Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002678
CDS Infomation

pacid=37434555 polypeptide=PGSC0003DMP400001944 locus=PGSC0003DMG400001032 ID=PGSC0003DMT400002678.v4.03 annot-version=v4.03
Sequence

ATGCAAATTCCATGGAGGAATATCTCTTGGGTCTTATTAGTTTTGTTTGCGTACAATTGT
CAAACATGTAACGGGCAGGATTACGGCGGAGAGGAAAAACCGGCAGCACCGCCACCGGAG
CAAGAGACTTGCGATGGAATCTTCATTACCTATAATTTCGATGGACGAGAAAAGATATAT
CCATTAGTGAAGAATGTATCTGCACAGGGATGGTCATTTAAGTCCATGTTAACGGTGTTG
AATGCAGGAACTTTTGAGCTGAAATCATGGCAAGTTTTCGTCGGATTTCAGCATAAAGAG
CTTTTAGTATCGGCGGACGGTGCGGTTGCAATTGACGGCGATGGATTTCCGGTACGAGTG
GGTAAAAATGGTACAACATTGGCTGGGTATCCACAATCCGATTTGAAAACGGCGATTGAT
ACCGCCGGTGATTTTACTCAGATGTCAGCTCAAATCAATATTAAGGGGACGCAATTTGGT
CTTAAAGAGAAAACAAATCCAATGCCTTCAACAATCAAGCTCGTCAATGAAGGATACAAA
TGCCCTGCTCCTAAGCGCTATAAAACTTACATGCATGTTTGCTGCAAGAGGGATCCTAAA
TTCAAGCCCAAGAAGGTGATCACCAAGTTCATGCCTCGTCGTTATGGAGACCTCTCCATA
ACTTACGATGTTCTATCAGCATTCGCGAATAGGTACCAAGCTCAAGTCACAATTGACAAT
CTTAATCCTTTGGGTCGTCTTGATCATTGGAACTTAACGTGGGAGTGGATGAGGAACGAG
TTCATTAACACCATTAAAGGTGCGCATACTCACAAAATAGATCCTTCTGAGTGTATTTAC
GGACCACAAGGACAATATTACAAGGATTTCGATTTCACTCCTGTGATAAATTGCCAAAAG
AAACCAATCATTTCCGATTTACCCAAGGAGAAAGCAAACGATGACAAAATTGGGAAGTTG
CCTTATTGTTGCAGAAACGGAACTCTTTTGTCACCTATCATGAATGAAACAGAAGCAAGG
TCCATTTTCCAGATGGAAGTTTTCAAACTTCCCCCTGATTTAAACAGAACCGCGTTAAAT
CCACCTCAAAACTGGAAAATCGTGGGAACAATTAACCCGTCTTATACATGTGGACCGCCA
GTCAGAATTGATCCATCAGCATTCCCGGATCCTAAAGGAATCGGAATTGCTACTGCTGTT
GCTAGCTGGCAAATTACTTGTAACATTACTCGTCCTAAGCCCAAAGCAGCCAAATGTTGT
GTTTCTTTCTCAGCTTATTATGCTGAATCTGTTATCCCCTGCAACACTTGTGCTTGTGGC
TGTGAACAGACGTCTAAATGTGACGCGAACAAAAAGCCACTACTTCTCCCTCCAGAAGCG
CTACTCGTCCCTTTTGAAAATAGGGACCTAATGGCGAAAGCTTGGAGCAATATCAAACAT
CTTGGTCCTATGCCTAAGAAACTACCTTGTCCTGATAATTGTGGAGTGAGCATCAATTGG
CATGTTGATAGTAACTACAAGACAGGATGGACTGCGCGTATAACGCTCTTCAACTGGGGA
AACAACGCGTTTGAAAACTGGTTTTCCGCGATCCAAATGAAGAAAGATGTAGCTAATGGC
TATGAAAACGTGTACTCATTTAACGGTACAAAGTTACCTAAAGAAAAGAGCAACACTATA
TTTATGCAAGGTTTACCTGGTTTGAAATTCTTGGTTGGAGAGGTTAATGGGACTAATCCT
AATAAGGATCCAAGAGTACCTGGAAAACAACAATCAATTATTTCATTTTTGAAGAAGAAT
ACACCACATATTAACGTCGATGGTGGCGATGGATTCCCTTCTAAGGTGTTCTTCAATGGG
GAAGAATGCGCGCTTCCACCAGAGTTTCCTAAAAACACTGCAGCATTCAAAACCAAATTT
GGTGTTTTACCAGCAGTTTTGCTTGCCCTCTTAACTTTCCTTCTTTTGACAGATTGGTTA
CACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400001944
PEP Infomation

pacid=37434555 transcript=PGSC0003DMT400002678 locus=PGSC0003DMG400001032 ID=PGSC0003DMT400002678.v4.03 annot-version=v4.03
Sequence

