Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002592
CDS Infomation

pacid=37464801 polypeptide=PGSC0003DMP400001885 locus=PGSC0003DMG400000994 ID=PGSC0003DMT400002592.v4.03 annot-version=v4.03
Sequence

ATGGGAAACACTTGTGTAGGACCAAGTATTTCTAAAAATGGAATCTTTCAATCAATGTCA
GCAGCAATGTGGCGATCCCGGTCGCCGGATGATAGTGCTTCCACTGTCAATAATGATGAA
AGTGTTAGAGTAGAAACACCAACTTCTGCTAAAGAAACTGAATCACCTTTGCCAGTTCAA
GATAAGCCACCAGAACAGATGACAATGCCTAAGTTAGAAGAGAAAGAGGAAGAAAAACCG
AAAAAGCCCAAAAAGCCGGCTGAAATGAAGAGGGTGTCTAGTGCTGGACTTAGGACTGAT
TCTGTGTTACAGAAGAAAACTGGGAATTTAAAGGAGTTTTTTAGTATAGGAAAGAAATTA
GGACAAGGACAATTTGGAACTACATTTCTTTGTACTGAAAAAGCAACGGGGAAACGATAT
GCTTGCAAATCGATTGCTAAGAGGAAGTTGTTAACAGATGATGATGTGGAAGATGTTAGA
AGGGAAGTCCAGATAATGCACCACTTGGCAGGACATCCTCATGTTATATCGATAAAAGGG
GCTTATGAGGATGCTGTAGCTGTTCACCTTGTTATGGAGTATTGTGCTGGGGGTGAGCTT
TTCGATAGGATTATTCAACGAGGGCACTATACAGAAAGAAAAGCAGCTGAGCTCACCCGG
ACTATTGTTGGAGTTGTAGAAGCTTGTCATTCTCTTGGTGTCATGCATCGTGATCTTAAG
CCTGAGAATTTTCTTTTTGTTGATCAGACGGAGGAGTCACTTCTCAAAACAATTGACTTT
GGGTTATCAATATTCTTCAAACCAGGCGACAAATTTACTGATGTTGTTGGCAGTCCGTAT
TATGTTGCACCAGAAGTTCTCCGAAAACGTTATGGTCCTGAAGCTGATGTCTGGAGTGCT
GGTGTAATTATCTACATCTTGTTAAGTGGAGTACCTCCTTTCTGGGCTGAAAATGAGCAA
GGAATATTTGAACAAGTCCTGCACGGTGATCTTGACTTCACGTCAGACCCATGGCCAAGT
ATTTCAGAAGATGCCAAAGACTTGATGAGGAGAATGCTTATTCGAGATCCAAGAAAACGT
TTAACTGCACATGAAGTTTTATGCCATCCTTGGGTTCAAGTTGATGGTGTGGCTCCTGAT
AAGCCTCTGGATTCTGCAGTTCTCAGTAGAATGAAGCAATTTTCTGCAATGAACAAGCTC
AAGAAAATGGCTTTGAGAGTCATTGCTGAAAGCCTATCTGAAGAAGAAATTGCTGGTCTT
AAAGAAATGTTCAGGATGATAGACACAGACAATAGTGGTCAAATAACTTTTGAGGAGCTC
AAAGATGGATTAAAAAGATTTGGCTCTAATCTGAAGGAGTCTGAGATCTATGATCTTATG
CAAGCAGCTGATGTTGATAACAGTGGAACAATTGATTATGGTGAATTTATAGCTGCGACA
TTACATCTTAACAAAATTGAACGAGACGATCATCTTTTTGCTGCTTTCTCTTACTTTGAT
AAAGATGGAAGCGGCTACATCACTGCAGACGAGCTTCAACATGCTTGTGAAGAATTTGGC
ATTGGAGATGTTCGCATGGAAGAAATGATTAGAGAAGCTGACCAGGACAATGACGGTCGC
ATTGATTACAATGAGTTTGTTGCTATGATGCAAAAGGGAAATCCAGTGCTTGGTGGTGGC
AAGAAAGGTCTAGAGCAAAGTTTCAGCATTGGATTCAGAGAAGCACTAAAACTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400001885
PEP Infomation

pacid=37464801 transcript=PGSC0003DMT400002592 locus=PGSC0003DMG400000994 ID=PGSC0003DMT400002592.v4.03 annot-version=v4.03
Sequence

