Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003290
CDS Infomation

pacid=37426246 polypeptide=PGSC0003DMP400002338 locus=PGSC0003DMG400001307 ID=PGSC0003DMT400003290.v4.03 annot-version=v4.03
Sequence

ATGGAGTTCTTCAACAGAGCTAAAGTTGTTCGGCTCAAAAGTCATCTTGGCAAGTACCTT
GTCGCCGATGATGACGAAAAAACCGTCCGTCAAAGCCGTAACGGGTCATCAAAAAAGGCA
CGTTGGATGGTCGAAATGGTCCAAGGCAATCCTCACCTCATTCATCTCCGGAGTTGCAAT
GACAAATATCTATCGGCATCTGAGGACGCTTTCCTCCTTGGCATGACAGGTAAAAGAGTA
CTCCAAGCATTACCAGGTAGCGCGACGGATGGTTTAATTGAATGGGAGCCAATAAAGGAA
GGATATCAAGTGAAATTAAGGACAAGAGGAGGAAAATTCTTGAGGGCTAATGGAGCAACA
CCTCCATGGAGAAATTCTGTAACTCATGATTTACCTCATAGAACTGCTACACAAGATTGG
GTATTATGGGATGTGGATGTGATTGATATATCTGTACTGGATTCTGAATCCTTACAGAGT
TATCCTTCAACTCTATCGAGCTTCTCTTCTTTTGCAGAGGATGATTTTACAGATTATTCA
AACATTCGTCTCTCTGTTTCTGAAATTCCCAGCTGTCCATCAATTTCATCAGATCGTTCT
TCATGTTCAAGTTCCAGACAGAATGGCATGGAATTTTTCGACAGAGCTGAAGCAGTTAGA
CTTCAGAGCCATCTCGGAAAGTACCTACTGGCGGATGAAGACGAACAAACTGTTCGACAG
AGCAGAAACGGATCATCGCACAGGGCGCGATGGACAGTCGAATTAATTGCCGGAAAAAAC
AATTTAATTCGACTAAAAAGCTGCTATGGGCTGTACCTAACAGCAACTGAGCAGCCATTT
CTTTTGGGAATGACTGGTAAAAAGGTTCTTCAAGCTCTTTCAACAAAGAATATGGATGGG
TCAATTGAATGGGAACCAATTAAAGAAGGATTTCATGTGAAGCTTAGAACTAATGAAGGG
AAATATTTGAGGGCTAATGGAGCTACACCACCATGGAGAAATTCTATAACACATGATGTT
CCTAACAGGACAGCTACTCTAGATTGGGTTATGTGGGGAGTAGAAGTTGTGGATATTACT
ATTTCAGCTACTACTGAATCAGTATCAAGGTGTTTATCGCCAGTGTCAAGTTTTAATTCT
GTGCTCGATGATTATACAACTTCTCCTGATACTGGATCCCCAAATGTCGTAAACTACCAA
TCCAAGAGGTCTATGAACACACCCATGAAAAAGAATTCTGGGATGGAATTCTTCCAGAAA
GCCAAATCGGTTAGGCTAAAAGGCCGCCATGACAAATTCTTATTAGCAGATCCTGATCAA
GAAACCGTGTACCAAGATCGCAATGGAACTTCCCAGAGTGCAAAATGGACAATTGAATTC
CCTGAAGAAGTCGAAAATGTCATCAGGTTGAAGAGTTGCTATGGAAAATATCTAACAGCC
ACAGATGATCAATTCCTTTTTGGTGTCACGGGTAGCAAAGTTGTTCAGAGTTTGCCTAGA
AAGTTAGATTCCTCAATTGAGTGGGAACCAATGAAGGATGGATTCCTAGTGAAGCTTAAA
ACCAGATATGGGAATTATTTACGCGCAAATGGTGGATTACCCCCTTGGCGAAATTCAATT
ACACATGATATACCTCATAGACATCACGATTGGATCTTATGGCAAGTGGATATTGTTGAA
ATACTGCCTGAATCTGAAACTGTTGCACAATCACGATTGGACGATAATTCCAGCTCTTCT
TTTCATTTTACATCCCCTACATATCCTGGGAGTGAGTCAAGAGATGCTTTTGATGCTTCC
ACGGTGAAGTCTGAAGGTCGGTTGATCTATTACCATGTGCCTGGTGAAAATGGATATGCA
AATGATGCAGTGGAAGGGCCATCTTTTCAATTCAAAGGGCATGGGGTAGGGGAGCTGATT
CAAAAGTTGGAGGAAATAACAGGGCTGGATAATATTACTGTCTGTTCGCGAAACAAGTTC
AATGGGAATCTATATCCACTCCGTTTAGCATTGCCTCCAAACAACGCGGATATGAATGTT
GTGGTAGTTCCTGCATCAGCCAAAAATAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400002338
PEP Infomation

