Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003261
CDS Infomation

pacid=37429911 polypeptide=PGSC0003DMP400002318 locus=PGSC0003DMG400001291 ID=PGSC0003DMT400003261.v4.03 annot-version=v4.03
Sequence

ATGGCGGTTTCTTCTAACAAATCTCCTTCTCCACTTTCTGCAAGACCCGTTCCTCCTCCT
CATTCAAGAACCTCTGAAAACACTAGAAGAAGTTTCACCGGCAACCCTTTTTCTCGACCT
TCAGTTCTTTCAACCCATAGAGGATTTTATAACCCTGTTACTCCTGCAAATAGCCCTGCT
GATTCGGCGAGAAGGGTGTCTAATCCAGGGAAAGAGGGTTTATCATGGGGTAATGAAGAG
AAGGAGAATGAATCTAAAGCAACGAAACTGAAATCACCGGCAAAGGGTTCAAAGAATTTC
ATGTCTCCGACTATTTCAGCTTCTTCCAAGATTGCTCAATCCCCTAAAAAGAAAATCTTG
GTGGAAAGAAACGATCCTGTTAGGACTTCAATCACCTTCTCTGACGGTAGAGCTACATTC
TTTTCTTCAAATTCTGAAGAACATAATCAAAACTCTGAAAAATCTTTTGAGAATGTTATG
GAGCCTAAAGAGATTGTTCATGTTGAAGGTCTTCCTCCAGTTACCAAAGCGCCGAAAAAG
GTAACATTTTCCGAGGCACCTTCAAATTGCAACAATGCATCTGAATCCCTTTCTGATACT
GTAACCATGGATTCTGACATTTGCAATGATGAACCACTGGTTTCTCCTGCAATAGCCCCA
CTTGATGCTGATCCCTCTTTACCTCCATATGACCCTAAAACCAATTACCTATCTCCAAGG
CCTCAGTTTCTTCACTACAAACCCAACCCAATGATTGAAGTTTTACTCAATAAGGGAAAA
GGAATGGATGCAGGAGAAGCAAAGAAGCTAGATGACATCTTCTTGTCGGAGTTACTGTCT
GAAAACTTGTCAGACATAGATGGCAGTGAAAGTTCTCTAACTGAAGATTCACTGAAAGAA
TCTGATGGTTCTTCTTCAGAAGAGATGATAATTGAAGCAACAGTTGATCAAGAAGAGGAA
GAGGGGCCTAAAGTTTCTGTTGCTGCAATACCTGTTGCTGAGGAAATTGCTGAACCTGCA
CTACCTGTTGCTGAGGACATTTCTGAAGCAAAAATGAGAGCAAAACCAAGGTCTTTAACA
ATATCAAAGTTCTTTTCTCTGCTGTTGGTACTAGTAATTGCCTTCTTATCAATATCAGTT
ACTGATTCTCCTATACTTGCTACTCCCGGGACTGTAGACTTAAGTTTCTCTAATCTCAGC
ATACCATCAGATATTCCAGTCTTGGCTAAGGCTAATAGTTACTTTAAGCAATATTCAGGT
GAAGCCATTTCTTATTTCTCAAAGTTGATTAATGACCTCGGTAGGGTAGATTACCCACAG
CCTTTAAAATTTGCGAACTTGACTGATCTAGGAGAGAGTAGCAGCATATATGGATATTTG
AAAGGTAGTACTAGTAGTGAGGAATTGGATATAGAGATTGAACCAATTGAATTGGAAGAG
GATGATGAAGAGTCTGAAACTGAGCCTGACGAGGAAGAGTTTCAAATGAAAGCTGATTTA
GATGATGGTGATGAATTGGAAATTGAAGAAGCGCATGAGTTGGAGATTGAAGAAGCTTCC
ACAATTCAATTAGCTGAAGTAAATGAGTCTGATAGCTTAGAAAAGGATTTAGAACAAGGT
CAGCATGACTTGGTGGAGACTGAAGAAGTCTCTGTTGTCATAGCTGAGGAGAATGAAGCC
AATATTTCAGAAAGGGATTTAGATCAAGGGCTTACAACTTCTAATGTTCAGTTTGAGTTG
GCTGAATCCGTATACATTGTTGATAATGCTATCAGTACTGATGCTGCATTTGAGTCGGTG
AATGACAATCCTGAAACCTTGGTGAAAGATGATTCTGCTGTCGAAGATGTCCAAACTTTG
GAAATGATGCAGTCTCCAATTGATAGAAATGATGGAGATAATGCTGGAGCATATCAGATA
CTGGGAATTTCCTCACTTGCACTGAGTTTGCTTGCTGCTACAGTTTTCTATGTGAAGAGA
AGTGATAAGACTATGCATCCAGTAGTAGTTCGTGCTGATCAAGTCTCAAGTAAGAAATTT
GCAACACACCATATTGTCAAGGAGAAGCATTCCTCTCAAAATTGGCCCACAGAAGTCGAT
GTCGCAGGAGAGTCTTGTCCCTCAGAAATGAGCAGCTTTCAGATAAGTTCATCTTATAGC
AAGAAAGACCCCAAATCAGAGAATGATGAGGCTCAAAGCATTGAGAAGAAACCGAGGAAG
AGTAACAAAAGAGAGTCCTTGACCGCATCTGAGTTCTCAATGGGTTCACCTTCTTATGGA
AGTTTCACTACATATGAGAGGATTCCTATCAAGCATGCAAGTGGAGGAGAAGAAGTCATC
ACCCCTGTAAGGCGCTCGAGCAGAATTAGAAGCCATGTCATTTCTCCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002318
PEP Infomation

