Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002869
CDS Infomation

pacid=37440191 polypeptide=PGSC0003DMP400002076 locus=PGSC0003DMG400001118 ID=PGSC0003DMT400002869.v4.03 annot-version=v4.03
Sequence

ATGAGACGCCATGGATGGCAACGTCCTCTTCACACATTGCAGATTGTGGGCATATCGGTG
TTCTGTTTCCTCTTAGTATTTTTTTACACCTTCATCGGTCTTCTGCTCGGTAATAGGGTT
GTTGAGATCACTGTCACCTCTGTTTTCTCCTTTGTGGCACTTTCTGCTGCATTTCTGTTT
GTAAGGTGTGCGGCTATCGATCCAACTGATAAGACGAGGTTCAGGATGAGGAGGAAAAGC
ACTCGCACTGCTTTTTCGAATCTTAATTATGGATTTGTATTGGGACAGATTGTTGTGAGA
TTTCTTAGGAGAATTGAGCGCAGAGTGCTTAAGACATTTATAAGGAGAAAGTACCTGGAT
CCTTTGAAGAGTAATCTTCATTTGGAGCCTTTGCTCACATTTCCACTACTCGTCAAAGAT
GATTTGGTTGCGCAACAGACAAAAGATGATGACATTTCGTTTTGTTCGCTTTGTGATTTT
GAGGTTAAAAAGCGTAGCAAACACTGTAGGACCTGCAATCGATGTGTGGAGGGATTTGAT
CACCACTGCAGATGGTTAAACAATTGTGTCGGGAAGAAGAACTATACCAGCTTCATTTTT
CTAATGATATTCCTCTTGATAATGCTGCTTATTGAAGGAGGGACAGCTGCTGCAATATTT
GTAAGGTGCTTTGCCAACAAAAGGAGCATTGAGCTAGAGATTCAGAGAAGATTCAGTGCC
AAGTTCCCTAGAGGAGTTCTGGCAACAATTTGTGTAATCTTATTTTTCATGACATCGTAT
TGTGCAGCAGCGCTGGGACAGCTTTTCTTATTTCATATAGTTCTCATCCGGAAGGGCATG
AGAACTTATGATTACATCTTGGCAATGAGAGAGGAGAACGAGTCTATGGAGCTTTTGGAG
TCATCAGAAGATTCAGATTCCTCCTCTGATGAGAGTATTGACTTTGATTCACCTGAGAAG
CCGTCACTTGTTTCAAGACTTACATGCAGAGAAAAAGGAATGAATCAGAGTTTGGAGACA
GTATCTATAAAAATCGATGGAGAATCATCCACATTGAAAGAAAAGCGAGGTTTTCGAGCT
AACATTGACCCCTGGAAACTTATAAGTATGAGTAGAGAGAAAGCACTAAAAGCAGCGGAA
AAGGCAAAGGAACGGCTCATCAAGCAGAAGGAAATAGTAGACCCTTTGAAGCCGCTACCA
CTAGAAACAAGAAGTGGACCACTGATGAATTTGGACACTAATAGAGTTCCCTTATCTGTG
GCTAGCAGTAGGGAACTTGCTTTATCGAAAGAAGTGATCATCACAAAAGGGAGGGTAATC
CGTGGCGGGGGATCACCAATGCAGCTTTCTAGTCCCAGGCGAAGACATTCCTATTCTCCT
ACAGTTGTCCCTACACCTCGTAGTGGTAATACTACTGTACCATCCCCATCACCAAAGCAT
AGATATAAAGGAAATTTCGACTTGAAGTTAACGCAAGTCTCCAAGGAACTTGAGACTTAC
ATTTCAAGGCAGGTATTATTCTCTGCCTTGAAGAAAGAAAATGAAACTGCAGCATCGCCC
AGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400002076
PEP Infomation

pacid=37440191 transcript=PGSC0003DMT400002869 locus=PGSC0003DMG400001118 ID=PGSC0003DMT400002869.v4.03 annot-version=v4.03
Sequence