pacid=37426246 transcript=PGSC0003DMT400003290 locus=PGSC0003DMG400001307 ID=PGSC0003DMT400003290.v4.03 annot-version=v4.03
Sequence

MEFFNRAKVVRLKSHLGKYLVADDDEKTVRQSRNGSSKKARWMVEMVQGNPHLIHLRSCN
DKYLSASEDAFLLGMTGKRVLQALPGSATDGLIEWEPIKEGYQVKLRTRGGKFLRANGAT
PPWRNSVTHDLPHRTATQDWVLWDVDVIDISVLDSESLQSYPSTLSSFSSFAEDDFTDYS
NIRLSVSEIPSCPSISSDRSSCSSSRQNGMEFFDRAEAVRLQSHLGKYLLADEDEQTVRQ
SRNGSSHRARWTVELIAGKNNLIRLKSCYGLYLTATEQPFLLGMTGKKVLQALSTKNMDG
SIEWEPIKEGFHVKLRTNEGKYLRANGATPPWRNSITHDVPNRTATLDWVMWGVEVVDIT
ISATTESVSRCLSPVSSFNSVLDDYTTSPDTGSPNVVNYQSKRSMNTPMKKNSGMEFFQK
AKSVRLKGRHDKFLLADPDQETVYQDRNGTSQSAKWTIEFPEEVENVIRLKSCYGKYLTA
TDDQFLFGVTGSKVVQSLPRKLDSSIEWEPMKDGFLVKLKTRYGNYLRANGGLPPWRNSI
THDIPHRHHDWILWQVDIVEILPESETVAQSRLDDNSSSSFHFTSPTYPGSESRDAFDAS
TVKSEGRLIYYHVPGENGYANDAVEGPSFQFKGHGVGELIQKLEEITGLDNITVCSRNKF
NGNLYPLRLALPPNNADMNVVVVPASAKNK*

Transcript Sequence

Transcript ID

PGSC0003DMT400003290
Transcript Infomation

pacid=37426246 locus=PGSC0003DMG400001307 ID=PGSC0003DMT400003290.v4.03 annot-version=v4.03
Sequence