pacid=37429911 transcript=PGSC0003DMT400003261 locus=PGSC0003DMG400001291 ID=PGSC0003DMT400003261.v4.03 annot-version=v4.03
Sequence

MAVSSNKSPSPLSARPVPPPHSRTSENTRRSFTGNPFSRPSVLSTHRGFYNPVTPANSPA
DSARRVSNPGKEGLSWGNEEKENESKATKLKSPAKGSKNFMSPTISASSKIAQSPKKKIL
VERNDPVRTSITFSDGRATFFSSNSEEHNQNSEKSFENVMEPKEIVHVEGLPPVTKAPKK
VTFSEAPSNCNNASESLSDTVTMDSDICNDEPLVSPAIAPLDADPSLPPYDPKTNYLSPR
PQFLHYKPNPMIEVLLNKGKGMDAGEAKKLDDIFLSELLSENLSDIDGSESSLTEDSLKE
SDGSSSEEMIIEATVDQEEEEGPKVSVAAIPVAEEIAEPALPVAEDISEAKMRAKPRSLT
ISKFFSLLLVLVIAFLSISVTDSPILATPGTVDLSFSNLSIPSDIPVLAKANSYFKQYSG
EAISYFSKLINDLGRVDYPQPLKFANLTDLGESSSIYGYLKGSTSSEELDIEIEPIELEE
DDEESETEPDEEEFQMKADLDDGDELEIEEAHELEIEEASTIQLAEVNESDSLEKDLEQG
QHDLVETEEVSVVIAEENEANISERDLDQGLTTSNVQFELAESVYIVDNAISTDAAFESV
NDNPETLVKDDSAVEDVQTLEMMQSPIDRNDGDNAGAYQILGISSLALSLLAATVFYVKR
SDKTMHPVVVRADQVSSKKFATHHIVKEKHSSQNWPTEVDVAGESCPSEMSSFQISSSYS
KKDPKSENDEAQSIEKKPRKSNKRESLTASEFSMGSPSYGSFTTYERIPIKHASGGEEVI
TPVRRSSRIRSHVISP*

Transcript Sequence

Transcript ID

PGSC0003DMT400003261
Transcript Infomation

pacid=37429911 locus=PGSC0003DMG400001291 ID=PGSC0003DMT400003261.v4.03 annot-version=v4.03
Sequence

