Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003310
CDS Infomation

pacid=37428558 polypeptide=PGSC0003DMP400002349 locus=PGSC0003DMG400001311 ID=PGSC0003DMT400003310.v4.03 annot-version=v4.03
Sequence

ATGAGAGGAACTAAGCTGGTATATTTGTCTCTGTTACTATTTTCCACATTTTTGGCAATA
AATGGTCACATTGGTGAGTTTGATGAGGTGTGGAGGAGGAGAGCCCAGGAAGCAGATGAA
TGGGCCATAAAGGCTTACAAGCCCGACCCGATCAATGTCACCCTTGCATTTGCTAAGCAA
ACTGGACAGGCCTTAAAGGAAATAAAGGAAGCGAAGCTGGCAATAAATGGAACAAGGAGG
GAGTTAAAAGGAGGCGGGAAAAAATACAATGGGCCTTGCTTAGTCACCAACCCAATTGAT
AGGTGCTGGAGATGCCAACCTAATTGGGCCGACAATCGGAAAAGATTAGCTGATTGTGCA
ATGGGATTTGCAAAAGGGACCACCGGCGGAAAAGCCGGCGAGATCTACGTCGTCACGGAT
TCTTCCGACGACACTAGCGACCCTAAGCCGGGAACCCTCCGTTATGGTGTCATTCAAAAG
GAGCCATTATGGATCATATTTGCTAAAAGCATGACCATTAGGCTACACCAGGAACTCATA
GTGCAAAGCGATAAGACCATTGATGGCCGCGGAGTTAACGTTCACATTGCTAATGGAGCA
GGTTTCATGCTCCAGTACGTGAAGAACGTGATTATCCACGGTCTCCGAATTCACGATATT
GTGGTGGGCAGTGGTGGAATGATCAGAGACGCGATGGACCACATTGGACAACGGACACAG
AGCGACGGAGATGGTATTTCTATATTTGGTTCGTCGAATATATGGGTGGATCATGTGTCA
ATGTGGAGTTGTTATGATGGGCTTGTTGATGCTGTGGAGGGATCCACTGCTGTTACCATA
TCGAATAGCCATTTCACTGATCATAATGAGGTGATGCTTTTTGGTGCAAGTGACAGTTCT
TCAATTGATCAAAGGATGCAAATTACTGTGGCTTATAATCATTTTGGGAAGAGATTGATA
CAGAGAATGCCAAGGTGCAGATGGGGTTTTATTCATGTGGTTAACAATGACTACACACAT
TGGAATATGTATGCTATTGGTGGTAGCCAACATCCCACTATTATTAGTCAAGGTAATCGT
TTCATTGCTCCTCCTGACATGTTCAAGAAAGAGGTAACAAAGAGGGACTATTCCCCAGAA
TCAGTGTGGAAACAATGGTCATGGAGATCACAAGGTGATCTATTCATGAATGGAGCATTC
TTTGTTGAATCTGGAGATCCAGATTGGACCAAGAAACACACTGAGCTTTTTGATGGGATT
GTATCAGCCTCAGGGGATCAAGTCACTTGGATTACAAGATTTTCAGGGGCACTAAATTGC
AAGCCAGGAGAAGCTTGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400002349
PEP Infomation

pacid=37428558 transcript=PGSC0003DMT400003310 locus=PGSC0003DMG400001311 ID=PGSC0003DMT400003310.v4.03 annot-version=v4.03
Sequence