ATGGAGTTCTTCAACAGAGCTAAAGTTGTTCGGCTCAAAAGTCATCTTGGCAAGTACCTT
GTCGCCGATGATGACGAAAAAACCGTCCGTCAAAGCCGTAACGGGTCATCAAAAAAGGCA
CGTTGGATGGTCGAAATGGTCCAAGGCAATCCTCACCTCATTCATCTCCGGAGTTGCAAT
GACAAATATCTATCGGCATCTGAGGACGCTTTCCTCCTTGGCATGACAGGTAAAAGAGTA
CTCCAAGCATTACCAGGTAGCGCGACGGATGGTTTAATTGAATGGGAGCCAATAAAGGAA
GGATATCAAGTGAAATTAAGGACAAGAGGAGGAAAATTCTTGAGGGCTAATGGAGCAACA
CCTCCATGGAGAAATTCTGTAACTCATGATTTACCTCATAGAACTGCTACACAAGATTGG
GTATTATGGGATGTGGATGTGATTGATATATCTGTACTGGATTCTGAATCCTTACAGAGT
TATCCTTCAACTCTATCGAGCTTCTCTTCTTTTGCAGAGGATGATTTTACAGATTATTCA
AACATTCGTCTCTCTGTTTCTGAAATTCCCAGCTGTCCATCAATTTCATCAGATCGTTCT
TCATGTTCAAGTTCCAGACAGAATGGCATGGAATTTTTCGACAGAGCTGAAGCAGTTAGA
CTTCAGAGCCATCTCGGAAAGTACCTACTGGCGGATGAAGACGAACAAACTGTTCGACAG
AGCAGAAACGGATCATCGCACAGGGCGCGATGGACAGTCGAATTAATTGCCGGAAAAAAC
AATTTAATTCGACTAAAAAGCTGCTATGGGCTGTACCTAACAGCAACTGAGCAGCCATTT
CTTTTGGGAATGACTGGTAAAAAGGTTCTTCAAGCTCTTTCAACAAAGAATATGGATGGG
TCAATTGAATGGGAACCAATTAAAGAAGGATTTCATGTGAAGCTTAGAACTAATGAAGGG
AAATATTTGAGGGCTAATGGAGCTACACCACCATGGAGAAATTCTATAACACATGATGTT
CCTAACAGGACAGCTACTCTAGATTGGGTTATGTGGGGAGTAGAAGTTGTGGATATTACT
ATTTCAGCTACTACTGAATCAGTATCAAGGTGTTTATCGCCAGTGTCAAGTTTTAATTCT
GTGCTCGATGATTATACAACTTCTCCTGATACTGGATCCCCAAATGTCGTAAACTACCAA
TCCAAGAGGTCTATGAACACACCCATGAAAAAGAATTCTGGGATGGAATTCTTCCAGAAA
GCCAAATCGGTTAGGCTAAAAGGCCGCCATGACAAATTCTTATTAGCAGATCCTGATCAA
GAAACCGTGTACCAAGATCGCAATGGAACTTCCCAGAGTGCAAAATGGACAATTGAATTC
CCTGAAGAAGTCGAAAATGTCATCAGGTTGAAGAGTTGCTATGGAAAATATCTAACAGCC
ACAGATGATCAATTCCTTTTTGGTGTCACGGGTAGCAAAGTTGTTCAGAGTTTGCCTAGA
AAGTTAGATTCCTCAATTGAGTGGGAACCAATGAAGGATGGATTCCTAGTGAAGCTTAAA
ACCAGATATGGGAATTATTTACGCGCAAATGGTGGATTACCCCCTTGGCGAAATTCAATT
ACACATGATATACCTCATAGACATCACGATTGGATCTTATGGCAAGTGGATATTGTTGAA
ATACTGCCTGAATCTGAAACTGTTGCACAATCACGATTGGACGATAATTCCAGCTCTTCT
TTTCATTTTACATCCCCTACATATCCTGGGAGTGAGTCAAGAGATGCTTTTGATGCTTCC
ACGGTGAAGTCTGAAGGTCGGTTGATCTATTACCATGTGCCTGGTGAAAATGGATATGCA
AATGATGCAGTGGAAGGGCCATCTTTTCAATTCAAAGGGCATGGGGTAGGGGAGCTGATT
CAAAAGTTGGAGGAAATAACAGGGCTGGATAATATTACTGTCTGTTCGCGAAACAAGTTC
AATGGGAATCTATATCCACTCCGTTTAGCATTGCCTCCAAACAACGCGGATATGAATGTT
GTGGTAGTTCCTGCATCAGCCAAAAATAAGTAG