Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003339
CDS Infomation

pacid=37427575 polypeptide=PGSC0003DMP400002372 locus=PGSC0003DMG400001321 ID=PGSC0003DMT400003339.v4.03 annot-version=v4.03
Sequence

ATGACAGCACATTTGAAGGAAATTGCAAAACATATTGAATCTACTCAGGGAGGGCTGTTT
CTTGAAGAACTGAATCGGATATGGGCAGAGCATAACAAGGCACTGCAAATGATTCGAGAT
ATATTGATGTATATGGATAGAACTTTCATTCCCAGTACACATAAAACACCTGTTCATGAG
CTTGGTTTGAATTTATGGAGAGACAACATCATCCACTCTAGCAAAATACACAAAAGGCTT
CAGGACACACTTCTTGAACTAGTTCAGCATGAGAGGACCGGTGAAGTGATAAACAGGGGT
TTGATGAGGAATGTAATACAAATGCTAATGGATTTAGGTTCTTCAGTATACCAAGAAGAC
TTTGAAAAGCCGTTTCTTGATGTCTCGGCTGATTTCTATCGGCTTGAGTCTCAGCAATAC
ATTGAGTGCTGTGATTGTGGGGATTATCTGAAGAAAGCTGAGAAACGTCTTATCGAAGAG
ATTGAAAGAGTGTCCCACTATCTAGATACAAAAAGTGAACCCAAACTTACTAATGTCGTG
GAGAAAGAGATGATTGAAAGCCATATGCACAGGCTGGTTCATATGGAGAACTCGGGATTA
GTGAATATGATCGTAAATGACAAGTACGAAGATTTAGGAAGGATGTACAACTTGTTCCGA
AGAGTGTCAACTGGGCTCGCACTGATTAGAGATGTCATGACTTCTCATATTAGAGAAATT
GGTAAGCAGCTTGTCACTGATCCAGAAAAGTTGAAGGATCCTGTAGACTTTGTGCAGAGG
CTTTTGGATGAGAAGGATAAGCATGATAAGATCATTAGTTCAGCATTTAACAATGACAAA
ACATTCCAGAATGCTCTCAATTCCTCATTTGAGTTCTTCATTAATCTGAATCCACGATCA
CCAGAGTTCATCTCTTTGTTTGTGGATGACAAACTTCGGAAAGGGCTGAAAGGGGTTACT
GAGGAGGATGTAGAGATCATATTAGACAAAGTGATGATGCTCTTCCGCTACCTTCAGGAG
AAAGATGTGTTTGAGAAGTACTACAAGCAGCACTTGGCAAAGAGGCTACTCTCAGGGAAG
ACGGTATCTGATGACGCAGAGAGAAGTTTGATAGTTAAGCTTAAAACAGAATGCGGGTAC
CAGTTCACCTCAAAACTGGAAGGCATGTTTACTGATATGAAGACCTCACAGGATACAATG
CAGGGTTTTCATGCTGCTGCGGGTGCTGATCTTGCAGAGGGTCCTTCACTTACTGTCCAG
GTTCTTACTACTGGGTCCTGGCCAACACAATCTGTTAATACTTGCAATCTTCCTTCGGAA
ATCTTAGGGGTCTGTGATAGGTTCAAGACATACTATCTGGGGACCCATACGGGTAGGAGG
TTGTCATGGCAGACAAATATGGGGACTGCTGATCTGAAAGCTACATTTGGAAAGGGACAG
AAGCATGAGCTTAATGTTTCCACTTATCAGATGTGCATCCTTATGTTGTTTAACAAAGCG
GATCGAATGAGTTACAAAGAAATTGAACAGGCTACAGAAATACCAGCTTCAGACTTAAAG
AGGTGCTTACAATCTCTCGCTTGTGTCAAGGGGAAGAATGTTTTGAGGAAGGAGCCAATG
AGCAAGGATATTGCTGAAGATGATGCCTTTTACTTCAATGATAAATTTTCGAGCAAGTTC
TACAAGGTGAAGATAGGTACTGTTGTTGCACAAAAGGAGTCAGAGCCTGAGAAACAGGAG
ACTAGGCAGAGAGTGGAGGAGGACCGAAAACCTCAGATTGAGGCAGCAATTGTCAGAATC
ATGAAATCTCGGAGGGTGCTAGATCACAACAATATAGTTGCCGAAGTAACAAAGCAGCTA
CAGTCTCGATTCCTGCCAAACCCTGTTGTCATAAAGAAACGAATTGAGTCTTTGATTGAG
CGTGAATTCTTGGAGAGGGATAAAACCGATAGGAAGTTGTATCGTTATCTGGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002372
PEP Infomation

pacid=37427575 transcript=PGSC0003DMT400003339 locus=PGSC0003DMG400001321 ID=PGSC0003DMT400003339.v4.03 annot-version=v4.03
Sequence

