Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003285
CDS Infomation

pacid=37428576 polypeptide=PGSC0003DMP400002335 locus=PGSC0003DMG400001305 ID=PGSC0003DMT400003285.v4.03 annot-version=v4.03
Sequence

ATGGGAGCATCATTGACTGAATTAGGGTCCAAGCTTGCTGGACTAATGTTCATATGGGGC
ACAATTCAACAACTTTTCCCTCAAATACTCTGCAAACGAATCGAATCCTTCTGGACTCGA
CTCGAATATTACTTCTATCCTTATGTTCAAATTACGATTAATGAACTCACCAATGGAAAA
AGTAACGAAATTTACAGACATGTTGACAGTTATTTGGGTACTAAGTCTGTCGACACTAGT
GCTAAGTATCTCAAAGCTGAAAAATCCGAAAACAGCAAGTCTTTCGCTGTTATCTTGGAC
GAAGGAGAAGAAATCATTGATGAATTCGAAGGCGCTATATTCTGCTGGCGCTCTCACAAT
GAAACGTTCGATGATAATTCTCAGGGGAGTAAAAAAACCCAGCCTACTGAAAAGAAAAGT
TACACAATTACATTCAATAAGCAACATCGAGAGATTGTCACGGGAAAATACTTGAAACAT
GTGATTGAAGAAGGCAGGGCAATTGAGTTCAAGAATAAGAAACAGAGGATTTATTGTAAC
GACAGTATGCCTACTTGGTGGTTGCGTTTAAACTCAATGTGGAAGCACATCAATTTTGAG
CACCCTGCAACTTTTGATACTCTGGCTATGGATCCTAAGAAGAAAGCGGAAATAATCAAC
GATCTCATTGCTTTCAGCAAGGGGAAGGATTATTATTCCAAAGTTGGAAAGGCGTGGAAG
CGTGGTTATCTTCTTTATGGTCCACCAGGAACTGGAAAATCAACTATGATTGCAGCAATT
TCAAATTACTTGAACTATGATATTTATGATCTTGAGCTAACCACTGTTAAGGATAACTTA
GAACTTAAGAAGTTGCTCATGGAAACAACAAGCAAGTCTATTATTGTCATTGAAGACATT
GATTGTTCCGTTGATCTCACTGGCAAGAGAAACAAGGCAAAAAAGAATAAGAAGAAGGAC
GACTCAGATTCCGACTCAGATTCGGACTCTGATTCCAACTCAGATTCGGATTCAGACTCT
GAAGGCAAAAAAAAACTTACACTTTCAGGGTTGTTGAATTTCATTGATGGCATTTGGTCA
GCTTGTGGTGAAGAGAGAATTATTATATTTACGACTAATCATGTTGACAAACTTGATCCA
GCTTTGATACGTAGAGGACGAATGGATATGCACATTGAGATGTCGTATTGCAGATACGAA
GCATTCAAAGTGTTGGCTAAGAATTACTTGGGCATTGATACACATCCTCTGTTTCAAGAG
ATTGAACCTTTACTAGAGGAAGTAAACATGAGTCCTTGTGATGTCGCGGAGAGCTTGATA
CGCAAGAATACTTCTGGAGGGATTGAGATTTGCTTGAATAACTTGATTCTGGCTTTGAAA
GAGGCCAAGGAAAAGGCAATAGAAGAAGCCAGGGAGAAGGAAAAACAAGATTCGGAACGA
GTCAAGGAAGAAAATCCCAAGAAAAATAAAAAGTTGTCAACAAAATTTTATGGCCGTTTT
AAAAAGCTTTTCAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002335
PEP Infomation

pacid=37428576 transcript=PGSC0003DMT400003285 locus=PGSC0003DMG400001305 ID=PGSC0003DMT400003285.v4.03 annot-version=v4.03
Sequence