MRRHGWQRPLHTLQIVGISVFCFLLVFFYTFIGLLLGNRVVEITVTSVFSFVALSAAFLF
VRCAAIDPTDKTRFRMRRKSTRTAFSNLNYGFVLGQIVVRFLRRIERRVLKTFIRRKYLD
PLKSNLHLEPLLTFPLLVKDDLVAQQTKDDDISFCSLCDFEVKKRSKHCRTCNRCVEGFD
HHCRWLNNCVGKKNYTSFIFLMIFLLIMLLIEGGTAAAIFVRCFANKRSIELEIQRRFSA
KFPRGVLATICVILFFMTSYCAAALGQLFLFHIVLIRKGMRTYDYILAMREENESMELLE
SSEDSDSSSDESIDFDSPEKPSLVSRLTCREKGMNQSLETVSIKIDGESSTLKEKRGFRA
NIDPWKLISMSREKALKAAEKAKERLIKQKEIVDPLKPLPLETRSGPLMNLDTNRVPLSV
ASSRELALSKEVIITKGRVIRGGGSPMQLSSPRRRHSYSPTVVPTPRSGNTTVPSPSPKH
RYKGNFDLKLTQVSKELETYISRQVLFSALKKENETAASPR*

Transcript Sequence

Transcript ID

PGSC0003DMT400002869
Transcript Infomation

pacid=37440191 locus=PGSC0003DMG400001118 ID=PGSC0003DMT400002869.v4.03 annot-version=v4.03
Sequence

ATGAGACGCCATGGATGGCAACGTCCTCTTCACACATTGCAGATTGTGGGCATATCGGTG
TTCTGTTTCCTCTTAGTATTTTTTTACACCTTCATCGGTCTTCTGCTCGGTAATAGGGTT
GTTGAGATCACTGTCACCTCTGTTTTCTCCTTTGTGGCACTTTCTGCTGCATTTCTGTTT
GTAAGGTGTGCGGCTATCGATCCAACTGATAAGACGAGGTTCAGGATGAGGAGGAAAAGC
ACTCGCACTGCTTTTTCGAATCTTAATTATGGATTTGTATTGGGACAGATTGTTGTGAGA
TTTCTTAGGAGAATTGAGCGCAGAGTGCTTAAGACATTTATAAGGAGAAAGTACCTGGAT
CCTTTGAAGAGTAATCTTCATTTGGAGCCTTTGCTCACATTTCCACTACTCGTCAAAGAT
GATTTGGTTGCGCAACAGACAAAAGATGATGACATTTCGTTTTGTTCGCTTTGTGATTTT
GAGGTTAAAAAGCGTAGCAAACACTGTAGGACCTGCAATCGATGTGTGGAGGGATTTGAT
CACCACTGCAGATGGTTAAACAATTGTGTCGGGAAGAAGAACTATACCAGCTTCATTTTT
CTAATGATATTCCTCTTGATAATGCTGCTTATTGAAGGAGGGACAGCTGCTGCAATATTT
GTAAGGTGCTTTGCCAACAAAAGGAGCATTGAGCTAGAGATTCAGAGAAGATTCAGTGCC
AAGTTCCCTAGAGGAGTTCTGGCAACAATTTGTGTAATCTTATTTTTCATGACATCGTAT
TGTGCAGCAGCGCTGGGACAGCTTTTCTTATTTCATATAGTTCTCATCCGGAAGGGCATG
AGAACTTATGATTACATCTTGGCAATGAGAGAGGAGAACGAGTCTATGGAGCTTTTGGAG
TCATCAGAAGATTCAGATTCCTCCTCTGATGAGAGTATTGACTTTGATTCACCTGAGAAG
CCGTCACTTGTTTCAAGACTTACATGCAGAGAAAAAGGAATGAATCAGAGTTTGGAGACA
GTATCTATAAAAATCGATGGAGAATCATCCACATTGAAAGAAAAGCGAGGTTTTCGAGCT
AACATTGACCCCTGGAAACTTATAAGTATGAGTAGAGAGAAAGCACTAAAAGCAGCGGAA
AAGGCAAAGGAACGGCTCATCAAGCAGAAGGAAATAGTAGACCCTTTGAAGCCGCTACCA
CTAGAAACAAGAAGTGGACCACTGATGAATTTGGACACTAATAGAGTTCCCTTATCTGTG
GCTAGCAGTAGGGAACTTGCTTTATCGAAAGAAGTGATCATCACAAAAGGGAGGGTAATC
CGTGGCGGGGGATCACCAATGCAGCTTTCTAGTCCCAGGCGAAGACATTCCTATTCTCCT
ACAGTTGTCCCTACACCTCGTAGTGGTAATACTACTGTACCATCCCCATCACCAAAGCAT
AGATATAAAGGAAATTTCGACTTGAAGTTAACGCAAGTCTCCAAGGAACTTGAGACTTAC
ATTTCAAGGCAGGTATTATTCTCTGCCTTGAAGAAAGAAAATGAAACTGCAGCATCGCCC
AGATAA