Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002923
CDS Infomation

pacid=37464730 polypeptide=PGSC0003DMP400002116 locus=PGSC0003DMG400001144 ID=PGSC0003DMT400002923.v4.03 annot-version=v4.03
Sequence

ATGGAGATTTCTTTTTCTTCAGTATTTATAGCGTTAGCATGGCTACTAGCATTGGCTATT
ATTTGTAAAGTTATAAACCATATTGTATGCCCCAAAAGAAATGTTCCACCAGGTCCAAGG
CCATGGCCAATTATTGGAAATTTGAACCTTATTGGTTCACTCCCACATGAGTCTTTGCAC
ACTCTTTCACAAAAATATGGAGATTTAATGCTCCTAAAGTTCGGTTCCAAGCCTGTTATA
ATAGCATCATCTCCTGAAATGGCTAAAGAGATTCTAAAAACACATGATGCTATCTTTTCT
TCTCGTCCTGCATTGACTGCTGGTAAGTATATTAGCTTTAACTACTCAGACGTGTCATGG
GCACCTTATGGTGCACATTGGCGTCAATCTAGAAAGATCTACCAAACCGAGATATTTAGT
CCTAAAAGGCTTGAATCGTTTAAGTACATTCATGTTGAGGAAAGGAGAAATCTCATTTCT
AGTCTTCATGTTCTATCAGGAAAGCAATTTTTTCTCCGCCATCATTTGACAGAATTTACC
CTTAGCACTATAAGTAGGATGGTTATGAGTGGCACGTACCATAGGGGTGAATCAATAGAA
AATTTGCAAGGTATGTTAGATGAATGGTTTATCCTTGGTGGGGTGATTAATATTGGGGAT
TGGATACCTTGGCTTAATTGGCTTGACTTGCAAGGGTACATAAAAAGAATGAAGGCTTTG
GATAAAAAGTTGAGAGAATTTTTTAAGTATGTACTTGAAGATCATCATCACAAGGCTAAA
GGAAAGGAGGATTGTGTTCCAAAGGACATGGTTGATGTCTTGTTGCAACTAGTAGATGAC
CCTAATCTTGAAGTTAAGATTACCACCGATAACCTAATGGGATTAATCCTTGATTTGTTG
GCCGGTGGAACGGATACATCAGCAACAACAGTTGAATGGGCATTTCAAGAACTTATGAGG
AACCCGAATATGATAGAGAAGGCAAATGAAGAACTTGATAGAACAATAGGTAAAGGAAGA
TGGGTAGAAGAAGAGGACTTATCCCAACTACCTTATATAGAAGCTATAATTAAAGAGACA
TTTAGACTGCATCCGTTAGCTCCATTAATCCCTCCGCATTACTCCATAGAAGAATGCAAT
GTTGCTGGTTATGACGTACCAAAAGGGACAATGGTATTTGTAAACATATGGTCCTTAGGA
AGAAATCCTAATTATTGGGATAGGCCAGAAGAGTTTATTCTCGAAAGATTCTTAGAAAAT
GACATTAACATAAAGGGAAACAACTTTACAATGTTACCATTTGGTTCTGGAAGAAGGAGG
TGCCCTGGGTATAGCTTCGAGATCAAGCTTGTGGGAACAGCGTTGGCTAACTTGTTGCAT
GGATTCAATTGGAGATTAACATGTGACATAAAGCCAGAAGAAATAAGCATGAAAGAGATT
TATGGATTGACTACACACCCAGAAAAACCGATTTCTATGATCATGGAACCAAGACTTCCT
CTCCATCTTTATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400002116
PEP Infomation

pacid=37464730 transcript=PGSC0003DMT400002923 locus=PGSC0003DMG400001144 ID=PGSC0003DMT400002923.v4.03 annot-version=v4.03
Sequence

