Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002749
CDS Infomation

pacid=37448657 polypeptide=PGSC0003DMP400001987 locus=PGSC0003DMG400001066 ID=PGSC0003DMT400002749.v4.03 annot-version=v4.03
Sequence

ATGTGTGGTGCAGCACAAGAAATAGAACAATTATCAAGAGAAAGTAGTCATTATAGTCTT
TCTACTGGAATTTTGCCTTCACTTGGTGCAAGAAGTAATAGAAGAGTCAAGCTTAAAAGA
TTTATTATTTCACCTTATGATCGACAATACAGGTTATGGGAGACATTTCTAATTGTGCTG
GTTGTTTACACTGCTTGGGTGTCCCCGTTCGAGTTTGGCTTTCTAGGAAAACCAGAAGGA
CCACTCGCTAAGACGGACAATGTAGTCAATGGATTCTTCGCGATTGATATCATTCTTACC
TTCTTTGTAGCTTTCTTGGATAGAGCCACTTATCTACTTGTCGATGAACACAAAAAGATT
GCTTGGAAGTATATGAGTACTTGGTTCTTATTTGATGTCATATCAACAATCCCTTCAGAA
CTTGCTGTGAAGATTTCCCCAAAACCTTTACGTCAGTATGGATTATTCAATATGCTTCGT
TTGTGGCGTCTAAGAAGAGTTAGTTCATTGTTTGCCAGATTGGAGAAAGATAGGAACTTC
AATTACTTTTGGGTTCGATGTGCAAAGCTTGTTTGTGTCACTCTTTTTGCTGTTCATTGT
GCCGGATGCTTTTATTATCTTATCGCGGCCCATTATCCTGATCCCAAGAAGACATGGATT
GGGGCCTCTATGGATGACTTCCTTAATCAGAGCTTATGGATTCGTTATATCACTTCTATT
TATTGGTCGATAACTACTCTCACTACAGTCGGTTATGGAGATCTGCATCCAGAGAATACG
CGGGAAATGATCTTTGATATCTTCTACATGCTCTTTAACTTGGGATTGACAGCATACTTA
ATAGGAAATATGACTAACTTGGTTGTACACGGGACGAGTAGGACTAGAAAATTTAGAGAT
ACAATTCAAGCTGCTTCGAGCTTTGCACAGAGGAACCAATTGCCTGCTCGTCTCCAAGAT
CAGATGCTTGCACACTTGTGCTTGAAGTTCAGAACAGACTCAGAAGGGCTGCAGCAGCAA
GAGACACTCGAGTCTCTTCCTAAAGCCATCCGTTCAAGTGTTTCACATTTTCTTTTCTAC
TCTTTAGTAGATAAGGTTTACCTGTTTCGTGGAGTGTCAAACGATCTACTCTTCCAGCTG
GTCTCCGAGATGAAGGCAGAGTACTTTCCTCCCAAAGAGGATGTCATTTTGCAGAATGAA
GCACCAACAGACTTCTATATTCTTGTAACAGGAGCTGTGGATCTAGTGGTTCTTAAAAAC
GGAGTTGAACAGGTTGTCGGGGAGGTCAGGGCAGGTGATCTTTGTGGTGAAATCGGGGTT
CTTTGTTATAGGCCTCAACTATTTACAGTACGAACGAAGAGACTGTGCCAGCTACTACGT
ATGAATCGTACCACATTTCTGAATATCGTCCAGGCCAATGTTGGGGACGGGACAATAATC
ATGAGTAATCTCCTTCAGCATTTGAAGGAAATGAAGAATCCAATTATGGAGGGTGTTCTA
CTTGAGACCGAGCATATGCTAGCTCGCGGTAGAATGGACTTGCCTCTCACCCTTTGCTTT
GCAACACTTAGAAGTGATGACTTATTGTTGCATCACTTGTTGAAACGCGGTCTTGATCCA
AATGAAGCAGATAACAATGGAAGATCCGCGTTGCATATCGCTGCGTCTAAAGGCATTGAG
AACTGTGTGGTTCTTCTGCTCGATTTCGGGGCTGATCCCAATAGTAGAGATTCAGAAGGC
AATGTGCCATTGTGGGAGGCTATCATGGGGAAGCACGAGTCAGTTATCCAGTTACTCGTT
AACAACGGTGCTAAACTATCAGCTGGTGATGTGGGACATTTCGCCTGCGTTGCTGTTGAA
CAAAACAACTTGAGTTTGCTCAAGGAGATTGTCCGTTATGGCGGGGATGTCACGCTTCCC
AAGATCAATGGTTCATCAGCTCTCCATGTTGCTGTTTGTGAAGGTAACATAGAAATAGTA
AAGTATCTCTTGGATCGAGGGGCTAACGTTGATCAACCAGACGAACATAATTGGACCCCC
CGGGACCTTGCTGAGCAACAAGGACATGAAGACATCAAAGAACTCTTTGAATCCAGGGTA
ATGATGAGAACTCGATCCGTTGATCCTATCCCCGAGGAACGAGGGGTTAGATTTCTTGGG
AGGTTCAAAAGTGAACCAACAATCACCCCTGCATCCCATGGAGTCTCATTTCTAGGACTA
GACGGATCATTAGGGCGTTCACGTCCTAGACGTAGGTCTAATAACTTCCACAACTCATTA
TTCGGGATAATGTCAGCAAAGCAGACCAATGAGCACGACGTGCTTTTATCTGCAAACGAC
AGTAATGTAAGTGTCATGACAACCAAGACTTATGCTCCCCGAGTGACAGTGTGTTGCCCT
GAGAAAGGAGACAACGGGGGAAAACTCATTTTACTCCCACAGAGTTTTAAAGAGCTACTT
CAAATTGGTTCTAGTAGATATGGTATCTCTCAGGCCAAAGTTGTAAGCAAAGATGGAGCT
GAAATCGACGAAATAGAGTTGATCAGAGATGGTGATCGTTTAGTTTTTGTTAGCGATAAA
GATAACAATATTGATGAAGCTAAATCATCAGAATTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400001987
PEP Infomation

