Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002790
CDS Infomation

pacid=37432157 polypeptide=PGSC0003DMP400002018 locus=PGSC0003DMG400001083 ID=PGSC0003DMT400002790.v4.03 annot-version=v4.03
Sequence

ATGGCTGTAGAGGCTTTTGCCAAAACAAATTTGATGGAAGATATTGATGATGACGATGAC
ATGCCTTTAGTTTTCAAACGAAGTAGTACCACATCAAAGCAGAATCAGTCCAATTCATCA
TCTCAGAAGCAGGATGGAAGATCGGGGCGGCAAGTTCCTGATGTACGTTCTCCTAATGGC
CAGAGCTCTAGTACTCATAAAGTTAAGACAGCCGCCTCTTCTAAGGCATCTCCAGCAGTT
TCACCTTTAACCAGTCCGAAAGCAGCGCCTCTGTCAAGCAGGACATCTCCTGCACCAAAC
TTCAGGACATCTCCTGCACCAAACTCCAGGACACCTCCTGCACCAAACTCCAGGACATCT
CCTGCACCGAACTCAAGGCCGTCATCTTCTGCAGGTAATCAGGCAAAAAATGTTAATCAA
CAATCCAATATTGCTCCTAAGGAGTCGAAGCAAGCTATTGAACCAAAATCTGAACCTAAT
GATGAAGCTGAGGATTCTGAAGATGATAAACCATTGAGTGCTAGGGTCCCTTCTGGGTTA
TCTAAGAGCAATTCTATTCACGCCAACAACGTGCTTGGTACTTCAACATCAGTTCAGAAG
TCTAGACCTCCCAAAAAAGAGGATTCAGATGATGAAATTCCCTTAGCATCAAGGTTTCAA
ATGAAATCCAGTGCAGGGGCTTCCACTAGCAAGTTTTCTAGTTCTGAAGAAGTTAAGCCT
AAGATTCGTCAAAATGGTTTGCCATCTGCGACAGTTTTAAGTAAGAGACCCCCTGGTGAG
GTCAAGTCTGCTGCTCAGGCTTCAGTTAAAAAGCCTAGACTTTCTGATGCATCTACACCT
GTTTCTAGTAAGCAACCGTCTGTTAAAACTGAAAAGAAGACAGAGGACGATGACGACGAA
GTTCCTTTATCTCAGAGAATAAAAAAGGCAGTAGCTTCAGCTTCAGCTTCAGCTAGTAAA
GTGTCATCTGTGAAGAAAGCAACTAAAGTTGTTTCGTCATCGATGAAGAAAACAAAGAAG
AAGTTGAAAAAACCCAAGTACTCTAAATCGTCAAAACTGCAGCCAAGCTCTGGTGATGGG
CAAAAATGGACTACATTGGAACACAATGGTGTGATTTTTCCACCTCCATACAAACCTCAT
GGGGTTAAGATGCTCTACAAGGGAAAGCCCGTGGATCTTACTCCAGAGCAGGAAGAGGTC
GCAACAATGTATGCCGTGATGTTAGACACTGAATACTTGACTAAACAGCAGTTCAAAGAG
AATTTCATGAATGACTGGAGAAAAATACTTGGAAAAAATCATGTCATTCAAAAGTTAGAA
GAGTGTAATTTTACCCCAATATATGAGTGGCATCAGAGTGAGAAGGAGAAGAAGAAGCAA
ATGAGTTCAGAAGAGAAGAAGGCATTGAGAGAAGAGAAACTTAAGCAAGAAGAGAAATAC
ATGTGGGCTATTGTGGATGGTGTTAAAGAGAAGGTTGGAAACTTTCGGGTTGAACCACCT
GGATTGTTCCGTGGCCGTGGGGAACATCCAAAGATGGGAAAGCTAAAGAGACGGATCCGG
CCAAATGATATCACAATAAATATTGGAAAGGGTGTTCCAGTACCGGAGTGCCCCATCCCT
GGCCAAAGATGGAAGGAAGTAAGGCATGACAACACAGTAACATGGTTAGCTTTCTGGAAT
GACCCTATTAATCCAAGAGAATTCAAATACGTTTTCCTAGCAGCCAGTAGTTCCTTGAAA
GGGCAAAGCGATAAGGAGAAGTATGAGAAAGCAAGGCGTTTGAAGGATTACATAGAAGGC
ATTAGATCTGCATATACAAAAGATTTTACAAGTAAAGATCCTGTGAAGCGTCAGATTGCA
GTTGCAACTTATCTTATCGATAAATTAGCTCTGAGGGCAGGGAATGAGAAGGATGATGAC
GAAGCTGATACAGTTGGTTGCTGTACTTTGAAAGTAGAGAATGTAGAGCCAGTACCTCCA
AATATTTTGAAGTTCGATTTTCTTGGTAAAGATTCTATCAGGTACCAAAATGAGGTGGCT
GTGTATGAACCTGTTTTTAAAGCTATTCAACAGTTCCGAAGTGGAAAAAAGGGCGGTGAC
GATCTTTTTGACAAGCTTGATACGAGTAAGCTTAATGCCCATCTTAAGGAACTCATGCCA
GGGCTCACAGCAAAAGTATTTCGTACATATAATGCATCTTTTACATTGGAGCAGCAATTG
ACTAAGCTCACACAAGGGGGGGAGCTCGCTGATAAAGTTGCGGTATATAATGTGGCAAAT
AAAGAGGTTGCAATAATTTGTAATCACCAGCGTACTGTCTCGAAGTCCCACAGTGTGCAA
ATTTCAAGGTTGAATGAGAAGATAGATGAGTTAAAGGCTATTTTGGAAGAATTCAAAGTA
GATTTGGCTCGGGCCAAAAAAGGGAAGCCTCCAGTGAAAGGCGCCGATGGCAAGGCGAAG
AGGAACTTGACCCCTGAAGCATTACAGAAAAAAATAGACCAAACGAATGTGAAGATTGAT
AACATAGAGAGGCAAATAGAAACGAAAGAAGAATTGAAAACTGTGGCTTTGGGCACATCA
AAAATCAACTATTTGGATCCTAGGATCACTGTGGCATGGTGTAAGCGCCATGAGGTTCCC
ATCGAAAAGATGTTCAACAAGTCTCTTCTAGCAAAGTTTGCCTGGGCGATGGATGTTGAA
CCTTCCTTCACATTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400002018
PEP Infomation