MEISFSSVFIALAWLLALAIICKVINHIVCPKRNVPPGPRPWPIIGNLNLIGSLPHESLH
TLSQKYGDLMLLKFGSKPVIIASSPEMAKEILKTHDAIFSSRPALTAGKYISFNYSDVSW
APYGAHWRQSRKIYQTEIFSPKRLESFKYIHVEERRNLISSLHVLSGKQFFLRHHLTEFT
LSTISRMVMSGTYHRGESIENLQGMLDEWFILGGVINIGDWIPWLNWLDLQGYIKRMKAL
DKKLREFFKYVLEDHHHKAKGKEDCVPKDMVDVLLQLVDDPNLEVKITTDNLMGLILDLL
AGGTDTSATTVEWAFQELMRNPNMIEKANEELDRTIGKGRWVEEEDLSQLPYIEAIIKET
FRLHPLAPLIPPHYSIEECNVAGYDVPKGTMVFVNIWSLGRNPNYWDRPEEFILERFLEN
DINIKGNNFTMLPFGSGRRRCPGYSFEIKLVGTALANLLHGFNWRLTCDIKPEEISMKEI
YGLTTHPEKPISMIMEPRLPLHLY*

Transcript Sequence

Transcript ID

PGSC0003DMT400002923
Transcript Infomation

pacid=37464730 locus=PGSC0003DMG400001144 ID=PGSC0003DMT400002923.v4.03 annot-version=v4.03
Sequence

ATGGAGATTTCTTTTTCTTCAGTATTTATAGCGTTAGCATGGCTACTAGCATTGGCTATT
ATTTGTAAAGTTATAAACCATATTGTATGCCCCAAAAGAAATGTTCCACCAGGTCCAAGG
CCATGGCCAATTATTGGAAATTTGAACCTTATTGGTTCACTCCCACATGAGTCTTTGCAC
ACTCTTTCACAAAAATATGGAGATTTAATGCTCCTAAAGTTCGGTTCCAAGCCTGTTATA
ATAGCATCATCTCCTGAAATGGCTAAAGAGATTCTAAAAACACATGATGCTATCTTTTCT
TCTCGTCCTGCATTGACTGCTGGTAAGTATATTAGCTTTAACTACTCAGACGTGTCATGG
GCACCTTATGGTGCACATTGGCGTCAATCTAGAAAGATCTACCAAACCGAGATATTTAGT
CCTAAAAGGCTTGAATCGTTTAAGTACATTCATGTTGAGGAAAGGAGAAATCTCATTTCT
AGTCTTCATGTTCTATCAGGAAAGCAATTTTTTCTCCGCCATCATTTGACAGAATTTACC
CTTAGCACTATAAGTAGGATGGTTATGAGTGGCACGTACCATAGGGGTGAATCAATAGAA
AATTTGCAAGGTATGTTAGATGAATGGTTTATCCTTGGTGGGGTGATTAATATTGGGGAT
TGGATACCTTGGCTTAATTGGCTTGACTTGCAAGGGTACATAAAAAGAATGAAGGCTTTG
GATAAAAAGTTGAGAGAATTTTTTAAGTATGTACTTGAAGATCATCATCACAAGGCTAAA
GGAAAGGAGGATTGTGTTCCAAAGGACATGGTTGATGTCTTGTTGCAACTAGTAGATGAC
CCTAATCTTGAAGTTAAGATTACCACCGATAACCTAATGGGATTAATCCTTGATTTGTTG
GCCGGTGGAACGGATACATCAGCAACAACAGTTGAATGGGCATTTCAAGAACTTATGAGG
AACCCGAATATGATAGAGAAGGCAAATGAAGAACTTGATAGAACAATAGGTAAAGGAAGA
TGGGTAGAAGAAGAGGACTTATCCCAACTACCTTATATAGAAGCTATAATTAAAGAGACA
TTTAGACTGCATCCGTTAGCTCCATTAATCCCTCCGCATTACTCCATAGAAGAATGCAAT
GTTGCTGGTTATGACGTACCAAAAGGGACAATGGTATTTGTAAACATATGGTCCTTAGGA
AGAAATCCTAATTATTGGGATAGGCCAGAAGAGTTTATTCTCGAAAGATTCTTAGAAAAT
GACATTAACATAAAGGGAAACAACTTTACAATGTTACCATTTGGTTCTGGAAGAAGGAGG
TGCCCTGGGTATAGCTTCGAGATCAAGCTTGTGGGAACAGCGTTGGCTAACTTGTTGCAT
GGATTCAATTGGAGATTAACATGTGACATAAAGCCAGAAGAAATAAGCATGAAAGAGATT
TATGGATTGACTACACACCCAGAAAAACCGATTTCTATGATCATGGAACCAAGACTTCCT
CTCCATCTTTATTAG