pacid=37448657 transcript=PGSC0003DMT400002749 locus=PGSC0003DMG400001066 ID=PGSC0003DMT400002749.v4.03 annot-version=v4.03
Sequence

MCGAAQEIEQLSRESSHYSLSTGILPSLGARSNRRVKLKRFIISPYDRQYRLWETFLIVL
VVYTAWVSPFEFGFLGKPEGPLAKTDNVVNGFFAIDIILTFFVAFLDRATYLLVDEHKKI
AWKYMSTWFLFDVISTIPSELAVKISPKPLRQYGLFNMLRLWRLRRVSSLFARLEKDRNF
NYFWVRCAKLVCVTLFAVHCAGCFYYLIAAHYPDPKKTWIGASMDDFLNQSLWIRYITSI
YWSITTLTTVGYGDLHPENTREMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKFRD
TIQAASSFAQRNQLPARLQDQMLAHLCLKFRTDSEGLQQQETLESLPKAIRSSVSHFLFY
SLVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILVTGAVDLVVLKN
GVEQVVGEVRAGDLCGEIGVLCYRPQLFTVRTKRLCQLLRMNRTTFLNIVQANVGDGTII
MSNLLQHLKEMKNPIMEGVLLETEHMLARGRMDLPLTLCFATLRSDDLLLHHLLKRGLDP
NEADNNGRSALHIAASKGIENCVVLLLDFGADPNSRDSEGNVPLWEAIMGKHESVIQLLV
NNGAKLSAGDVGHFACVAVEQNNLSLLKEIVRYGGDVTLPKINGSSALHVAVCEGNIEIV
KYLLDRGANVDQPDEHNWTPRDLAEQQGHEDIKELFESRVMMRTRSVDPIPEERGVRFLG
RFKSEPTITPASHGVSFLGLDGSLGRSRPRRRSNNFHNSLFGIMSAKQTNEHDVLLSAND
SNVSVMTTKTYAPRVTVCCPEKGDNGGKLILLPQSFKELLQIGSSRYGISQAKVVSKDGA
EIDEIELIRDGDRLVFVSDKDNNIDEAKSSEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400002749
Transcript Infomation

pacid=37448657 locus=PGSC0003DMG400001066 ID=PGSC0003DMT400002749.v4.03 annot-version=v4.03
Sequence