pacid=37432157 transcript=PGSC0003DMT400002790 locus=PGSC0003DMG400001083 ID=PGSC0003DMT400002790.v4.03 annot-version=v4.03
Sequence

MAVEAFAKTNLMEDIDDDDDMPLVFKRSSTTSKQNQSNSSSQKQDGRSGRQVPDVRSPNG
QSSSTHKVKTAASSKASPAVSPLTSPKAAPLSSRTSPAPNFRTSPAPNSRTPPAPNSRTS
PAPNSRPSSSAGNQAKNVNQQSNIAPKESKQAIEPKSEPNDEAEDSEDDKPLSARVPSGL
SKSNSIHANNVLGTSTSVQKSRPPKKEDSDDEIPLASRFQMKSSAGASTSKFSSSEEVKP
KIRQNGLPSATVLSKRPPGEVKSAAQASVKKPRLSDASTPVSSKQPSVKTEKKTEDDDDE
VPLSQRIKKAVASASASASKVSSVKKATKVVSSSMKKTKKKLKKPKYSKSSKLQPSSGDG
QKWTTLEHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMYAVMLDTEYLTKQQFKE
NFMNDWRKILGKNHVIQKLEECNFTPIYEWHQSEKEKKKQMSSEEKKALREEKLKQEEKY
MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPNDITINIGKGVPVPECPIP
GQRWKEVRHDNTVTWLAFWNDPINPREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEG
IRSAYTKDFTSKDPVKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPP
NILKFDFLGKDSIRYQNEVAVYEPVFKAIQQFRSGKKGGDDLFDKLDTSKLNAHLKELMP
GLTAKVFRTYNASFTLEQQLTKLTQGGELADKVAVYNVANKEVAIICNHQRTVSKSHSVQ
ISRLNEKIDELKAILEEFKVDLARAKKGKPPVKGADGKAKRNLTPEALQKKIDQTNVKID
NIERQIETKEELKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFNKSLLAKFAWAMDVE
PSFTF*

Transcript Sequence

Transcript ID

PGSC0003DMT400002790
Transcript Infomation

pacid=37432157 locus=PGSC0003DMG400001083 ID=PGSC0003DMT400002790.v4.03 annot-version=v4.03
Sequence

