Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002816
CDS Infomation

pacid=37446652 polypeptide=PGSC0003DMP400002039 locus=PGSC0003DMG400001096 ID=PGSC0003DMT400002816.v4.03 annot-version=v4.03
Sequence

ATGATCGGTTGGTTTAAGCAGTTACATACTGCTTTTGGGGCTTCCTTTCTATGGCTTGTT
TGCCTCGTTTACTTCACACAGGGGTTCAGATCTTTTGTCTGGACAGCAGTTTCATATCAG
TTGAAAGACAACTTGAAGCTATCACCATCAGCCTCCCAATTTGTCACTTCAATAGCATTC
TTTCCGTGGAGCGTAAAACCTTTATATGGGATATTATCGGATTGCTTTCCAATTAGAGGA
AGGAAAAGAATCCCCTACCTTACGCTTGCAACTTTGCTCTCGCTGTTGCCATGGCTCATT
TTAGGGTTAAGTGATTTCCTGAGAAATACGAGGATAGAACTCATGATTCTTTTGACACTG
CAGAACCTGGGTTCTGCAATGGCTGATGTTGTAATTGACGCAATGATCGCTGAGGCAGTA
AGATTGGAGAGGGCATCATTTGCTGGTGATCTTCAGTCAGTATCTTGGCTGTCTATGGCA
TTCGGAGGAATCTGTGGTAGTTTGCTAGGAGGATATGCATTAGACAATTTACGGATAGAT
ATGATTTTCCTCCTTTTCTCTGTCTTACCTGCTTTGCAGCTCTTTTCGTGTGGTTTGGTT
GAGGAGGGTTCTGTACAAGTTAAAGCATTCCCTGAAGGTTCTGCATTTAATGGTTCTGAT
ATGACGAGTGGAATTATTGATGAAGAAGAGCAATTCTCTGGTGAAAAATCAAAAATTAGT
ACTTTGAGGAGAAAGAAGAGCCAGAAAAATACAAAAAGAGCGCCAACGACGGAAAAAATA
TTTCAGGCTCCTGAAAAAAACGGATCATCAGTGTCTCCGTGGTATCAATCACTGAAAATG
GCCACTTACACATTATTTAGGGCATTCCGCCAGCCAGCCATTTTGAGACCAATGGCTTGG
TTCTTTTTGGCTCACGTGACAGTTCCAAATCTCTCGACGGTTATGTTCTATTATCAGACA
GAGTTCTTAAAACTAGAGGCATCTTTCCTTGGAACAGCACGTGTTCTTGGATGGTTGAGT
CTCATGATCGGGACCTTGACTTACAATCGCTATTTAAAAAAGATGAGATTGCGACATATT
CTCATGTTTACTCAAGTTTGCTTGGCCATTCTGACTGTTCTAGATATGGTTTTGGTTTCT
CGAGCTAATGTTTCATTAGGTATCTCAGACAAGGTTACAGTGCTATTTGGTTCTGCTCTT
TCTGATGGCATCAATCAATTCAAGTTCATGCCCTTTCTTATCTTATCGGGACAGCTTTGT
CCTCCAGGCGTTGAAGGGACTTTATTTGCATTATTCATGTCGATAAACAACTTAGGTTCT
ACGGTGGGATCCTTCGTAGGAGCAGGGCTGGCTTCAGTTCTAAACATCTCCTCAGGATCT
TTTGACAATCTCTTCTTAGGCATTGGTATACAGGTTCTCTGCACTTTCATCCCAGTGGCC
TTCATTTTCTTGATTCCAAAGGAAGCTACAGGAATATCAGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400002039
PEP Infomation

pacid=37446652 transcript=PGSC0003DMT400002816 locus=PGSC0003DMG400001096 ID=PGSC0003DMT400002816.v4.03 annot-version=v4.03
Sequence

