAAGGATTCTCGTAAAATTGCTGACACAACTAATGAGTGCGAGGAGTCT
GCAAATCTTATTCCAAAATTGGAGAAAGATATTCCAAGCTTGCAACAACTTTTGGTGGGT
GAGGAGAAATTTTTAGAGGAAATAAAGGAGAATTCTAAAGTTGAAACCGAGGCTTTCCGC
AGTGAGCTTTCTGCTGTTCGATCTGAATTAGAGCCTTGGGAAAAGCACTTAATTGAGCAC
AAGGGAAAGCTTGAAGTGGCATCAACTGAAAGTAAACTTTTGAGTGAGAAGCATGAGGCT
GGTCGTGCTGCGTATATTGAAGCACAAGAGCAGATTGTGGAAATACAGAAACGAGTAGAG
ATGAAATCGGCAAGCACAAAAAACATCGCCAATGAGCTTGAGAAGCACAAGCTTAAAGCA
CTTGAGGCTCGAGCTGTTGAAAAGGAATGCCTTCAAGAACAAGAAAGATTGATACCTCTA
GAACAAGCTGCCAGACAAAAGCTTACTGAGCTTTCATCTGTTATGGAATCTGAGAAGAGC
CAGGGATCTGTCCTAAAAGCAATAATGCATGCTAAGGAGGCAAATGTGATAGATGGCATT
TATGGTCGAATGGGTGACTTGGGTGCGATTGATGCAAAGTATGATGTTGCCATATCAACC
GCATGTGCTGGGCTTGAATATATTGTTGTAGAAACTACAGAAGCAGCACAAGCTTGCGTG
GAGCTTCTTCGAAGCAAAACCCTTGGTGTAGCAACTTTCATGATTTTGGAAAAACAAGCT
CATTATTTGCCTAAAATCAAAGAGAGAGTCAGAACGCCAGAAGGAGTCCCACGCCTTTTT
GATTTGGTTAAGGTCCGAGATGAGAGGATGAAACTAGCATTTTTTGCGGCATTAGGAAAT
ACAGTTGTTGCAGAAGATATTGATCAGGCATCACGTATTGCCTATGGTGGGGACAGAGAG
TTTCGCCGTGTTGTAACACTTGAAGGTGCTCTTTTTGAAAAATCTGGAACAATGAGTGGT
GGAGGGGGTAAACCTCGTGGTGGTAAAATGGGCACATCTATCCGTGCTGCTAGTGTTTCA
CCAGAGGCTATATCTGCTGCTGAAATAGAACTTTCACAGATAGCCGAAAACTTGGATAAT
GTACGCCAAAGAATTACTGATGCTGTGAAGTGTTACCAGGCCTCAGAGAAGGCTCTTTCT
CTTGGCGAGATGGAATTAGCCAAATGCAAAAAAGAGATTGACAGCCTGAAGTCCCAATGT
GATGATCTAAAAAAGCAACTGGATTCCTTGAGAAGTGCATCAGAACCTAGTAAGGATGAA
GTTAATAGATTGAAGGAACTCAAGAAAATAATTTCTGCTGAAGAAAAAGAAATGGACAGG
CTTACACAAGGTTCAAAACAGCTGAAAGAGAAGGCTTCAGAACTTCAGAATAAAATAGAG
AATGCAGGTGGCGAGCGATTGAAAAATCAAAAGGCAAAGGTTACTAAAATACAATCTGAT
ATCGATAAAAAGAGCACAGAGATCAACCGTCGTAAGGTTCAGATTGAAACAGGACAGAAA
ATGATTAAAAAACTGACAAAGGGGATTGAGGAATCAAACAAAGAGAAGGAAAGTCTACTT
GCTGAGAAGGAGAAGTTACTTTCCATCTTCAAAGAGGTCGAACAGAAAGCTTTTACTGTT
CAGGAGGACTATAAAAAGATACAGGAGCTCATTGATCAGCACAAAGATGCTCTGAATGGT
GCTAAAAATGAATATGAAAATTTGAAGAAGACTATGGATGAGATGCGGTCATCAGAGGTA
GATGCGGACTACAAGTTACAAGATATGAAGAAGGTTTATAAAGACTTGGAACTCAAAGGG
AAAGGATACAAGAAAAAACTCGATGATTTGCATAGTGCTCTGTCAAAGCATATTGAGCAA
ATTCAAAAAGACTTGGTGGACCCGGAAAAGCTTCAGGCAACTCTAAGTGACGAAACTCTT
GGTCAGACTTGTGATCTTAAGACAGCTCTTGAGACAATTTCACTTCTAGAGGCTCAACTG
AAAGAGATAAACCCAAATCTTGACTCAATTTCTGAGTATCGGAAGAAAGTATCTGTGTAC
AATGAAAGAGTTCAAGAGCTTAATTCTGTTACTCAAGAGCGTGATGATATTAAAAAACAA
TATGATGAGTGGAGAAAGAGAAGGTTGGATGAGTTCATGGAGGGCTTTAATACCATATCT
TTGAAGCTTAAAGAAATGTATCAGATGATCACTCTTGGAGGCGACGCAGAACTGGAATTA
GTGGATTCTCTTGATCCGTTTTCTGAAGGTGTTGTTTTCAGTGTTAGACCTCCAAAGAAA
AGCTGGAAGAATATTGCTAACTTATCAGGTGGTGAAAAGACCCTCAGCTCATTGGCTCTT
GTTTTTGCACTCCACCACTATAAACCCACTCCACTTTATGTGATGGATGAGATTGATGCT
GCTTTGGATTTTAAGAATGTCTCAATCGTGGGGCATTATGTCAAGGACAGAACTAAAGAT
GCACAGTTCATAATCATAAGCCTTAGAAACAATATGTTTGAGCTAGCAGATAGGCTAGTT
GGAATCTACAAAACGGATAACTGCACCAAGAGCATTACTATCAATCCAGGAAGCTTTGTA
GTTTCTCAGAAAGTTGCTTGA