Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400003006
CDS Infomation

pacid=37425788 polypeptide=PGSC0003DMP400002170 locus=PGSC0003DMG400001185 ID=PGSC0003DMT400003006.v4.03 annot-version=v4.03
Sequence

ATGGTAGTTCCTCTTGTCTCCTTGTTTTACAACTTTTTCCTCTTTCTCATACTTTCGTCC
TCCAACGTAACTGCTCAACCATCTAGCACAGACACAGACTTTTCATGCTCGTTTAACTCT
TCCTTTTCTTGTGATACTTTTATTTCATATCGTGCCCGTCCACCAAACTATTTAGATGTC
GGAAGTATATCTGATCTTCTTGAAGTGAGTCGTTTAAGTATAGCTACGGCCACAGGTCTA
GCCTCAGAGGATACCGAGCTATTCCCTGACCAGCTTTTACTTGCACCCGTTAAATGCTAC
TGCAATAGTTCTCATTATTTCTCCAATGTCACCTATCAGATCAAGAAAGGCGACAACTTT
TATTCAGTTTCAATAGGAGCTTTTGAGAACCTTACTAATTATCACGTGGTGCAAGATATG
AATCCAACACTAGATCCAACCAACTTGACAATTGGCGCAGAAGCTGTTTTTTCTTTGTTT
TGTAAATGCCCCACACATTCTGATCTCGAAAAGGGACTTCAGTACCTGGTCACTTATGTT
TGGCAGCCTTGGGATGATGTGTTGCCTGTAAGCAATATGTTTGGAGCATCTGCAGCTGAC
ATTCTGGCTGCCAACAATTACAGAAATTTCACTGCTGCAATATATTCTCCTGTCTTGATA
CCAATAAAACTTCCTATTATTCTGCAATCTTACCCCTCTTCTGCAAGCAGTAGAAAATCC
AAACATGGATGGATAGTAATTACTGTTTTAAGTATTATGGGGTTGCTTGCAGTTTTTTCA
TTTTGCTTGATGGTATACATGCGTCATCTAGACGAGAAGAGGAGGGCTAACTTAGCCCAT
AACTCTTCTACTCTTGAAACTTCTGAGCTCTTTCATACCAAGAAAGCCTCAGAAGGTGAA
ATTACGGACCATAAGAACATTCAAGATAAGCTTCTTCCTGGAGTTTCTAGCTACATTGGA
AAGCCAATAATATATGACCTGAAGATCATCATGGAGGCAACTGTCGACCTCAGTGAGAGA
TACAGGATAGGAGGATCAGTGTACAAGGTTACAATGAACGACCAAGTTGTAGCAGTCAAG
AAAACAAAACAAGCCTCGGAGGAAATGACAATACTTCAAAAACTACATCACGCAAATCTA
GTGAAACTAATGGGCGTTTCATCAGACGATCGTGGGAATTCCTTTGTAGTTTATGAATAT
GCTGAAAATGGCTCACTGGATCAATGGTTGTTTCCCGGATTATCATCATCTTCTTCTGCC
TCTGTCTTAGTGGCATCACTTGGTTGGAGTCGAAGATTACACATAGCCTTGGATGTTGCA
AATGCTCTGCAATACCTGCATGAACATACTCAACCTAGTATAGTTCACGGGGACATCCGA
ACGTGTAGCATACTTCTTGATTCAAGGTTTAAAGCCAAAATTGCAGGTTTCTCTACAGCC
AGACATGCCACCAACTCAATGATCCTGAAAGTTGATGTGTTTGCTTTTGGGATTGTGCTG
TTGGAGTTGCTTTCAGGGAAGAAAGCAATGGAATCAAAAGATTATAATGATGAGACTCTG
ATCATCTGCAAAGAAATTAGTGGAATCTTGGAAGTTGAAGAGAACAGAAAGGAGAAGTTT
AGAAAATGGATGGATCCAAAGTTGAGCTTTTACCCTATTGATGATGCTCTAAACTTGGCT
GCCTTGGCGACAGCATGCACATCGAAGCAATCAGCAGAGAGGCCTAAGATGACAGATATT
GTCTTCAACCTCTGTTTTCTTGCTCAATCATCTTTTGAAATGTATGGACCATCTTGGACT
TCAGGTGAAGCTGAGGAGATTGTCCAGATTGTTAGTCCAGTAATAGCACGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400002170
PEP Infomation

pacid=37425788 transcript=PGSC0003DMT400003006 locus=PGSC0003DMG400001185 ID=PGSC0003DMT400003006.v4.03 annot-version=v4.03
Sequence