MGASLTELGSKLAGLMFIWGTIQQLFPQILCKRIESFWTRLEYYFYPYVQITINELTNGK
SNEIYRHVDSYLGTKSVDTSAKYLKAEKSENSKSFAVILDEGEEIIDEFEGAIFCWRSHN
ETFDDNSQGSKKTQPTEKKSYTITFNKQHREIVTGKYLKHVIEEGRAIEFKNKKQRIYCN
DSMPTWWLRLNSMWKHINFEHPATFDTLAMDPKKKAEIINDLIAFSKGKDYYSKVGKAWK
RGYLLYGPPGTGKSTMIAAISNYLNYDIYDLELTTVKDNLELKKLLMETTSKSIIVIEDI
DCSVDLTGKRNKAKKNKKKDDSDSDSDSDSDSNSDSDSDSEGKKKLTLSGLLNFIDGIWS
ACGEERIIIFTTNHVDKLDPALIRRGRMDMHIEMSYCRYEAFKVLAKNYLGIDTHPLFQE
IEPLLEEVNMSPCDVAESLIRKNTSGGIEICLNNLILALKEAKEKAIEEAREKEKQDSER
VKEENPKKNKKLSTKFYGRFKKLFR*

Transcript Sequence

Transcript ID

PGSC0003DMT400003285
Transcript Infomation

pacid=37428576 locus=PGSC0003DMG400001305 ID=PGSC0003DMT400003285.v4.03 annot-version=v4.03
Sequence

ATGGGAGCATCATTGACTGAATTAGGGTCCAAGCTTGCTGGACTAATGTTCATATGGGGC
ACAATTCAACAACTTTTCCCTCAAATACTCTGCAAACGAATCGAATCCTTCTGGACTCGA
CTCGAATATTACTTCTATCCTTATGTTCAAATTACGATTAATGAACTCACCAATGGAAAA
AGTAACGAAATTTACAGACATGTTGACAGTTATTTGGGTACTAAGTCTGTCGACACTAGT
GCTAAGTATCTCAAAGCTGAAAAATCCGAAAACAGCAAGTCTTTCGCTGTTATCTTGGAC
GAAGGAGAAGAAATCATTGATGAATTCGAAGGCGCTATATTCTGCTGGCGCTCTCACAAT
GAAACGTTCGATGATAATTCTCAGGGGAGTAAAAAAACCCAGCCTACTGAAAAGAAAAGT
TACACAATTACATTCAATAAGCAACATCGAGAGATTGTCACGGGAAAATACTTGAAACAT
GTGATTGAAGAAGGCAGGGCAATTGAGTTCAAGAATAAGAAACAGAGGATTTATTGTAAC
GACAGTATGCCTACTTGGTGGTTGCGTTTAAACTCAATGTGGAAGCACATCAATTTTGAG
CACCCTGCAACTTTTGATACTCTGGCTATGGATCCTAAGAAGAAAGCGGAAATAATCAAC
GATCTCATTGCTTTCAGCAAGGGGAAGGATTATTATTCCAAAGTTGGAAAGGCGTGGAAG
CGTGGTTATCTTCTTTATGGTCCACCAGGAACTGGAAAATCAACTATGATTGCAGCAATT
TCAAATTACTTGAACTATGATATTTATGATCTTGAGCTAACCACTGTTAAGGATAACTTA
GAACTTAAGAAGTTGCTCATGGAAACAACAAGCAAGTCTATTATTGTCATTGAAGACATT
GATTGTTCCGTTGATCTCACTGGCAAGAGAAACAAGGCAAAAAAGAATAAGAAGAAGGAC
GACTCAGATTCCGACTCAGATTCGGACTCTGATTCCAACTCAGATTCGGATTCAGACTCT
GAAGGCAAAAAAAAACTTACACTTTCAGGGTTGTTGAATTTCATTGATGGCATTTGGTCA
GCTTGTGGTGAAGAGAGAATTATTATATTTACGACTAATCATGTTGACAAACTTGATCCA
GCTTTGATACGTAGAGGACGAATGGATATGCACATTGAGATGTCGTATTGCAGATACGAA
GCATTCAAAGTGTTGGCTAAGAATTACTTGGGCATTGATACACATCCTCTGTTTCAAGAG
ATTGAACCTTTACTAGAGGAAGTAAACATGAGTCCTTGTGATGTCGCGGAGAGCTTGATA
CGCAAGAATACTTCTGGAGGGATTGAGATTTGCTTGAATAACTTGATTCTGGCTTTGAAA
GAGGCCAAGGAAAAGGCAATAGAAGAAGCCAGGGAGAAGGAAAAACAAGATTCGGAACGA
GTCAAGGAAGAAAATCCCAAGAAAAATAAAAAGTTGTCAACAAAATTTTATGGCCGTTTT
AAAAAGCTTTTCAGATGA