Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003101
CDS Infomation

pacid=37440220 polypeptide=PGSC0003DMP400002234 locus=PGSC0003DMG400001233 ID=PGSC0003DMT400003101.v4.03 annot-version=v4.03
Sequence

ATGGCTTGTCTAACACAGCAATTCGTTGGGTTGAAGTGCCCACCAATTTCGACAACAAGG
CTTGTGAATCCGAGTAATTATCATCATCAGAGTAAGCAGAAGCCAAAAATTGTAGTACAA
GCTGCAGCAGTGGTTGCAAATGCACAAACAAGAGAAAGACTAAAACTTAAAGAGATGTTT
GAGGATGCCTATGAGAGATGCCGCACTACACCTATGGAAGGTGTTGCCTTTACTGTTGAT
GATTTTCATTCTGCCCTTGAAAAATATGATTTTGACTCCGAAGTTGGTACTAAGGTCAAA
GGAACGGTTTTTTCTGTAGATGCAAACGGAGCTCTAGTTGACATTACTGCAAAATCATCT
GCATACTTGCCTTTACGAGAAGCTTCACTTCACACCATCAGACATGTAGAGGAAGCCGGA
ATATTTCCTGGTTTGCGTGAGGAGTTTGTGGTAGTTGGAGAAAATGAAGCTGATGATAGT
TTGGTTTTGAGCTTGCGATCAATTCAGTATGACCTTGCATGGGAGAGATGCAGGCAGCTT
CAAGCTGAAGATGTTGTCATCAAAGGCAAGGTGGTTGGTGCAAATAAAGGTGGAGTGGTC
GCTCTGGTGGAGGGCCTTCGTGGTTTTGTTCCATTCTCCCAGATATCAACGAAATCAACT
GCGGAGGAGCTTTTGGAAAAGGAGCTTCCTCTGAAGTTTGTTGAGGTTGATGAAGAGCAA
TCCAGACTTGTTCTCAGCAATCGTAAGGCCATGGCTGATAGTCAGGCACAATTGGGCATA
GGCTCAGTTGTTCTTGGAACTGTTCAGAGCTTGAAACCATATGGTGCCTTCATTGACATT
GGTGGGATCAATGGCCTTCTTCATGTGAGCCAGATTAGTCATGATCGTGTCTCAGATATT
GCAACAGTCCTCCAGCCTGGTGACACACTCAAGGTCATGATATTGAGCCATGACCGTGAG
AGAGGTCGAGTGAGCCTTTCTACAAAGAAGCTAGAGCCTACACCTGGTGACATGATTCGC
AATCCAAAGCTTGTCTTTGAGAAGGCTGAAGAGATGGCTCAGACATTCAGGCAGAGAATT
GCCCAAGCTGAAGCCATGGCCCGTGCAGATATGCTGAGGTTCCAGCCTGAGAGTGGATTG
ACCCTCAACTCTGACGGGATTTTAGGTCCGCTGACCTCTGAACTACCCGAGGATGGACTG
GACTTGAGTGAGATTCCGCCGGCTGATGATTTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400002234
PEP Infomation

pacid=37440220 transcript=PGSC0003DMT400003101 locus=PGSC0003DMG400001233 ID=PGSC0003DMT400003101.v4.03 annot-version=v4.03
Sequence

MACLTQQFVGLKCPPISTTRLVNPSNYHHQSKQKPKIVVQAAAVVANAQTRERLKLKEMF
EDAYERCRTTPMEGVAFTVDDFHSALEKYDFDSEVGTKVKGTVFSVDANGALVDITAKSS
AYLPLREASLHTIRHVEEAGIFPGLREEFVVVGENEADDSLVLSLRSIQYDLAWERCRQL
QAEDVVIKGKVVGANKGGVVALVEGLRGFVPFSQISTKSTAEELLEKELPLKFVEVDEEQ
SRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFIDIGGINGLLHVSQISHDRVSDI
ATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI
AQAEAMARADMLRFQPESGLTLNSDGILGPLTSELPEDGLDLSEIPPADDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400003101
Transcript Infomation

pacid=37440220 locus=PGSC0003DMG400001233 ID=PGSC0003DMT400003101.v4.03 annot-version=v4.03
Sequence

ATGGCTTGTCTAACACAGCAATTCGTTGGGTTGAAGTGCCCACCAATTTCGACAACAAGG
CTTGTGAATCCGAGTAATTATCATCATCAGAGTAAGCAGAAGCCAAAAATTGTAGTACAA
GCTGCAGCAGTGGTTGCAAATGCACAAACAAGAGAAAGACTAAAACTTAAAGAGATGTTT
GAGGATGCCTATGAGAGATGCCGCACTACACCTATGGAAGGTGTTGCCTTTACTGTTGAT
GATTTTCATTCTGCCCTTGAAAAATATGATTTTGACTCCGAAGTTGGTACTAAGGTCAAA
GGAACGGTTTTTTCTGTAGATGCAAACGGAGCTCTAGTTGACATTACTGCAAAATCATCT
GCATACTTGCCTTTACGAGAAGCTTCACTTCACACCATCAGACATGTAGAGGAAGCCGGA
ATATTTCCTGGTTTGCGTGAGGAGTTTGTGGTAGTTGGAGAAAATGAAGCTGATGATAGT
TTGGTTTTGAGCTTGCGATCAATTCAGTATGACCTTGCATGGGAGAGATGCAGGCAGCTT
CAAGCTGAAGATGTTGTCATCAAAGGCAAGGTGGTTGGTGCAAATAAAGGTGGAGTGGTC
GCTCTGGTGGAGGGCCTTCGTGGTTTTGTTCCATTCTCCCAGATATCAACGAAATCAACT
GCGGAGGAGCTTTTGGAAAAGGAGCTTCCTCTGAAGTTTGTTGAGGTTGATGAAGAGCAA
TCCAGACTTGTTCTCAGCAATCGTAAGGCCATGGCTGATAGTCAGGCACAATTGGGCATA
GGCTCAGTTGTTCTTGGAACTGTTCAGAGCTTGAAACCATATGGTGCCTTCATTGACATT
GGTGGGATCAATGGCCTTCTTCATGTGAGCCAGATTAGTCATGATCGTGTCTCAGATATT
GCAACAGTCCTCCAGCCTGGTGACACACTCAAGGTCATGATATTGAGCCATGACCGTGAG
AGAGGTCGAGTGAGCCTTTCTACAAAGAAGCTAGAGCCTACACCTGGTGACATGATTCGC
AATCCAAAGCTTGTCTTTGAGAAGGCTGAAGAGATGGCTCAGACATTCAGGCAGAGAATT
GCCCAAGCTGAAGCCATGGCCCGTGCAGATATGCTGAGGTTCCAGCCTGAGAGTGGATTG
ACCCTCAACTCTGACGGGATTTTAGGTCCGCTGACCTCTGAACTACCCGAGGATGGACTG
GACTTGAGTGAGATTCCGCCGGCTGATGATTTATGA