MQIPWRNISWVLLVLFAYNCQTCNGQDYGGEEKPAAPPPEQETCDGIFITYNFDGREKIY
PLVKNVSAQGWSFKSMLTVLNAGTFELKSWQVFVGFQHKELLVSADGAVAIDGDGFPVRV
GKNGTTLAGYPQSDLKTAIDTAGDFTQMSAQINIKGTQFGLKEKTNPMPSTIKLVNEGYK
CPAPKRYKTYMHVCCKRDPKFKPKKVITKFMPRRYGDLSITYDVLSAFANRYQAQVTIDN
LNPLGRLDHWNLTWEWMRNEFINTIKGAHTHKIDPSECIYGPQGQYYKDFDFTPVINCQK
KPIISDLPKEKANDDKIGKLPYCCRNGTLLSPIMNETEARSIFQMEVFKLPPDLNRTALN
PPQNWKIVGTINPSYTCGPPVRIDPSAFPDPKGIGIATAVASWQITCNITRPKPKAAKCC
VSFSAYYAESVIPCNTCACGCEQTSKCDANKKPLLLPPEALLVPFENRDLMAKAWSNIKH
LGPMPKKLPCPDNCGVSINWHVDSNYKTGWTARITLFNWGNNAFENWFSAIQMKKDVANG
YENVYSFNGTKLPKEKSNTIFMQGLPGLKFLVGEVNGTNPNKDPRVPGKQQSIISFLKKN
TPHINVDGGDGFPSKVFFNGEECALPPEFPKNTAAFKTKFGVLPAVLLALLTFLLLTDWL
H*

Transcript Sequence

Transcript ID

PGSC0003DMT400002678
Transcript Infomation

pacid=37434555 locus=PGSC0003DMG400001032 ID=PGSC0003DMT400002678.v4.03 annot-version=v4.03
Sequence

ATGCAAATTCCATGGAGGAATATCTCTTGGGTCTTATTAGTTTTGTTTGCGTACAATTGT
CAAACATGTAACGGGCAGGATTACGGCGGAGAGGAAAAACCGGCAGCACCGCCACCGGAG
CAAGAGACTTGCGATGGAATCTTCATTACCTATAATTTCGATGGACGAGAAAAGATATAT
CCATTAGTGAAGAATGTATCTGCACAGGGATGGTCATTTAAGTCCATGTTAACGGTGTTG
AATGCAGGAACTTTTGAGCTGAAATCATGGCAAGTTTTCGTCGGATTTCAGCATAAAGAG
CTTTTAGTATCGGCGGACGGTGCGGTTGCAATTGACGGCGATGGATTTCCGGTACGAGTG
GGTAAAAATGGTACAACATTGGCTGGGTATCCACAATCCGATTTGAAAACGGCGATTGAT
ACCGCCGGTGATTTTACTCAGATGTCAGCTCAAATCAATATTAAGGGGACGCAATTTGGT
CTTAAAGAGAAAACAAATCCAATGCCTTCAACAATCAAGCTCGTCAATGAAGGATACAAA
TGCCCTGCTCCTAAGCGCTATAAAACTTACATGCATGTTTGCTGCAAGAGGGATCCTAAA
TTCAAGCCCAAGAAGGTGATCACCAAGTTCATGCCTCGTCGTTATGGAGACCTCTCCATA
ACTTACGATGTTCTATCAGCATTCGCGAATAGGTACCAAGCTCAAGTCACAATTGACAAT
CTTAATCCTTTGGGTCGTCTTGATCATTGGAACTTAACGTGGGAGTGGATGAGGAACGAG
TTCATTAACACCATTAAAGGTGCGCATACTCACAAAATAGATCCTTCTGAGTGTATTTAC
GGACCACAAGGACAATATTACAAGGATTTCGATTTCACTCCTGTGATAAATTGCCAAAAG
AAACCAATCATTTCCGATTTACCCAAGGAGAAAGCAAACGATGACAAAATTGGGAAGTTG
CCTTATTGTTGCAGAAACGGAACTCTTTTGTCACCTATCATGAATGAAACAGAAGCAAGG
TCCATTTTCCAGATGGAAGTTTTCAAACTTCCCCCTGATTTAAACAGAACCGCGTTAAAT
CCACCTCAAAACTGGAAAATCGTGGGAACAATTAACCCGTCTTATACATGTGGACCGCCA
GTCAGAATTGATCCATCAGCATTCCCGGATCCTAAAGGAATCGGAATTGCTACTGCTGTT
GCTAGCTGGCAAATTACTTGTAACATTACTCGTCCTAAGCCCAAAGCAGCCAAATGTTGT
GTTTCTTTCTCAGCTTATTATGCTGAATCTGTTATCCCCTGCAACACTTGTGCTTGTGGC
TGTGAACAGACGTCTAAATGTGACGCGAACAAAAAGCCACTACTTCTCCCTCCAGAAGCG
CTACTCGTCCCTTTTGAAAATAGGGACCTAATGGCGAAAGCTTGGAGCAATATCAAACAT
CTTGGTCCTATGCCTAAGAAACTACCTTGTCCTGATAATTGTGGAGTGAGCATCAATTGG
CATGTTGATAGTAACTACAAGACAGGATGGACTGCGCGTATAACGCTCTTCAACTGGGGA
AACAACGCGTTTGAAAACTGGTTTTCCGCGATCCAAATGAAGAAAGATGTAGCTAATGGC
TATGAAAACGTGTACTCATTTAACGGTACAAAGTTACCTAAAGAAAAGAGCAACACTATA
TTTATGCAAGGTTTACCTGGTTTGAAATTCTTGGTTGGAGAGGTTAATGGGACTAATCCT
AATAAGGATCCAAGAGTACCTGGAAAACAACAATCAATTATTTCATTTTTGAAGAAGAAT
ACACCACATATTAACGTCGATGGTGGCGATGGATTCCCTTCTAAGGTGTTCTTCAATGGG
GAAGAATGCGCGCTTCCACCAGAGTTTCCTAAAAACACTGCAGCATTCAAAACCAAATTT
GGTGTTTTACCAGCAGTTTTGCTTGCCCTCTTAACTTTCCTTCTTTTGACAGATTGGTTA
CACTGA