MRGTKLVYLSLLLFSTFLAINGHIGEFDEVWRRRAQEADEWAIKAYKPDPINVTLAFAKQ
TGQALKEIKEAKLAINGTRRELKGGGKKYNGPCLVTNPIDRCWRCQPNWADNRKRLADCA
MGFAKGTTGGKAGEIYVVTDSSDDTSDPKPGTLRYGVIQKEPLWIIFAKSMTIRLHQELI
VQSDKTIDGRGVNVHIANGAGFMLQYVKNVIIHGLRIHDIVVGSGGMIRDAMDHIGQRTQ
SDGDGISIFGSSNIWVDHVSMWSCYDGLVDAVEGSTAVTISNSHFTDHNEVMLFGASDSS
SIDQRMQITVAYNHFGKRLIQRMPRCRWGFIHVVNNDYTHWNMYAIGGSQHPTIISQGNR
FIAPPDMFKKEVTKRDYSPESVWKQWSWRSQGDLFMNGAFFVESGDPDWTKKHTELFDGI
VSASGDQVTWITRFSGALNCKPGEAC*

Transcript Sequence

Transcript ID

PGSC0003DMT400003310
Transcript Infomation

pacid=37428558 locus=PGSC0003DMG400001311 ID=PGSC0003DMT400003310.v4.03 annot-version=v4.03
Sequence

ATGAGAGGAACTAAGCTGGTATATTTGTCTCTGTTACTATTTTCCACATTTTTGGCAATA
AATGGTCACATTGGTGAGTTTGATGAGGTGTGGAGGAGGAGAGCCCAGGAAGCAGATGAA
TGGGCCATAAAGGCTTACAAGCCCGACCCGATCAATGTCACCCTTGCATTTGCTAAGCAA
ACTGGACAGGCCTTAAAGGAAATAAAGGAAGCGAAGCTGGCAATAAATGGAACAAGGAGG
GAGTTAAAAGGAGGCGGGAAAAAATACAATGGGCCTTGCTTAGTCACCAACCCAATTGAT
AGGTGCTGGAGATGCCAACCTAATTGGGCCGACAATCGGAAAAGATTAGCTGATTGTGCA
ATGGGATTTGCAAAAGGGACCACCGGCGGAAAAGCCGGCGAGATCTACGTCGTCACGGAT
TCTTCCGACGACACTAGCGACCCTAAGCCGGGAACCCTCCGTTATGGTGTCATTCAAAAG
GAGCCATTATGGATCATATTTGCTAAAAGCATGACCATTAGGCTACACCAGGAACTCATA
GTGCAAAGCGATAAGACCATTGATGGCCGCGGAGTTAACGTTCACATTGCTAATGGAGCA
GGTTTCATGCTCCAGTACGTGAAGAACGTGATTATCCACGGTCTCCGAATTCACGATATT
GTGGTGGGCAGTGGTGGAATGATCAGAGACGCGATGGACCACATTGGACAACGGACACAG
AGCGACGGAGATGGTATTTCTATATTTGGTTCGTCGAATATATGGGTGGATCATGTGTCA
ATGTGGAGTTGTTATGATGGGCTTGTTGATGCTGTGGAGGGATCCACTGCTGTTACCATA
TCGAATAGCCATTTCACTGATCATAATGAGGTGATGCTTTTTGGTGCAAGTGACAGTTCT
TCAATTGATCAAAGGATGCAAATTACTGTGGCTTATAATCATTTTGGGAAGAGATTGATA
CAGAGAATGCCAAGGTGCAGATGGGGTTTTATTCATGTGGTTAACAATGACTACACACAT
TGGAATATGTATGCTATTGGTGGTAGCCAACATCCCACTATTATTAGTCAAGGTAATCGT
TTCATTGCTCCTCCTGACATGTTCAAGAAAGAGGTAACAAAGAGGGACTATTCCCCAGAA
TCAGTGTGGAAACAATGGTCATGGAGATCACAAGGTGATCTATTCATGAATGGAGCATTC
TTTGTTGAATCTGGAGATCCAGATTGGACCAAGAAACACACTGAGCTTTTTGATGGGATT
GTATCAGCCTCAGGGGATCAAGTCACTTGGATTACAAGATTTTCAGGGGCACTAAATTGC
AAGCCAGGAGAAGCTTGTTAG