Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002698
CDS Infomation

pacid=37433039 polypeptide=PGSC0003DMP400001954 locus=PGSC0003DMG401001040 ID=PGSC0003DMT400002698.v4.03 annot-version=v4.03
Sequence

ATGGCCACTATCGTCTCTAGGAGTAGGTGGCACACAATTAACAGCTTCAAACGGCATACT
GCTTTGGAAGTGCATAACCCCGAAGGCGGAGAAGATAAGATCAGCAATTTGCATGATTCC
ATTCTTCTTCACATTCTTTCATATCTTCCTACCAGAGATGTTGTGGGCACATGTATACTT
TCAACAAGGTGGAAGAATCTTTGGACTTGTGTTGAAAACATTGACTTTGATGACTCATTT
CTCTACTCAAGTAGGGTTTTTGGTTATCCGATGAAGGTCACTAGTTTCATGCACTTTGTT
CACAGATTTCTTCAACTTCGAGAAGAATCAGACATAAAAAAGTTTCGCCTTTCCTGCCGT
GTTTGCTTCAGTGCCTCTCATGTTTGTTCATGGCTTTCAACTGTTATTAGGCATAATGTT
CAAGATCTTGATCTCTGTCTTTTTGTAGAAGAACCTTTTATGTTGCCTCAATGTGTTTTC
AGTAGCAAGACACTTACTTCTCTAAAACTTGAAATGAATTGTGTTCTTGAACTACCTACT
AGTACTTGTTTTCCTTTCCTTAAGACCTTGCACCTATGTCTTGTCACATTTCGGGATGAT
AGCTCAACCCAGAGGCTGTTATCTAGCTGCCCTATGCTTCGGGAGTTGGCTATATTAGAT
TGTGAATGGATGAACTTGAAGCAAGTTGCAATTTCAATCTCTTCATTAAAGAGTTTGATA
ATCGATGATTTGCCTTTCTTTGGCTCCACTGATGATCTAAATGGCTGCAAAATCAAGATT
GATGCAGCAAGTCTTACTTTCCTTAAGTACAGTGGTTATCTCTCAAATGAGATATGTTTG
TATAATCTATCTTCCTCAGTCAATGCATCAATTCACATCCCCATTCTGTATGAGAAGAGA
AATCAAATTGCTTTTCGTGCTGTTAAGCTCTTTAGAGGGCTACACAAGATTAGTGCTGCC
AGAATATCTAACAGGGCTATTGAGTCTCTCTTCATCGCAGATATAGAGAAAGACCAACTT
CCAATATTTTATAACTTGACGCATTTGGAGTTGAGTATGGAACTTGAAAATCATTCCATT
GGACCATTGAAGGAACTGCTCCAATGTCTGCCAAAGTTGCAATCGCTTCATTTTTCTGAG
GGACTTGACCCCTGCATGCACCTTTGTGAAGATGACTGGAACTTGAGATCTGTGCCACCC
TGTTTCTTGTCTAGTCTCAAGACAGTGAAATACAGCAATTTTCATGGTAATGATACAGAG
ATTTCTTTTTTAAGAAATTTGCTGGAAATTGCAATAGTTTTGGAGAAGCTGAACATAGTT
TGTTCAAAGAGACCTTTTGGGGATCTAAAGAAGCAAAAGGAAGTTGAAGATCAACTGCGG
AGTGGGCACGGAGGATCAGTGTCTTGTGCTATCAAGTTTATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400001954
PEP Infomation

pacid=37433039 transcript=PGSC0003DMT400002698 locus=PGSC0003DMG401001040 ID=PGSC0003DMT400002698.v4.03 annot-version=v4.03
Sequence

