Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003012
CDS Infomation

pacid=37436677 polypeptide=PGSC0003DMP400002175 locus=PGSC0003DMG400001190 ID=PGSC0003DMT400003012.v4.03 annot-version=v4.03
Sequence

ATGGCGGCAAAACCAGACGATTCCAAAAAGCGAAAGCATGCACCAGCAGCCGGAGGTAAA
TCAGCTCCGAAGAAACTGAAATCATCAACGGACAAGGTTCTGAAGAAACCCCATAAATCG
ACAAAGCAGCTGGGAGATAAGAAGCAACAACCCAAGCCTCATGTCCCAGTTGAATCCAAG
CGAGAGCGTCGTATACAGGCAAAGGAGTTAGCTGAAGCAAGGAAGAAGAAGAGGAAGAAG
CATTACACATTGGAGCAAGAGCTAGCATCACTATGGGAGAAGATGAGAACTCGAAATATT
GCGAAAGAAGAAAGATCGAGATTGGTGAGTGATGCTTTGAAGAAAATGAAAGGGAAGATC
CCTGAAATAGCAAGCTCCCATGTTTCTTCTCGTGTTCTTCAGACTTGTGTGAAACATTGT
ACACAAGATGAAAGGAATGCTGTGTTTGTGGAGATTCGACCTCATTTTATCACTCTTGCT
ACCAATACCTATGCAGTTCATCTGGTGACAAAGATGCTTGATAATGCATCCAAAGAGCAG
CAGGCACAATTTATTTCTGCTCTTCATGGGCATGTTTCTACTCTTCTTAGGCATATGGTT
GGTTCACTTGTTGTTGAACATGCTTATCAGTTGGGAAATGCAGCTCAAAAACAAACTCTT
CTGATGGAGCTGTATTCCCCAGAGCTTCAGTTGTTCAAAGATTTGATCTCAGCGAAGGAA
GCAAGGCTAGTTGACGTTATATCCAACCTACAGCTTCAAAAGGGTTCAGTTATACGACAC
ATGACCTCTGTACTTCAGCCTATTATGGAGAAAGGGATACTGGACCACTCAATTATACAC
AGGGCACTTGTGGAGTACTTAACTATTGCTGATAAGACTTCTGCTGCAGAAATAATCCAG
CAGTTGTCAAGTCCAGACCTTGTTCGGATGATTCACACAAAGGATGGATCCAAGATTGGG
ATATTCTGCATCAAACATGGGAGCGCAAAGGAGCGGAAGAAGATCATCAAAGGGATGAAA
GACAAGGTTGGAAAGGTAGCACGTGATAAATGTGGGGCTTTGGTGCTTGTCTCCATCCTT
TCAATTGTCGATGACACAAAACTTCTATCAAAGGTCATCATTCGTGAGCTTGAAGGAATT
CTGAAGGAGCTTCTTTCAGATCAGAATGGTAGGCGCCCATTGTTGCAATTACTGCATCCA
AATAGCTCGCGCCATTTCAGCCCTGATGAGCTCGCAGCCCTTGGTTCATCTGTTCCTTCG
CTTGTCACCAAGAGCCCATCAGAAGTAAATGAAACAGAAACTTCAGGGCTTGGTGAAGCT
GGTAAAGAAGATGCTGATGTCACCGAGAGTTCACTAGTGAATGAAGGAGGAAAGAAGGAT
CCTCTTACAAGGCGGCAAGAATTATTGGTCCATAGTGGGCTAGCTGAGAAACTCATTGAT
GCATGTTGTGAGATGGCTGAGGAATTGCTAAGATCAAACTTCGGTAAAGATGTCATATAT
GAGGTTGCCATGGGAGGTGCTGACAGCATCCTTAGTCCAACTTTAGATGGAAAGTTGGAA
ACCTTACATGGTGTTATAGCATCTCTGGCAGCACATCCTAAAATGGAGGGGTCAGATGAA
CAACATCTCTTTGAACACTTCCATTCTAGCAGGACCATCAGAAAACTGATCTTGGACTCC
CCTTCTTTTGCTTGCACTTTGTATGAAAAAGCGCTGAAAGGAAAATGTTCAATTTGGGCT
CAAGGCCACAGTGCGAAAGTAATTAGTGCATTGTTGGAAACTTCAAGTGCTATGGTACAC
AAGCTTGTGAAGAAGGAAGTGCAACCATTGGTAGATGATGGTATCCTCAAATTAGCCAAA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400002175
PEP Infomation

pacid=37436677 transcript=PGSC0003DMT400003012 locus=PGSC0003DMG400001190 ID=PGSC0003DMT400003012.v4.03 annot-version=v4.03
Sequence

