Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003016
CDS Infomation

pacid=37428772 polypeptide=PGSC0003DMP400002179 locus=PGSC0003DMG400001193 ID=PGSC0003DMT400003016.v4.03 annot-version=v4.03
Sequence

ATGGCCTCTCTTAATCCATGGGGAAAGCTTGACGAACTAGACAATGAGAGGCTCATGGCT
CGTCGTAAGACGAGGAAGAGAATCATAATTATTGCCATATCATCCATTGTTCTTGTGTCC
ATCGTTATCGGGGCAGTGGTTGGTGGTGTTTCTCACAACAAAAACAAATCTTCCCAACAA
AATGATAATGTCTCGTCGATGACCTCAACCATTAGTGCTGTATGCAATCTAACCCTCTAT
CCCGACTCATGTATCTCCAGCCTTTCCCCATATGCTGCAAAAGGCAATGCTCTCAAACCT
CAAGATATTTACAAGATGTCTGTTCTAGTTGCCCTCAACGAGCTCTCTGGTGCCTCCGAT
AACTTCTTAAAGAGTGATACATTCAAAAACATCAATGATCCAGCAGCTGCTAAAGCTATC
CAGAGTTGTCACGAGCTTCTATCCCTTGCGTTTGATCATCTGAATGACACGTTGTCCGTT
GCTGAAACCTCTTTACTCGATGCCTTTGATGATCTAAAGACATGGTTGAGTTCTGCAGGG
ACTTATCAGCAGACCTGTATTGATAGTTTTGAAAATGTCACATCAAATAGTGCCATACGC
AAAGCTGCAGGACAGAATTTGAACAACTCCACCCGGTACACCAGTAACAGCTTGGCACTT
ATAAGCTCGTTAGAAAATTCCATTACCAGCTTAGGTGCTATCGGAAAGAGGAGACGTTTG
ATGGGATATGGAGATGATGATGATGATGAGTACCCGAGCTGGTTGTCGTCATCAAATGAC
AGGAAACTGCTGCAGAAATCATCAGAAACAAAGATAAAGGTGAATGTAGTAGTGGCTAAA
GATGGTTCAGGGAAGTACAAGAGCATTAAGGCTGCACTAAAAGCTGCACCAGAGAAGAGC
AAGAAGAGATTTGTGATCTATGTGAAAAAGGGTGTTTACAAAGAGAATGTTAGGGTTGAG
AAGACTAAATGGAACATTATGATCATTGGTGATGGAAAAGACGCTACCATCGTTTCTGGT
AACCGTAACTTTATTGATGGAACACCTACATTCCAAAGTGCCACCTTCGCTGTGTTTGGA
AAGGGATTTGTGGCTCGTGATATTGGATTTGTAAACACAGCTGGTGCAGCAAAGCATCAA
GCAGTTGCATTAATGTCAACAGCAGATGAATCAGTGTTCTACCGCTGCAGAATGGACGCG
TTCCAAGACACTCTTTATGCTCATTCCAACAGACAATTCTACAAAGAATGTGATATCTAT
GGGACAGTGGATTTCATCTTTGGTAACTCAGCAGTTGTACTCCAAAACTGCAACATTCTT
CCAAGAATACCAATGAGTGGGCAACAGAACACCATCACAGCTCAAGGAAAAGTTGATCCA
AATCAAAACACTGGAATTTCTATCCAAAACTGTAGCGTTATGCCGTGGGGAAACCTTACT
GGGATCAATACATTTTTAGGAAGGCCATGGAAGAATTACTCAACAACTGTTTTCATGGAA
TCAAACTTGGGAGGTTTCATTCATCCAAATGGATGGATGCCATGGGTTGGAACCACAGCT
CCAAGTACCATATTTTATGCTGAGTATAACAATACTGGAGCAGGGGCAAATACAAAAAAC
AGAGTTAATTGGGAAGGCTTGAAATTGGGACTTACAAGTAAAATAGCAAGCAAGTTCACA
GTAAAGCCTTTCATTCAGGGAAACAAATGGCTTCCTGCAGCTGGTGTTCCATTTATGGCT
GGTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002179
PEP Infomation

pacid=37428772 transcript=PGSC0003DMT400003016 locus=PGSC0003DMG400001193 ID=PGSC0003DMT400003016.v4.03 annot-version=v4.03
Sequence

