Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003323
CDS Infomation

pacid=37424264 polypeptide=PGSC0003DMP400002358 locus=PGSC0003DMG400001315 ID=PGSC0003DMT400003323.v4.03 annot-version=v4.03
Sequence

ATGGGGAAAAAATCTCCTGCCAAGTGGATCAAGGCCGTGCTTTTTGGGAAGAAATCATCC
AAATCTCATTTATCAAAGGATGCTTCGGGTGAGAAAATATCTTCTGCAAAAGCGCCGGTG
GGGGATCTCTCTCTTGATTCACCAAGTTTGGATCTACCAGTTCAGAATTTTGATAATGGT
GGTGACCAGGCTGGATTGGAAAAGGGTACAAGCACTGACTTTGCATGTGAAACCGCCTCA
TTATCCTCTGCAACACATGATATAGAACCGCATGTAAATGGGACAATCTCCACAGATGAT
GCTGAGCTGAAAAGACAAGAGCATGCTGCCACCATAGCACAGGCAGCCTTTAGGGGCTAC
TTGGCTCGTCGGGCTTTTCGAGCTCTCAAAGGCATCATAAGGCTACAAGCCCTTATTCGT
GGGCACTTGGTAAGGAGACAGGCAGTTTCTACTTTACGCTGCATGCAGGCGATTGTCAGG
ATTCAGGCATTAGCTCGTGGCCGAAGGATTAGACTCTTAGATCCTGGGCATCAGCTGCTC
GGAAAGTATAATTTTGAGGAACTTAAGGATCCTGAGCAGAGGCCTGCAAAACTGACAGCT
TATGCATTTCCACGCAAGCTTCTTGTGGCAGTGCCAACAGCCATGCCTTTGAGCCTTCAG
TATGATGAGTGCGAACCTAATTCAGCTTGGCAGTGGCTTGAAAGATGGTCACTATCTCGC
TTTTGGGAACCACTTCCACAACCAAAGAAAGTAGTTGGAGCAAAGTCGCTGAAGAAGCAG
GGTAACAAGCCGAGTGTTGAAACAGAAGCTGTACGACCAAAACGAAGTGTCAAGAAGGTT
CTTACAGCATCAAATGGAGATGCTTATGCCGTTAGTTCCTCTGAACCAGAAAAGGCTAAA
CGCAACCCAAGGAAATTCTCGAATCATCACATAGAGCCAGTGCAGGATCAGCCTCAAAAT
GAACTTGAAAAAGTCAAGCGCAATTTAAGAAAAGTTTCTGCAGCTTTGGCAACATCTTCA
GAGAGGTCTGAAACAGAAATTGAGAAGGCGCAACAGACTCCTAATCTGGCTCAGGCTCAG
GCACAGGCCATAGCATCAAAATCCTCAGCTCCAGATGTTGTTGAACAAATGATGGTTAAT
TCTTATGAGAAAACGAGTGATTCAGTTCCTGAAATCGAGAAATTGGCTGAAAGTGAAGCT
CCTTTACCTGTACCAGTGGATGAGCCAAGTGATGTACTGCACGATCATCCTACCACTGAG
CAGCAGCAGTCGGAGGATGTTAACAACACCGCAAACAGCCCAGTTGTCAATGAGGAACTT
AGCTCGATGGAAGATCAGACTACCAAAGAAAGAATTAGGAGGAGGAAGTCTCTCCCCACT
AAGCAGGACAATTCTGAGAATATTTCACAGAATACACCAAGTGTGCCTAGTTATATGGCT
GCTACTCAATCTGCTAAGGCAAAGCTTAAAGCTCAAGGATCTCCCAAGGTAAGTGATGAT
GGAGCTGAAAATGGGTTTGTTCGGCGTCATTCTCTACCATCCTCTGCCAATGGCAAATTC
AACTCATTGTCACCTCGGATTCAAAAACCAGGGCAAGCAAATGGAAAAGGTGGAAACAAG
ACCAGACCGATGCCCTCCTCGAAAGACGGTAAGAAAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002358
PEP Infomation

pacid=37424264 transcript=PGSC0003DMT400003323 locus=PGSC0003DMG400001315 ID=PGSC0003DMT400003323.v4.03 annot-version=v4.03
Sequence