MAAKPDDSKKRKHAPAAGGKSAPKKLKSSTDKVLKKPHKSTKQLGDKKQQPKPHVPVESK
RERRIQAKELAEARKKKRKKHYTLEQELASLWEKMRTRNIAKEERSRLVSDALKKMKGKI
PEIASSHVSSRVLQTCVKHCTQDERNAVFVEIRPHFITLATNTYAVHLVTKMLDNASKEQ
QAQFISALHGHVSTLLRHMVGSLVVEHAYQLGNAAQKQTLLMELYSPELQLFKDLISAKE
ARLVDVISNLQLQKGSVIRHMTSVLQPIMEKGILDHSIIHRALVEYLTIADKTSAAEIIQ
QLSSPDLVRMIHTKDGSKIGIFCIKHGSAKERKKIIKGMKDKVGKVARDKCGALVLVSIL
SIVDDTKLLSKVIIRELEGILKELLSDQNGRRPLLQLLHPNSSRHFSPDELAALGSSVPS
LVTKSPSEVNETETSGLGEAGKEDADVTESSLVNEGGKKDPLTRRQELLVHSGLAEKLID
ACCEMAEELLRSNFGKDVIYEVAMGGADSILSPTLDGKLETLHGVIASLAAHPKMEGSDE
QHLFEHFHSSRTIRKLILDSPSFACTLYEKALKGKCSIWAQGHSAKVISALLETSSAMVH
KLVKKEVQPLVDDGILKLAK*

Transcript Sequence

Transcript ID

PGSC0003DMT400003012
Transcript Infomation

pacid=37436677 locus=PGSC0003DMG400001190 ID=PGSC0003DMT400003012.v4.03 annot-version=v4.03
Sequence

ATGGCGGCAAAACCAGACGATTCCAAAAAGCGAAAGCATGCACCAGCAGCCGGAGGTAAA
TCAGCTCCGAAGAAACTGAAATCATCAACGGACAAGGTTCTGAAGAAACCCCATAAATCG
ACAAAGCAGCTGGGAGATAAGAAGCAACAACCCAAGCCTCATGTCCCAGTTGAATCCAAG
CGAGAGCGTCGTATACAGGCAAAGGAGTTAGCTGAAGCAAGGAAGAAGAAGAGGAAGAAG
CATTACACATTGGAGCAAGAGCTAGCATCACTATGGGAGAAGATGAGAACTCGAAATATT
GCGAAAGAAGAAAGATCGAGATTGGTGAGTGATGCTTTGAAGAAAATGAAAGGGAAGATC
CCTGAAATAGCAAGCTCCCATGTTTCTTCTCGTGTTCTTCAGACTTGTGTGAAACATTGT
ACACAAGATGAAAGGAATGCTGTGTTTGTGGAGATTCGACCTCATTTTATCACTCTTGCT
ACCAATACCTATGCAGTTCATCTGGTGACAAAGATGCTTGATAATGCATCCAAAGAGCAG
CAGGCACAATTTATTTCTGCTCTTCATGGGCATGTTTCTACTCTTCTTAGGCATATGGTT
GGTTCACTTGTTGTTGAACATGCTTATCAGTTGGGAAATGCAGCTCAAAAACAAACTCTT
CTGATGGAGCTGTATTCCCCAGAGCTTCAGTTGTTCAAAGATTTGATCTCAGCGAAGGAA
GCAAGGCTAGTTGACGTTATATCCAACCTACAGCTTCAAAAGGGTTCAGTTATACGACAC
ATGACCTCTGTACTTCAGCCTATTATGGAGAAAGGGATACTGGACCACTCAATTATACAC
AGGGCACTTGTGGAGTACTTAACTATTGCTGATAAGACTTCTGCTGCAGAAATAATCCAG
CAGTTGTCAAGTCCAGACCTTGTTCGGATGATTCACACAAAGGATGGATCCAAGATTGGG
ATATTCTGCATCAAACATGGGAGCGCAAAGGAGCGGAAGAAGATCATCAAAGGGATGAAA
GACAAGGTTGGAAAGGTAGCACGTGATAAATGTGGGGCTTTGGTGCTTGTCTCCATCCTT
TCAATTGTCGATGACACAAAACTTCTATCAAAGGTCATCATTCGTGAGCTTGAAGGAATT
CTGAAGGAGCTTCTTTCAGATCAGAATGGTAGGCGCCCATTGTTGCAATTACTGCATCCA
AATAGCTCGCGCCATTTCAGCCCTGATGAGCTCGCAGCCCTTGGTTCATCTGTTCCTTCG
CTTGTCACCAAGAGCCCATCAGAAGTAAATGAAACAGAAACTTCAGGGCTTGGTGAAGCT
GGTAAAGAAGATGCTGATGTCACCGAGAGTTCACTAGTGAATGAAGGAGGAAAGAAGGAT
CCTCTTACAAGGCGGCAAGAATTATTGGTCCATAGTGGGCTAGCTGAGAAACTCATTGAT
GCATGTTGTGAGATGGCTGAGGAATTGCTAAGATCAAACTTCGGTAAAGATGTCATATAT
GAGGTTGCCATGGGAGGTGCTGACAGCATCCTTAGTCCAACTTTAGATGGAAAGTTGGAA
ACCTTACATGGTGTTATAGCATCTCTGGCAGCACATCCTAAAATGGAGGGGTCAGATGAA
CAACATCTCTTTGAACACTTCCATTCTAGCAGGACCATCAGAAAACTGATCTTGGACTCC
CCTTCTTTTGCTTGCACTTTGTATGAAAAAGCGCTGAAAGGAAAATGTTCAATTTGGGCT
CAAGGCCACAGTGCGAAAGTAATTAGTGCATTGTTGGAAACTTCAAGTGCTATGGTACAC
AAGCTTGTGAAGAAGGAAGTGCAACCATTGGTAGATGATGGTATCCTCAAATTAGCCAAA
TGA