MATIVSRSRWHTINSFKRHTALEVHNPEGGEDKISNLHDSILLHILSYLPTRDVVGTCIL
STRWKNLWTCVENIDFDDSFLYSSRVFGYPMKVTSFMHFVHRFLQLREESDIKKFRLSCR
VCFSASHVCSWLSTVIRHNVQDLDLCLFVEEPFMLPQCVFSSKTLTSLKLEMNCVLELPT
STCFPFLKTLHLCLVTFRDDSSTQRLLSSCPMLRELAILDCEWMNLKQVAISISSLKSLI
IDDLPFFGSTDDLNGCKIKIDAASLTFLKYSGYLSNEICLYNLSSSVNASIHIPILYEKR
NQIAFRAVKLFRGLHKISAARISNRAIESLFIADIEKDQLPIFYNLTHLELSMELENHSI
GPLKELLQCLPKLQSLHFSEGLDPCMHLCEDDWNLRSVPPCFLSSLKTVKYSNFHGNDTE
ISFLRNLLEIAIVLEKLNIVCSKRPFGDLKKQKEVEDQLRSGHGGSVSCAIKFM*

Transcript Sequence

Transcript ID

PGSC0003DMT400002698
Transcript Infomation

pacid=37433039 locus=PGSC0003DMG401001040 ID=PGSC0003DMT400002698.v4.03 annot-version=v4.03
Sequence

ATGGCCACTATCGTCTCTAGGAGTAGGTGGCACACAATTAACAGCTTCAAACGGCATACT
GCTTTGGAAGTGCATAACCCCGAAGGCGGAGAAGATAAGATCAGCAATTTGCATGATTCC
ATTCTTCTTCACATTCTTTCATATCTTCCTACCAGAGATGTTGTGGGCACATGTATACTT
TCAACAAGGTGGAAGAATCTTTGGACTTGTGTTGAAAACATTGACTTTGATGACTCATTT
CTCTACTCAAGTAGGGTTTTTGGTTATCCGATGAAGGTCACTAGTTTCATGCACTTTGTT
CACAGATTTCTTCAACTTCGAGAAGAATCAGACATAAAAAAGTTTCGCCTTTCCTGCCGT
GTTTGCTTCAGTGCCTCTCATGTTTGTTCATGGCTTTCAACTGTTATTAGGCATAATGTT
CAAGATCTTGATCTCTGTCTTTTTGTAGAAGAACCTTTTATGTTGCCTCAATGTGTTTTC
AGTAGCAAGACACTTACTTCTCTAAAACTTGAAATGAATTGTGTTCTTGAACTACCTACT
AGTACTTGTTTTCCTTTCCTTAAGACCTTGCACCTATGTCTTGTCACATTTCGGGATGAT
AGCTCAACCCAGAGGCTGTTATCTAGCTGCCCTATGCTTCGGGAGTTGGCTATATTAGAT
TGTGAATGGATGAACTTGAAGCAAGTTGCAATTTCAATCTCTTCATTAAAGAGTTTGATA
ATCGATGATTTGCCTTTCTTTGGCTCCACTGATGATCTAAATGGCTGCAAAATCAAGATT
GATGCAGCAAGTCTTACTTTCCTTAAGTACAGTGGTTATCTCTCAAATGAGATATGTTTG
TATAATCTATCTTCCTCAGTCAATGCATCAATTCACATCCCCATTCTGTATGAGAAGAGA
AATCAAATTGCTTTTCGTGCTGTTAAGCTCTTTAGAGGGCTACACAAGATTAGTGCTGCC
AGAATATCTAACAGGGCTATTGAGTCTCTCTTCATCGCAGATATAGAGAAAGACCAACTT
CCAATATTTTATAACTTGACGCATTTGGAGTTGAGTATGGAACTTGAAAATCATTCCATT
GGACCATTGAAGGAACTGCTCCAATGTCTGCCAAAGTTGCAATCGCTTCATTTTTCTGAG
GGACTTGACCCCTGCATGCACCTTTGTGAAGATGACTGGAACTTGAGATCTGTGCCACCC
TGTTTCTTGTCTAGTCTCAAGACAGTGAAATACAGCAATTTTCATGGTAATGATACAGAG
ATTTCTTTTTTAAGAAATTTGCTGGAAATTGCAATAGTTTTGGAGAAGCTGAACATAGTT
TGTTCAAAGAGACCTTTTGGGGATCTAAAGAAGCAAAAGGAAGTTGAAGATCAACTGCGG
AGTGGGCACGGAGGATCAGTGTCTTGTGCTATCAAGTTTATGTAA