MGKKSPAKWIKAVLFGKKSSKSHLSKDASGEKISSAKAPVGDLSLDSPSLDLPVQNFDNG
GDQAGLEKGTSTDFACETASLSSATHDIEPHVNGTISTDDAELKRQEHAATIAQAAFRGY
LARRAFRALKGIIRLQALIRGHLVRRQAVSTLRCMQAIVRIQALARGRRIRLLDPGHQLL
GKYNFEELKDPEQRPAKLTAYAFPRKLLVAVPTAMPLSLQYDECEPNSAWQWLERWSLSR
FWEPLPQPKKVVGAKSLKKQGNKPSVETEAVRPKRSVKKVLTASNGDAYAVSSSEPEKAK
RNPRKFSNHHIEPVQDQPQNELEKVKRNLRKVSAALATSSERSETEIEKAQQTPNLAQAQ
AQAIASKSSAPDVVEQMMVNSYEKTSDSVPEIEKLAESEAPLPVPVDEPSDVLHDHPTTE
QQQSEDVNNTANSPVVNEELSSMEDQTTKERIRRRKSLPTKQDNSENISQNTPSVPSYMA
ATQSAKAKLKAQGSPKVSDDGAENGFVRRHSLPSSANGKFNSLSPRIQKPGQANGKGGNK
TRPMPSSKDGKKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400003323
Transcript Infomation

pacid=37424264 locus=PGSC0003DMG400001315 ID=PGSC0003DMT400003323.v4.03 annot-version=v4.03
Sequence

ATGGGGAAAAAATCTCCTGCCAAGTGGATCAAGGCCGTGCTTTTTGGGAAGAAATCATCC
AAATCTCATTTATCAAAGGATGCTTCGGGTGAGAAAATATCTTCTGCAAAAGCGCCGGTG
GGGGATCTCTCTCTTGATTCACCAAGTTTGGATCTACCAGTTCAGAATTTTGATAATGGT
GGTGACCAGGCTGGATTGGAAAAGGGTACAAGCACTGACTTTGCATGTGAAACCGCCTCA
TTATCCTCTGCAACACATGATATAGAACCGCATGTAAATGGGACAATCTCCACAGATGAT
GCTGAGCTGAAAAGACAAGAGCATGCTGCCACCATAGCACAGGCAGCCTTTAGGGGCTAC
TTGGCTCGTCGGGCTTTTCGAGCTCTCAAAGGCATCATAAGGCTACAAGCCCTTATTCGT
GGGCACTTGGTAAGGAGACAGGCAGTTTCTACTTTACGCTGCATGCAGGCGATTGTCAGG
ATTCAGGCATTAGCTCGTGGCCGAAGGATTAGACTCTTAGATCCTGGGCATCAGCTGCTC
GGAAAGTATAATTTTGAGGAACTTAAGGATCCTGAGCAGAGGCCTGCAAAACTGACAGCT
TATGCATTTCCACGCAAGCTTCTTGTGGCAGTGCCAACAGCCATGCCTTTGAGCCTTCAG
TATGATGAGTGCGAACCTAATTCAGCTTGGCAGTGGCTTGAAAGATGGTCACTATCTCGC
TTTTGGGAACCACTTCCACAACCAAAGAAAGTAGTTGGAGCAAAGTCGCTGAAGAAGCAG
GGTAACAAGCCGAGTGTTGAAACAGAAGCTGTACGACCAAAACGAAGTGTCAAGAAGGTT
CTTACAGCATCAAATGGAGATGCTTATGCCGTTAGTTCCTCTGAACCAGAAAAGGCTAAA
CGCAACCCAAGGAAATTCTCGAATCATCACATAGAGCCAGTGCAGGATCAGCCTCAAAAT
GAACTTGAAAAAGTCAAGCGCAATTTAAGAAAAGTTTCTGCAGCTTTGGCAACATCTTCA
GAGAGGTCTGAAACAGAAATTGAGAAGGCGCAACAGACTCCTAATCTGGCTCAGGCTCAG
GCACAGGCCATAGCATCAAAATCCTCAGCTCCAGATGTTGTTGAACAAATGATGGTTAAT
TCTTATGAGAAAACGAGTGATTCAGTTCCTGAAATCGAGAAATTGGCTGAAAGTGAAGCT
CCTTTACCTGTACCAGTGGATGAGCCAAGTGATGTACTGCACGATCATCCTACCACTGAG
CAGCAGCAGTCGGAGGATGTTAACAACACCGCAAACAGCCCAGTTGTCAATGAGGAACTT
AGCTCGATGGAAGATCAGACTACCAAAGAAAGAATTAGGAGGAGGAAGTCTCTCCCCACT
AAGCAGGACAATTCTGAGAATATTTCACAGAATACACCAAGTGTGCCTAGTTATATGGCT
GCTACTCAATCTGCTAAGGCAAAGCTTAAAGCTCAAGGATCTCCCAAGGTAAGTGATGAT
GGAGCTGAAAATGGGTTTGTTCGGCGTCATTCTCTACCATCCTCTGCCAATGGCAAATTC
AACTCATTGTCACCTCGGATTCAAAAACCAGGGCAAGCAAATGGAAAAGGTGGAAACAAG
ACCAGACCGATGCCCTCCTCGAAAGACGGTAAGAAAAAATGA