ATGGCTGTAGAGGCTTTTGCCAAAACAAATTTGATGGAAGATATTGATGATGACGATGAC
ATGCCTTTAGTTTTCAAACGAAGTAGTACCACATCAAAGCAGAATCAGTCCAATTCATCA
TCTCAGAAGCAGGATGGAAGATCGGGGCGGCAAGTTCCTGATGTACGTTCTCCTAATGGC
CAGAGCTCTAGTACTCATAAAGTTAAGACAGCCGCCTCTTCTAAGGCATCTCCAGCAGTT
TCACCTTTAACCAGTCCGAAAGCAGCGCCTCTGTCAAGCAGGACATCTCCTGCACCAAAC
TTCAGGACATCTCCTGCACCAAACTCCAGGACACCTCCTGCACCAAACTCCAGGACATCT
CCTGCACCGAACTCAAGGCCGTCATCTTCTGCAGGTAATCAGGCAAAAAATGTTAATCAA
CAATCCAATATTGCTCCTAAGGAGTCGAAGCAAGCTATTGAACCAAAATCTGAACCTAAT
GATGAAGCTGAGGATTCTGAAGATGATAAACCATTGAGTGCTAGGGTCCCTTCTGGGTTA
TCTAAGAGCAATTCTATTCACGCCAACAACGTGCTTGGTACTTCAACATCAGTTCAGAAG
TCTAGACCTCCCAAAAAAGAGGATTCAGATGATGAAATTCCCTTAGCATCAAGGTTTCAA
ATGAAATCCAGTGCAGGGGCTTCCACTAGCAAGTTTTCTAGTTCTGAAGAAGTTAAGCCT
AAGATTCGTCAAAATGGTTTGCCATCTGCGACAGTTTTAAGTAAGAGACCCCCTGGTGAG
GTCAAGTCTGCTGCTCAGGCTTCAGTTAAAAAGCCTAGACTTTCTGATGCATCTACACCT
GTTTCTAGTAAGCAACCGTCTGTTAAAACTGAAAAGAAGACAGAGGACGATGACGACGAA
GTTCCTTTATCTCAGAGAATAAAAAAGGCAGTAGCTTCAGCTTCAGCTTCAGCTAGTAAA
GTGTCATCTGTGAAGAAAGCAACTAAAGTTGTTTCGTCATCGATGAAGAAAACAAAGAAG
AAGTTGAAAAAACCCAAGTACTCTAAATCGTCAAAACTGCAGCCAAGCTCTGGTGATGGG
CAAAAATGGACTACATTGGAACACAATGGTGTGATTTTTCCACCTCCATACAAACCTCAT
GGGGTTAAGATGCTCTACAAGGGAAAGCCCGTGGATCTTACTCCAGAGCAGGAAGAGGTC
GCAACAATGTATGCCGTGATGTTAGACACTGAATACTTGACTAAACAGCAGTTCAAAGAG
AATTTCATGAATGACTGGAGAAAAATACTTGGAAAAAATCATGTCATTCAAAAGTTAGAA
GAGTGTAATTTTACCCCAATATATGAGTGGCATCAGAGTGAGAAGGAGAAGAAGAAGCAA
ATGAGTTCAGAAGAGAAGAAGGCATTGAGAGAAGAGAAACTTAAGCAAGAAGAGAAATAC
ATGTGGGCTATTGTGGATGGTGTTAAAGAGAAGGTTGGAAACTTTCGGGTTGAACCACCT
GGATTGTTCCGTGGCCGTGGGGAACATCCAAAGATGGGAAAGCTAAAGAGACGGATCCGG
CCAAATGATATCACAATAAATATTGGAAAGGGTGTTCCAGTACCGGAGTGCCCCATCCCT
GGCCAAAGATGGAAGGAAGTAAGGCATGACAACACAGTAACATGGTTAGCTTTCTGGAAT
GACCCTATTAATCCAAGAGAATTCAAATACGTTTTCCTAGCAGCCAGTAGTTCCTTGAAA
GGGCAAAGCGATAAGGAGAAGTATGAGAAAGCAAGGCGTTTGAAGGATTACATAGAAGGC
ATTAGATCTGCATATACAAAAGATTTTACAAGTAAAGATCCTGTGAAGCGTCAGATTGCA
GTTGCAACTTATCTTATCGATAAATTAGCTCTGAGGGCAGGGAATGAGAAGGATGATGAC
GAAGCTGATACAGTTGGTTGCTGTACTTTGAAAGTAGAGAATGTAGAGCCAGTACCTCCA
AATATTTTGAAGTTCGATTTTCTTGGTAAAGATTCTATCAGGTACCAAAATGAGGTGGCT
GTGTATGAACCTGTTTTTAAAGCTATTCAACAGTTCCGAAGTGGAAAAAAGGGCGGTGAC
GATCTTTTTGACAAGCTTGATACGAGTAAGCTTAATGCCCATCTTAAGGAACTCATGCCA
GGGCTCACAGCAAAAGTATTTCGTACATATAATGCATCTTTTACATTGGAGCAGCAATTG
ACTAAGCTCACACAAGGGGGGGAGCTCGCTGATAAAGTTGCGGTATATAATGTGGCAAAT
AAAGAGGTTGCAATAATTTGTAATCACCAGCGTACTGTCTCGAAGTCCCACAGTGTGCAA
ATTTCAAGGTTGAATGAGAAGATAGATGAGTTAAAGGCTATTTTGGAAGAATTCAAAGTA
GATTTGGCTCGGGCCAAAAAAGGGAAGCCTCCAGTGAAAGGCGCCGATGGCAAGGCGAAG
AGGAACTTGACCCCTGAAGCATTACAGAAAAAAATAGACCAAACGAATGTGAAGATTGAT
AACATAGAGAGGCAAATAGAAACGAAAGAAGAATTGAAAACTGTGGCTTTGGGCACATCA
AAAATCAACTATTTGGATCCTAGGATCACTGTGGCATGGTGTAAGCGCCATGAGGTTCCC
ATCGAAAAGATGTTCAACAAGTCTCTTCTAGCAAAGTTTGCCTGGGCGATGGATGTTGAA
CCTTCCTTCACATTCTAA