ATGGCGGTTTCTTCTAACAAATCTCCTTCTCCACTTTCTGCAAGACCCGTTCCTCCTCCT
CATTCAAGAACCTCTGAAAACACTAGAAGAAGTTTCACCGGCAACCCTTTTTCTCGACCT
TCAGTTCTTTCAACCCATAGAGGATTTTATAACCCTGTTACTCCTGCAAATAGCCCTGCT
GATTCGGCGAGAAGGGTGTCTAATCCAGGGAAAGAGGGTTTATCATGGGGTAATGAAGAG
AAGGAGAATGAATCTAAAGCAACGAAACTGAAATCACCGGCAAAGGGTTCAAAGAATTTC
ATGTCTCCGACTATTTCAGCTTCTTCCAAGATTGCTCAATCCCCTAAAAAGAAAATCTTG
GTGGAAAGAAACGATCCTGTTAGGACTTCAATCACCTTCTCTGACGGTAGAGCTACATTC
TTTTCTTCAAATTCTGAAGAACATAATCAAAACTCTGAAAAATCTTTTGAGAATGTTATG
GAGCCTAAAGAGATTGTTCATGTTGAAGGTCTTCCTCCAGTTACCAAAGCGCCGAAAAAG
GTAACATTTTCCGAGGCACCTTCAAATTGCAACAATGCATCTGAATCCCTTTCTGATACT
GTAACCATGGATTCTGACATTTGCAATGATGAACCACTGGTTTCTCCTGCAATAGCCCCA
CTTGATGCTGATCCCTCTTTACCTCCATATGACCCTAAAACCAATTACCTATCTCCAAGG
CCTCAGTTTCTTCACTACAAACCCAACCCAATGATTGAAGTTTTACTCAATAAGGGAAAA
GGAATGGATGCAGGAGAAGCAAAGAAGCTAGATGACATCTTCTTGTCGGAGTTACTGTCT
GAAAACTTGTCAGACATAGATGGCAGTGAAAGTTCTCTAACTGAAGATTCACTGAAAGAA
TCTGATGGTTCTTCTTCAGAAGAGATGATAATTGAAGCAACAGTTGATCAAGAAGAGGAA
GAGGGGCCTAAAGTTTCTGTTGCTGCAATACCTGTTGCTGAGGAAATTGCTGAACCTGCA
CTACCTGTTGCTGAGGACATTTCTGAAGCAAAAATGAGAGCAAAACCAAGGTCTTTAACA
ATATCAAAGTTCTTTTCTCTGCTGTTGGTACTAGTAATTGCCTTCTTATCAATATCAGTT
ACTGATTCTCCTATACTTGCTACTCCCGGGACTGTAGACTTAAGTTTCTCTAATCTCAGC
ATACCATCAGATATTCCAGTCTTGGCTAAGGCTAATAGTTACTTTAAGCAATATTCAGGT
GAAGCCATTTCTTATTTCTCAAAGTTGATTAATGACCTCGGTAGGGTAGATTACCCACAG
CCTTTAAAATTTGCGAACTTGACTGATCTAGGAGAGAGTAGCAGCATATATGGATATTTG
AAAGGTAGTACTAGTAGTGAGGAATTGGATATAGAGATTGAACCAATTGAATTGGAAGAG
GATGATGAAGAGTCTGAAACTGAGCCTGACGAGGAAGAGTTTCAAATGAAAGCTGATTTA
GATGATGGTGATGAATTGGAAATTGAAGAAGCGCATGAGTTGGAGATTGAAGAAGCTTCC
ACAATTCAATTAGCTGAAGTAAATGAGTCTGATAGCTTAGAAAAGGATTTAGAACAAGGT
CAGCATGACTTGGTGGAGACTGAAGAAGTCTCTGTTGTCATAGCTGAGGAGAATGAAGCC
AATATTTCAGAAAGGGATTTAGATCAAGGGCTTACAACTTCTAATGTTCAGTTTGAGTTG
GCTGAATCCGTATACATTGTTGATAATGCTATCAGTACTGATGCTGCATTTGAGTCGGTG
AATGACAATCCTGAAACCTTGGTGAAAGATGATTCTGCTGTCGAAGATGTCCAAACTTTG
GAAATGATGCAGTCTCCAATTGATAGAAATGATGGAGATAATGCTGGAGCATATCAGATA
CTGGGAATTTCCTCACTTGCACTGAGTTTGCTTGCTGCTACAGTTTTCTATGTGAAGAGA
AGTGATAAGACTATGCATCCAGTAGTAGTTCGTGCTGATCAAGTCTCAAGTAAGAAATTT
GCAACACACCATATTGTCAAGGAGAAGCATTCCTCTCAAAATTGGCCCACAGAAGTCGAT
GTCGCAGGAGAGTCTTGTCCCTCAGAAATGAGCAGCTTTCAGATAAGTTCATCTTATAGC
AAGAAAGACCCCAAATCAGAGAATGATGAGGCTCAAAGCATTGAGAAGAAACCGAGGAAG
AGTAACAAAAGAGAGTCCTTGACCGCATCTGAGTTCTCAATGGGTTCACCTTCTTATGGA
AGTTTCACTACATATGAGAGGATTCCTATCAAGCATGCAAGTGGAGGAGAAGAAGTCATC
ACCCCTGTAAGGCGCTCGAGCAGAATTAGAAGCCATGTCATTTCTCCATGA