Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003157
CDS Infomation

pacid=37430259 polypeptide=PGSC0003DMP400002266 locus=PGSC0003DMG402001248 ID=PGSC0003DMT400003157.v4.03 annot-version=v4.03
Sequence

ATGGGGTCCAAAAATATCAAGCTTCCAAAAATAAACTTTTCTCATGAAGATTTAAAGCCA
GACACACTTGTATGGAATCAAGTGAAAAGCCAAGTCTACAAAGCACTAGTAGAATATGGT
TGTTTTGAAGCTTTCTTTGATAAAATTCCAATAAACCTTCAAAAATCTATTTTTGAAGTC
TCACAAGAGATTTTTGATCTCCCTTTACAAACCAAACTTAAAAACATTTCAACCGAACCC
TTCTATGGCTATGTGGGACAATACCATCCTTCAATTCCACTATTTGAAAGCATGGGCATT
ATTGATTCCAACATCCTTCAGAAAGTTGAAAAATACACTCAACTTTTATGGCCTCAAGGA
AATCCTTCTTTTTGTAAAACTATCCAGTCATATTCAGAGCAACTATCAAAGTTAGACCAG
ACAATAAGAAGAATGATTGTGGAGAGCTTAGGTGTTGAAAAGTACATGGATGAGCATATG
AATTCGACCAACTATCGTCTTCGATTGATAAAGTATAAAGAACCTCAAAGCAATGAGACT
AAAATAGGACTACATGCTCACACAGATAAGAACATTGTTACTATACTATACCAAAATCAG
GTGAATGGTCTTGAAATTTTGACCAAAGATGGACAGTGGATCAATGTTGATCCTACACCT
GACAATTTCACTATCATGATTGGAGACTCTCTACATGCATGGACAAATGGTCGGATGCAT
GCACCATTTCATAGAGTGATGGTGAGAGGAAACGAAGCAAGGTATTCAATTGGTTTGTTT
TCAATACCTAAGGCTGGATGCATAATAAAGACACCGAAAGAGTTGGTAGATGAAGATCAT
CCTTTACTCTTTACGCCCTTTGATTATCATGAATTCCTTTCTTTCGGCTACACTCAAGAA
GACATGAAATGTGATTTTACTTTGAAGGCCTATTCTGGAGTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002266
PEP Infomation

pacid=37430259 transcript=PGSC0003DMT400003157 locus=PGSC0003DMG402001248 ID=PGSC0003DMT400003157.v4.03 annot-version=v4.03
Sequence

MGSKNIKLPKINFSHEDLKPDTLVWNQVKSQVYKALVEYGCFEAFFDKIPINLQKSIFEV
SQEIFDLPLQTKLKNISTEPFYGYVGQYHPSIPLFESMGIIDSNILQKVEKYTQLLWPQG
NPSFCKTIQSYSEQLSKLDQTIRRMIVESLGVEKYMDEHMNSTNYRLRLIKYKEPQSNET
KIGLHAHTDKNIVTILYQNQVNGLEILTKDGQWINVDPTPDNFTIMIGDSLHAWTNGRMH
APFHRVMVRGNEARYSIGLFSIPKAGCIIKTPKELVDEDHPLLFTPFDYHEFLSFGYTQE
DMKCDFTLKAYSGV*

Transcript Sequence

Transcript ID

PGSC0003DMT400003157
Transcript Infomation

pacid=37430259 locus=PGSC0003DMG402001248 ID=PGSC0003DMT400003157.v4.03 annot-version=v4.03
Sequence

ATGGGGTCCAAAAATATCAAGCTTCCAAAAATAAACTTTTCTCATGAAGATTTAAAGCCA
GACACACTTGTATGGAATCAAGTGAAAAGCCAAGTCTACAAAGCACTAGTAGAATATGGT
TGTTTTGAAGCTTTCTTTGATAAAATTCCAATAAACCTTCAAAAATCTATTTTTGAAGTC
TCACAAGAGATTTTTGATCTCCCTTTACAAACCAAACTTAAAAACATTTCAACCGAACCC
TTCTATGGCTATGTGGGACAATACCATCCTTCAATTCCACTATTTGAAAGCATGGGCATT
ATTGATTCCAACATCCTTCAGAAAGTTGAAAAATACACTCAACTTTTATGGCCTCAAGGA
AATCCTTCTTTTTGTAAAACTATCCAGTCATATTCAGAGCAACTATCAAAGTTAGACCAG
ACAATAAGAAGAATGATTGTGGAGAGCTTAGGTGTTGAAAAGTACATGGATGAGCATATG
AATTCGACCAACTATCGTCTTCGATTGATAAAGTATAAAGAACCTCAAAGCAATGAGACT
AAAATAGGACTACATGCTCACACAGATAAGAACATTGTTACTATACTATACCAAAATCAG
GTGAATGGTCTTGAAATTTTGACCAAAGATGGACAGTGGATCAATGTTGATCCTACACCT
GACAATTTCACTATCATGATTGGAGACTCTCTACATGCATGGACAAATGGTCGGATGCAT
GCACCATTTCATAGAGTGATGGTGAGAGGAAACGAAGCAAGGTATTCAATTGGTTTGTTT
TCAATACCTAAGGCTGGATGCATAATAAAGACACCGAAAGAGTTGGTAGATGAAGATCAT
CCTTTACTCTTTACGCCCTTTGATTATCATGAATTCCTTTCTTTCGGCTACACTCAAGAA
GACATGAAATGTGATTTTACTTTGAAGGCCTATTCTGGAGTCTGA