MIGWFKQLHTAFGASFLWLVCLVYFTQGFRSFVWTAVSYQLKDNLKLSPSASQFVTSIAF
FPWSVKPLYGILSDCFPIRGRKRIPYLTLATLLSLLPWLILGLSDFLRNTRIELMILLTL
QNLGSAMADVVIDAMIAEAVRLERASFAGDLQSVSWLSMAFGGICGSLLGGYALDNLRID
MIFLLFSVLPALQLFSCGLVEEGSVQVKAFPEGSAFNGSDMTSGIIDEEEQFSGEKSKIS
TLRRKKSQKNTKRAPTTEKIFQAPEKNGSSVSPWYQSLKMATYTLFRAFRQPAILRPMAW
FFLAHVTVPNLSTVMFYYQTEFLKLEASFLGTARVLGWLSLMIGTLTYNRYLKKMRLRHI
LMFTQVCLAILTVLDMVLVSRANVSLGISDKVTVLFGSALSDGINQFKFMPFLILSGQLC
PPGVEGTLFALFMSINNLGSTVGSFVGAGLASVLNISSGSFDNLFLGIGIQVLCTFIPVA
FIFLIPKEATGISA*

Transcript Sequence

Transcript ID

PGSC0003DMT400002816
Transcript Infomation

pacid=37446652 locus=PGSC0003DMG400001096 ID=PGSC0003DMT400002816.v4.03 annot-version=v4.03
Sequence

ATGATCGGTTGGTTTAAGCAGTTACATACTGCTTTTGGGGCTTCCTTTCTATGGCTTGTT
TGCCTCGTTTACTTCACACAGGGGTTCAGATCTTTTGTCTGGACAGCAGTTTCATATCAG
TTGAAAGACAACTTGAAGCTATCACCATCAGCCTCCCAATTTGTCACTTCAATAGCATTC
TTTCCGTGGAGCGTAAAACCTTTATATGGGATATTATCGGATTGCTTTCCAATTAGAGGA
AGGAAAAGAATCCCCTACCTTACGCTTGCAACTTTGCTCTCGCTGTTGCCATGGCTCATT
TTAGGGTTAAGTGATTTCCTGAGAAATACGAGGATAGAACTCATGATTCTTTTGACACTG
CAGAACCTGGGTTCTGCAATGGCTGATGTTGTAATTGACGCAATGATCGCTGAGGCAGTA
AGATTGGAGAGGGCATCATTTGCTGGTGATCTTCAGTCAGTATCTTGGCTGTCTATGGCA
TTCGGAGGAATCTGTGGTAGTTTGCTAGGAGGATATGCATTAGACAATTTACGGATAGAT
ATGATTTTCCTCCTTTTCTCTGTCTTACCTGCTTTGCAGCTCTTTTCGTGTGGTTTGGTT
GAGGAGGGTTCTGTACAAGTTAAAGCATTCCCTGAAGGTTCTGCATTTAATGGTTCTGAT
ATGACGAGTGGAATTATTGATGAAGAAGAGCAATTCTCTGGTGAAAAATCAAAAATTAGT
ACTTTGAGGAGAAAGAAGAGCCAGAAAAATACAAAAAGAGCGCCAACGACGGAAAAAATA
TTTCAGGCTCCTGAAAAAAACGGATCATCAGTGTCTCCGTGGTATCAATCACTGAAAATG
GCCACTTACACATTATTTAGGGCATTCCGCCAGCCAGCCATTTTGAGACCAATGGCTTGG
TTCTTTTTGGCTCACGTGACAGTTCCAAATCTCTCGACGGTTATGTTCTATTATCAGACA
GAGTTCTTAAAACTAGAGGCATCTTTCCTTGGAACAGCACGTGTTCTTGGATGGTTGAGT
CTCATGATCGGGACCTTGACTTACAATCGCTATTTAAAAAAGATGAGATTGCGACATATT
CTCATGTTTACTCAAGTTTGCTTGGCCATTCTGACTGTTCTAGATATGGTTTTGGTTTCT
CGAGCTAATGTTTCATTAGGTATCTCAGACAAGGTTACAGTGCTATTTGGTTCTGCTCTT
TCTGATGGCATCAATCAATTCAAGTTCATGCCCTTTCTTATCTTATCGGGACAGCTTTGT
CCTCCAGGCGTTGAAGGGACTTTATTTGCATTATTCATGTCGATAAACAACTTAGGTTCT
ACGGTGGGATCCTTCGTAGGAGCAGGGCTGGCTTCAGTTCTAAACATCTCCTCAGGATCT
TTTGACAATCTCTTCTTAGGCATTGGTATACAGGTTCTCTGCACTTTCATCCCAGTGGCC
TTCATTTTCTTGATTCCAAAGGAAGCTACAGGAATATCAGCATAG