MTAHLKEIAKHIESTQGGLFLEELNRIWAEHNKALQMIRDILMYMDRTFIPSTHKTPVHE
LGLNLWRDNIIHSSKIHKRLQDTLLELVQHERTGEVINRGLMRNVIQMLMDLGSSVYQED
FEKPFLDVSADFYRLESQQYIECCDCGDYLKKAEKRLIEEIERVSHYLDTKSEPKLTNVV
EKEMIESHMHRLVHMENSGLVNMIVNDKYEDLGRMYNLFRRVSTGLALIRDVMTSHIREI
GKQLVTDPEKLKDPVDFVQRLLDEKDKHDKIISSAFNNDKTFQNALNSSFEFFINLNPRS
PEFISLFVDDKLRKGLKGVTEEDVEIILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGK
TVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFHAAAGADLAEGPSLTVQ
VLTTGSWPTQSVNTCNLPSEILGVCDRFKTYYLGTHTGRRLSWQTNMGTADLKATFGKGQ
KHELNVSTYQMCILMLFNKADRMSYKEIEQATEIPASDLKRCLQSLACVKGKNVLRKEPM
SKDIAEDDAFYFNDKFSSKFYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRI
MKSRRVLDHNNIVAEVTKQLQSRFLPNPVVIKKRIESLIEREFLERDKTDRKLYRYLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400003339
Transcript Infomation

pacid=37427575 locus=PGSC0003DMG400001321 ID=PGSC0003DMT400003339.v4.03 annot-version=v4.03
Sequence

ATGACAGCACATTTGAAGGAAATTGCAAAACATATTGAATCTACTCAGGGAGGGCTGTTT
CTTGAAGAACTGAATCGGATATGGGCAGAGCATAACAAGGCACTGCAAATGATTCGAGAT
ATATTGATGTATATGGATAGAACTTTCATTCCCAGTACACATAAAACACCTGTTCATGAG
CTTGGTTTGAATTTATGGAGAGACAACATCATCCACTCTAGCAAAATACACAAAAGGCTT
CAGGACACACTTCTTGAACTAGTTCAGCATGAGAGGACCGGTGAAGTGATAAACAGGGGT
TTGATGAGGAATGTAATACAAATGCTAATGGATTTAGGTTCTTCAGTATACCAAGAAGAC
TTTGAAAAGCCGTTTCTTGATGTCTCGGCTGATTTCTATCGGCTTGAGTCTCAGCAATAC
ATTGAGTGCTGTGATTGTGGGGATTATCTGAAGAAAGCTGAGAAACGTCTTATCGAAGAG
ATTGAAAGAGTGTCCCACTATCTAGATACAAAAAGTGAACCCAAACTTACTAATGTCGTG
GAGAAAGAGATGATTGAAAGCCATATGCACAGGCTGGTTCATATGGAGAACTCGGGATTA
GTGAATATGATCGTAAATGACAAGTACGAAGATTTAGGAAGGATGTACAACTTGTTCCGA
AGAGTGTCAACTGGGCTCGCACTGATTAGAGATGTCATGACTTCTCATATTAGAGAAATT
GGTAAGCAGCTTGTCACTGATCCAGAAAAGTTGAAGGATCCTGTAGACTTTGTGCAGAGG
CTTTTGGATGAGAAGGATAAGCATGATAAGATCATTAGTTCAGCATTTAACAATGACAAA
ACATTCCAGAATGCTCTCAATTCCTCATTTGAGTTCTTCATTAATCTGAATCCACGATCA
CCAGAGTTCATCTCTTTGTTTGTGGATGACAAACTTCGGAAAGGGCTGAAAGGGGTTACT
GAGGAGGATGTAGAGATCATATTAGACAAAGTGATGATGCTCTTCCGCTACCTTCAGGAG
AAAGATGTGTTTGAGAAGTACTACAAGCAGCACTTGGCAAAGAGGCTACTCTCAGGGAAG
ACGGTATCTGATGACGCAGAGAGAAGTTTGATAGTTAAGCTTAAAACAGAATGCGGGTAC
CAGTTCACCTCAAAACTGGAAGGCATGTTTACTGATATGAAGACCTCACAGGATACAATG
CAGGGTTTTCATGCTGCTGCGGGTGCTGATCTTGCAGAGGGTCCTTCACTTACTGTCCAG
GTTCTTACTACTGGGTCCTGGCCAACACAATCTGTTAATACTTGCAATCTTCCTTCGGAA
ATCTTAGGGGTCTGTGATAGGTTCAAGACATACTATCTGGGGACCCATACGGGTAGGAGG
TTGTCATGGCAGACAAATATGGGGACTGCTGATCTGAAAGCTACATTTGGAAAGGGACAG
AAGCATGAGCTTAATGTTTCCACTTATCAGATGTGCATCCTTATGTTGTTTAACAAAGCG
GATCGAATGAGTTACAAAGAAATTGAACAGGCTACAGAAATACCAGCTTCAGACTTAAAG
AGGTGCTTACAATCTCTCGCTTGTGTCAAGGGGAAGAATGTTTTGAGGAAGGAGCCAATG
AGCAAGGATATTGCTGAAGATGATGCCTTTTACTTCAATGATAAATTTTCGAGCAAGTTC
TACAAGGTGAAGATAGGTACTGTTGTTGCACAAAAGGAGTCAGAGCCTGAGAAACAGGAG
ACTAGGCAGAGAGTGGAGGAGGACCGAAAACCTCAGATTGAGGCAGCAATTGTCAGAATC
ATGAAATCTCGGAGGGTGCTAGATCACAACAATATAGTTGCCGAAGTAACAAAGCAGCTA
CAGTCTCGATTCCTGCCAAACCCTGTTGTCATAAAGAAACGAATTGAGTCTTTGATTGAG
CGTGAATTCTTGGAGAGGGATAAAACCGATAGGAAGTTGTATCGTTATCTGGCTTGA