MVVPLVSLFYNFFLFLILSSSNVTAQPSSTDTDFSCSFNSSFSCDTFISYRARPPNYLDV
GSISDLLEVSRLSIATATGLASEDTELFPDQLLLAPVKCYCNSSHYFSNVTYQIKKGDNF
YSVSIGAFENLTNYHVVQDMNPTLDPTNLTIGAEAVFSLFCKCPTHSDLEKGLQYLVTYV
WQPWDDVLPVSNMFGASAADILAANNYRNFTAAIYSPVLIPIKLPIILQSYPSSASSRKS
KHGWIVITVLSIMGLLAVFSFCLMVYMRHLDEKRRANLAHNSSTLETSELFHTKKASEGE
ITDHKNIQDKLLPGVSSYIGKPIIYDLKIIMEATVDLSERYRIGGSVYKVTMNDQVVAVK
KTKQASEEMTILQKLHHANLVKLMGVSSDDRGNSFVVYEYAENGSLDQWLFPGLSSSSSA
SVLVASLGWSRRLHIALDVANALQYLHEHTQPSIVHGDIRTCSILLDSRFKAKIAGFSTA
RHATNSMILKVDVFAFGIVLLELLSGKKAMESKDYNDETLIICKEISGILEVEENRKEKF
RKWMDPKLSFYPIDDALNLAALATACTSKQSAERPKMTDIVFNLCFLAQSSFEMYGPSWT
SGEAEEIVQIVSPVIAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400003006
Transcript Infomation

pacid=37425788 locus=PGSC0003DMG400001185 ID=PGSC0003DMT400003006.v4.03 annot-version=v4.03
Sequence

ATGGTAGTTCCTCTTGTCTCCTTGTTTTACAACTTTTTCCTCTTTCTCATACTTTCGTCC
TCCAACGTAACTGCTCAACCATCTAGCACAGACACAGACTTTTCATGCTCGTTTAACTCT
TCCTTTTCTTGTGATACTTTTATTTCATATCGTGCCCGTCCACCAAACTATTTAGATGTC
GGAAGTATATCTGATCTTCTTGAAGTGAGTCGTTTAAGTATAGCTACGGCCACAGGTCTA
GCCTCAGAGGATACCGAGCTATTCCCTGACCAGCTTTTACTTGCACCCGTTAAATGCTAC
TGCAATAGTTCTCATTATTTCTCCAATGTCACCTATCAGATCAAGAAAGGCGACAACTTT
TATTCAGTTTCAATAGGAGCTTTTGAGAACCTTACTAATTATCACGTGGTGCAAGATATG
AATCCAACACTAGATCCAACCAACTTGACAATTGGCGCAGAAGCTGTTTTTTCTTTGTTT
TGTAAATGCCCCACACATTCTGATCTCGAAAAGGGACTTCAGTACCTGGTCACTTATGTT
TGGCAGCCTTGGGATGATGTGTTGCCTGTAAGCAATATGTTTGGAGCATCTGCAGCTGAC
ATTCTGGCTGCCAACAATTACAGAAATTTCACTGCTGCAATATATTCTCCTGTCTTGATA
CCAATAAAACTTCCTATTATTCTGCAATCTTACCCCTCTTCTGCAAGCAGTAGAAAATCC
AAACATGGATGGATAGTAATTACTGTTTTAAGTATTATGGGGTTGCTTGCAGTTTTTTCA
TTTTGCTTGATGGTATACATGCGTCATCTAGACGAGAAGAGGAGGGCTAACTTAGCCCAT
AACTCTTCTACTCTTGAAACTTCTGAGCTCTTTCATACCAAGAAAGCCTCAGAAGGTGAA
ATTACGGACCATAAGAACATTCAAGATAAGCTTCTTCCTGGAGTTTCTAGCTACATTGGA
AAGCCAATAATATATGACCTGAAGATCATCATGGAGGCAACTGTCGACCTCAGTGAGAGA
TACAGGATAGGAGGATCAGTGTACAAGGTTACAATGAACGACCAAGTTGTAGCAGTCAAG
AAAACAAAACAAGCCTCGGAGGAAATGACAATACTTCAAAAACTACATCACGCAAATCTA
GTGAAACTAATGGGCGTTTCATCAGACGATCGTGGGAATTCCTTTGTAGTTTATGAATAT
GCTGAAAATGGCTCACTGGATCAATGGTTGTTTCCCGGATTATCATCATCTTCTTCTGCC
TCTGTCTTAGTGGCATCACTTGGTTGGAGTCGAAGATTACACATAGCCTTGGATGTTGCA
AATGCTCTGCAATACCTGCATGAACATACTCAACCTAGTATAGTTCACGGGGACATCCGA
ACGTGTAGCATACTTCTTGATTCAAGGTTTAAAGCCAAAATTGCAGGTTTCTCTACAGCC
AGACATGCCACCAACTCAATGATCCTGAAAGTTGATGTGTTTGCTTTTGGGATTGTGCTG
TTGGAGTTGCTTTCAGGGAAGAAAGCAATGGAATCAAAAGATTATAATGATGAGACTCTG
ATCATCTGCAAAGAAATTAGTGGAATCTTGGAAGTTGAAGAGAACAGAAAGGAGAAGTTT
AGAAAATGGATGGATCCAAAGTTGAGCTTTTACCCTATTGATGATGCTCTAAACTTGGCT
GCCTTGGCGACAGCATGCACATCGAAGCAATCAGCAGAGAGGCCTAAGATGACAGATATT
GTCTTCAACCTCTGTTTTCTTGCTCAATCATCTTTTGAAATGTATGGACCATCTTGGACT
TCAGGTGAAGCTGAGGAGATTGTCCAGATTGTTAGTCCAGTAATAGCACGTTGA