MASLNPWGKLDELDNERLMARRKTRKRIIIIAISSIVLVSIVIGAVVGGVSHNKNKSSQQ
NDNVSSMTSTISAVCNLTLYPDSCISSLSPYAAKGNALKPQDIYKMSVLVALNELSGASD
NFLKSDTFKNINDPAAAKAIQSCHELLSLAFDHLNDTLSVAETSLLDAFDDLKTWLSSAG
TYQQTCIDSFENVTSNSAIRKAAGQNLNNSTRYTSNSLALISSLENSITSLGAIGKRRRL
MGYGDDDDDEYPSWLSSSNDRKLLQKSSETKIKVNVVVAKDGSGKYKSIKAALKAAPEKS
KKRFVIYVKKGVYKENVRVEKTKWNIMIIGDGKDATIVSGNRNFIDGTPTFQSATFAVFG
KGFVARDIGFVNTAGAAKHQAVALMSTADESVFYRCRMDAFQDTLYAHSNRQFYKECDIY
GTVDFIFGNSAVVLQNCNILPRIPMSGQQNTITAQGKVDPNQNTGISIQNCSVMPWGNLT
GINTFLGRPWKNYSTTVFMESNLGGFIHPNGWMPWVGTTAPSTIFYAEYNNTGAGANTKN
RVNWEGLKLGLTSKIASKFTVKPFIQGNKWLPAAGVPFMAGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400003016
Transcript Infomation

pacid=37428772 locus=PGSC0003DMG400001193 ID=PGSC0003DMT400003016.v4.03 annot-version=v4.03
Sequence

ATGGCCTCTCTTAATCCATGGGGAAAGCTTGACGAACTAGACAATGAGAGGCTCATGGCT
CGTCGTAAGACGAGGAAGAGAATCATAATTATTGCCATATCATCCATTGTTCTTGTGTCC
ATCGTTATCGGGGCAGTGGTTGGTGGTGTTTCTCACAACAAAAACAAATCTTCCCAACAA
AATGATAATGTCTCGTCGATGACCTCAACCATTAGTGCTGTATGCAATCTAACCCTCTAT
CCCGACTCATGTATCTCCAGCCTTTCCCCATATGCTGCAAAAGGCAATGCTCTCAAACCT
CAAGATATTTACAAGATGTCTGTTCTAGTTGCCCTCAACGAGCTCTCTGGTGCCTCCGAT
AACTTCTTAAAGAGTGATACATTCAAAAACATCAATGATCCAGCAGCTGCTAAAGCTATC
CAGAGTTGTCACGAGCTTCTATCCCTTGCGTTTGATCATCTGAATGACACGTTGTCCGTT
GCTGAAACCTCTTTACTCGATGCCTTTGATGATCTAAAGACATGGTTGAGTTCTGCAGGG
ACTTATCAGCAGACCTGTATTGATAGTTTTGAAAATGTCACATCAAATAGTGCCATACGC
AAAGCTGCAGGACAGAATTTGAACAACTCCACCCGGTACACCAGTAACAGCTTGGCACTT
ATAAGCTCGTTAGAAAATTCCATTACCAGCTTAGGTGCTATCGGAAAGAGGAGACGTTTG
ATGGGATATGGAGATGATGATGATGATGAGTACCCGAGCTGGTTGTCGTCATCAAATGAC
AGGAAACTGCTGCAGAAATCATCAGAAACAAAGATAAAGGTGAATGTAGTAGTGGCTAAA
GATGGTTCAGGGAAGTACAAGAGCATTAAGGCTGCACTAAAAGCTGCACCAGAGAAGAGC
AAGAAGAGATTTGTGATCTATGTGAAAAAGGGTGTTTACAAAGAGAATGTTAGGGTTGAG
AAGACTAAATGGAACATTATGATCATTGGTGATGGAAAAGACGCTACCATCGTTTCTGGT
AACCGTAACTTTATTGATGGAACACCTACATTCCAAAGTGCCACCTTCGCTGTGTTTGGA
AAGGGATTTGTGGCTCGTGATATTGGATTTGTAAACACAGCTGGTGCAGCAAAGCATCAA
GCAGTTGCATTAATGTCAACAGCAGATGAATCAGTGTTCTACCGCTGCAGAATGGACGCG
TTCCAAGACACTCTTTATGCTCATTCCAACAGACAATTCTACAAAGAATGTGATATCTAT
GGGACAGTGGATTTCATCTTTGGTAACTCAGCAGTTGTACTCCAAAACTGCAACATTCTT
CCAAGAATACCAATGAGTGGGCAACAGAACACCATCACAGCTCAAGGAAAAGTTGATCCA
AATCAAAACACTGGAATTTCTATCCAAAACTGTAGCGTTATGCCGTGGGGAAACCTTACT
GGGATCAATACATTTTTAGGAAGGCCATGGAAGAATTACTCAACAACTGTTTTCATGGAA
TCAAACTTGGGAGGTTTCATTCATCCAAATGGATGGATGCCATGGGTTGGAACCACAGCT
CCAAGTACCATATTTTATGCTGAGTATAACAATACTGGAGCAGGGGCAAATACAAAAAAC
AGAGTTAATTGGGAAGGCTTGAAATTGGGACTTACAAGTAAAATAGCAAGCAAGTTCACA
GTAAAGCCTTTCATTCAGGGAAACAAATGGCTTCCTGCAGCTGGTGTTCCATTTATGGCT
GGTCTTTGA