MGNTCVGPSISKNGIFQSMSAAMWRSRSPDDSASTVNNDESVRVETPTSAKETESPLPVQ
DKPPEQMTMPKLEEKEEEKPKKPKKPAEMKRVSSAGLRTDSVLQKKTGNLKEFFSIGKKL
GQGQFGTTFLCTEKATGKRYACKSIAKRKLLTDDDVEDVRREVQIMHHLAGHPHVISIKG
AYEDAVAVHLVMEYCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLK
PENFLFVDQTEESLLKTIDFGLSIFFKPGDKFTDVVGSPYYVAPEVLRKRYGPEADVWSA
GVIIYILLSGVPPFWAENEQGIFEQVLHGDLDFTSDPWPSISEDAKDLMRRMLIRDPRKR
LTAHEVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNKLKKMALRVIAESLSEEEIAGL
KEMFRMIDTDNSGQITFEELKDGLKRFGSNLKESEIYDLMQAADVDNSGTIDYGEFIAAT
LHLNKIERDDHLFAAFSYFDKDGSGYITADELQHACEEFGIGDVRMEEMIREADQDNDGR
IDYNEFVAMMQKGNPVLGGGKKGLEQSFSIGFREALKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400002592
Transcript Infomation

pacid=37464801 locus=PGSC0003DMG400000994 ID=PGSC0003DMT400002592.v4.03 annot-version=v4.03
Sequence

ATGGGAAACACTTGTGTAGGACCAAGTATTTCTAAAAATGGAATCTTTCAATCAATGTCA
GCAGCAATGTGGCGATCCCGGTCGCCGGATGATAGTGCTTCCACTGTCAATAATGATGAA
AGTGTTAGAGTAGAAACACCAACTTCTGCTAAAGAAACTGAATCACCTTTGCCAGTTCAA
GATAAGCCACCAGAACAGATGACAATGCCTAAGTTAGAAGAGAAAGAGGAAGAAAAACCG
AAAAAGCCCAAAAAGCCGGCTGAAATGAAGAGGGTGTCTAGTGCTGGACTTAGGACTGAT
TCTGTGTTACAGAAGAAAACTGGGAATTTAAAGGAGTTTTTTAGTATAGGAAAGAAATTA
GGACAAGGACAATTTGGAACTACATTTCTTTGTACTGAAAAAGCAACGGGGAAACGATAT
GCTTGCAAATCGATTGCTAAGAGGAAGTTGTTAACAGATGATGATGTGGAAGATGTTAGA
AGGGAAGTCCAGATAATGCACCACTTGGCAGGACATCCTCATGTTATATCGATAAAAGGG
GCTTATGAGGATGCTGTAGCTGTTCACCTTGTTATGGAGTATTGTGCTGGGGGTGAGCTT
TTCGATAGGATTATTCAACGAGGGCACTATACAGAAAGAAAAGCAGCTGAGCTCACCCGG
ACTATTGTTGGAGTTGTAGAAGCTTGTCATTCTCTTGGTGTCATGCATCGTGATCTTAAG
CCTGAGAATTTTCTTTTTGTTGATCAGACGGAGGAGTCACTTCTCAAAACAATTGACTTT
GGGTTATCAATATTCTTCAAACCAGGCGACAAATTTACTGATGTTGTTGGCAGTCCGTAT
TATGTTGCACCAGAAGTTCTCCGAAAACGTTATGGTCCTGAAGCTGATGTCTGGAGTGCT
GGTGTAATTATCTACATCTTGTTAAGTGGAGTACCTCCTTTCTGGGCTGAAAATGAGCAA
GGAATATTTGAACAAGTCCTGCACGGTGATCTTGACTTCACGTCAGACCCATGGCCAAGT
ATTTCAGAAGATGCCAAAGACTTGATGAGGAGAATGCTTATTCGAGATCCAAGAAAACGT
TTAACTGCACATGAAGTTTTATGCCATCCTTGGGTTCAAGTTGATGGTGTGGCTCCTGAT
AAGCCTCTGGATTCTGCAGTTCTCAGTAGAATGAAGCAATTTTCTGCAATGAACAAGCTC
AAGAAAATGGCTTTGAGAGTCATTGCTGAAAGCCTATCTGAAGAAGAAATTGCTGGTCTT
AAAGAAATGTTCAGGATGATAGACACAGACAATAGTGGTCAAATAACTTTTGAGGAGCTC
AAAGATGGATTAAAAAGATTTGGCTCTAATCTGAAGGAGTCTGAGATCTATGATCTTATG
CAAGCAGCTGATGTTGATAACAGTGGAACAATTGATTATGGTGAATTTATAGCTGCGACA
TTACATCTTAACAAAATTGAACGAGACGATCATCTTTTTGCTGCTTTCTCTTACTTTGAT
AAAGATGGAAGCGGCTACATCACTGCAGACGAGCTTCAACATGCTTGTGAAGAATTTGGC
ATTGGAGATGTTCGCATGGAAGAAATGATTAGAGAAGCTGACCAGGACAATGACGGTCGC
ATTGATTACAATGAGTTTGTTGCTATGATGCAAAAGGGAAATCCAGTGCTTGGTGGTGGC
AAGAAAGGTCTAGAGCAAAGTTTCAGCATTGGATTCAGAGAAGCACTAAAACTATAG