ATGTGTGGTGCAGCACAAGAAATAGAACAATTATCAAGAGAAAGTAGTCATTATAGTCTT
TCTACTGGAATTTTGCCTTCACTTGGTGCAAGAAGTAATAGAAGAGTCAAGCTTAAAAGA
TTTATTATTTCACCTTATGATCGACAATACAGGTTATGGGAGACATTTCTAATTGTGCTG
GTTGTTTACACTGCTTGGGTGTCCCCGTTCGAGTTTGGCTTTCTAGGAAAACCAGAAGGA
CCACTCGCTAAGACGGACAATGTAGTCAATGGATTCTTCGCGATTGATATCATTCTTACC
TTCTTTGTAGCTTTCTTGGATAGAGCCACTTATCTACTTGTCGATGAACACAAAAAGATT
GCTTGGAAGTATATGAGTACTTGGTTCTTATTTGATGTCATATCAACAATCCCTTCAGAA
CTTGCTGTGAAGATTTCCCCAAAACCTTTACGTCAGTATGGATTATTCAATATGCTTCGT
TTGTGGCGTCTAAGAAGAGTTAGTTCATTGTTTGCCAGATTGGAGAAAGATAGGAACTTC
AATTACTTTTGGGTTCGATGTGCAAAGCTTGTTTGTGTCACTCTTTTTGCTGTTCATTGT
GCCGGATGCTTTTATTATCTTATCGCGGCCCATTATCCTGATCCCAAGAAGACATGGATT
GGGGCCTCTATGGATGACTTCCTTAATCAGAGCTTATGGATTCGTTATATCACTTCTATT
TATTGGTCGATAACTACTCTCACTACAGTCGGTTATGGAGATCTGCATCCAGAGAATACG
CGGGAAATGATCTTTGATATCTTCTACATGCTCTTTAACTTGGGATTGACAGCATACTTA
ATAGGAAATATGACTAACTTGGTTGTACACGGGACGAGTAGGACTAGAAAATTTAGAGAT
ACAATTCAAGCTGCTTCGAGCTTTGCACAGAGGAACCAATTGCCTGCTCGTCTCCAAGAT
CAGATGCTTGCACACTTGTGCTTGAAGTTCAGAACAGACTCAGAAGGGCTGCAGCAGCAA
GAGACACTCGAGTCTCTTCCTAAAGCCATCCGTTCAAGTGTTTCACATTTTCTTTTCTAC
TCTTTAGTAGATAAGGTTTACCTGTTTCGTGGAGTGTCAAACGATCTACTCTTCCAGCTG
GTCTCCGAGATGAAGGCAGAGTACTTTCCTCCCAAAGAGGATGTCATTTTGCAGAATGAA
GCACCAACAGACTTCTATATTCTTGTAACAGGAGCTGTGGATCTAGTGGTTCTTAAAAAC
GGAGTTGAACAGGTTGTCGGGGAGGTCAGGGCAGGTGATCTTTGTGGTGAAATCGGGGTT
CTTTGTTATAGGCCTCAACTATTTACAGTACGAACGAAGAGACTGTGCCAGCTACTACGT
ATGAATCGTACCACATTTCTGAATATCGTCCAGGCCAATGTTGGGGACGGGACAATAATC
ATGAGTAATCTCCTTCAGCATTTGAAGGAAATGAAGAATCCAATTATGGAGGGTGTTCTA
CTTGAGACCGAGCATATGCTAGCTCGCGGTAGAATGGACTTGCCTCTCACCCTTTGCTTT
GCAACACTTAGAAGTGATGACTTATTGTTGCATCACTTGTTGAAACGCGGTCTTGATCCA
AATGAAGCAGATAACAATGGAAGATCCGCGTTGCATATCGCTGCGTCTAAAGGCATTGAG
AACTGTGTGGTTCTTCTGCTCGATTTCGGGGCTGATCCCAATAGTAGAGATTCAGAAGGC
AATGTGCCATTGTGGGAGGCTATCATGGGGAAGCACGAGTCAGTTATCCAGTTACTCGTT
AACAACGGTGCTAAACTATCAGCTGGTGATGTGGGACATTTCGCCTGCGTTGCTGTTGAA
CAAAACAACTTGAGTTTGCTCAAGGAGATTGTCCGTTATGGCGGGGATGTCACGCTTCCC
AAGATCAATGGTTCATCAGCTCTCCATGTTGCTGTTTGTGAAGGTAACATAGAAATAGTA
AAGTATCTCTTGGATCGAGGGGCTAACGTTGATCAACCAGACGAACATAATTGGACCCCC
CGGGACCTTGCTGAGCAACAAGGACATGAAGACATCAAAGAACTCTTTGAATCCAGGGTA
ATGATGAGAACTCGATCCGTTGATCCTATCCCCGAGGAACGAGGGGTTAGATTTCTTGGG
AGGTTCAAAAGTGAACCAACAATCACCCCTGCATCCCATGGAGTCTCATTTCTAGGACTA
GACGGATCATTAGGGCGTTCACGTCCTAGACGTAGGTCTAATAACTTCCACAACTCATTA
TTCGGGATAATGTCAGCAAAGCAGACCAATGAGCACGACGTGCTTTTATCTGCAAACGAC
AGTAATGTAAGTGTCATGACAACCAAGACTTATGCTCCCCGAGTGACAGTGTGTTGCCCT
GAGAAAGGAGACAACGGGGGAAAACTCATTTTACTCCCACAGAGTTTTAAAGAGCTACTT
CAAATTGGTTCTAGTAGATATGGTATCTCTCAGGCCAAAGTTGTAAGCAAAGATGGAGCT
GAAATCGACGAAATAGAGTTGATCAGAGATGGTGATCGTTTAGTTTTTGTTAGCGATAAA
GATAACAATATTGATGAAGCTAAATCATCAGAATTGTAG