Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400002590
CDS Infomation

pacid=37466768 polypeptide=PGSC0003DMP400001883 locus=PGSC0003DMG400000993 ID=PGSC0003DMT400002590.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGTTTATGCAGAATCTCGCGAGAACGAAGAACATTGGAAAAAGGTCTAAAAAA
AAGTATTTGGAAGATGCACTTTACAAAAATCTGTTCAAGGAAGGAGGCGAAGAGAATCAT
GTTAGGAAAAATCTGAATCAATTTTTGAAATCACACAAAAGTGCTTTCAAATGGGAAGTT
GGAAAATCCCTCAAAGTATTACGCCAACGCAAGCTTTACGCTCCAGCACTCAAGTTATCA
GAAACAATGGAAAAAAGGGGCATGAACAAGACTGTTAGTGATCAAGCTATACATATAGAT
ATTGTTGCCAAGAGTAAAGGGATTGAAGCAGGAGAGAGCTATTTTTTGAATCTCCCAGAG
ACATCGAAAGATCTTCTTACTTATTGTGCCCTTCTGAACTGCTACTGCAAAGAATTAATG
ACTGAAAAAGCTGAGGCTTTGATGGAGAAAGTGAAAGAACTTAACTTAAGTTTAAGCTCC
ATGCCTTACAACAGCTTGATGACTCTTTACACAAAAACTGGGCACCCAGAAAAAATCCCC
GCCATTATCCAAGAAATGAAGGCCAATGATGTTATGCCAGATTGTTATACCTACAATGTC
TGGATGAGGGCTCTTTCTTCTGTGAATGATATTTCTGGGGTTGAGAGGGTTATTGATGAA
ATGAAGAGGGATGGCCGTGTTGCTGAAGATTGGACTACTTATAGTAATTTGGCATCGATC
TATGCAGATGCTGGCTTAACTGACAAAGCAGTGAAGGCACTCAAGGAACTGGAGAAGAAA
AATGCATGCCGCAATATTACTGCTTACCAGTTTCTGATCACATTGTATGGTCGTGTTGGA
AATTTGCTTGAAGTATATCGGGTATGGCGTTCTTTGAGGCTTGCTTTTCCCAGAACAGCA
AACATAAGCTATCTTAACATGATCCAAGTTTTAGTTAACTTGAATGACATACCGGGTGCT
GAGAAATGTTTCAAGGAATGGGAGTCTGGATGCCCAACTTATGACATACGTATAGCAAAT
GTTCTTATAGGAGTTTACACGAAACAAAGTTCCCTGGAGAAAGCTGAACAGCTCAAGGAA
CGGGCACGAAGGAGTGGAGCTAAGCCCAATGCTAAGACATGGGAGATCTTCATGGACTAT
TATCTGCAAAACGGGGATATCAAATCAGCAATTGATTGTGTTGACAAAGCAGTTTCAATT
GGAAGGGGTGATGGTAGCAAGTGGTTTCCATCATCTGCCATCGTAACAAAATTCATGAGT
CATTTTGAACAAAATAAAGATGTCGCTGGTGCAGAACACTTTGTGGAAATTTTGAAGAAG
GCTAAGGATGAGTTGGGGGTTGACATATTTGAATCTTTGTTACGAACTTATATAGCTTCT
GAAAAAACAAGTCCTATCATGCGTCGGCGTATTAAAATGGAAAGCATAGAGCTGACTGAT
GAAGGTAAAAGATTGCTGGATGCTGTTTCCGTGGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400001883
PEP Infomation

pacid=37466768 transcript=PGSC0003DMT400002590 locus=PGSC0003DMG400000993 ID=PGSC0003DMT400002590.v4.03 annot-version=v4.03
Sequence

MASFMQNLARTKNIGKRSKKKYLEDALYKNLFKEGGEENHVRKNLNQFLKSHKSAFKWEV
GKSLKVLRQRKLYAPALKLSETMEKRGMNKTVSDQAIHIDIVAKSKGIEAGESYFLNLPE
TSKDLLTYCALLNCYCKELMTEKAEALMEKVKELNLSLSSMPYNSLMTLYTKTGHPEKIP
AIIQEMKANDVMPDCYTYNVWMRALSSVNDISGVERVIDEMKRDGRVAEDWTTYSNLASI
YADAGLTDKAVKALKELEKKNACRNITAYQFLITLYGRVGNLLEVYRVWRSLRLAFPRTA
NISYLNMIQVLVNLNDIPGAEKCFKEWESGCPTYDIRIANVLIGVYTKQSSLEKAEQLKE
RARRSGAKPNAKTWEIFMDYYLQNGDIKSAIDCVDKAVSIGRGDGSKWFPSSAIVTKFMS
HFEQNKDVAGAEHFVEILKKAKDELGVDIFESLLRTYIASEKTSPIMRRRIKMESIELTD
EGKRLLDAVSVE*

Transcript Sequence

Transcript ID

PGSC0003DMT400002590
Transcript Infomation

pacid=37466768 locus=PGSC0003DMG400000993 ID=PGSC0003DMT400002590.v4.03 annot-version=v4.03
Sequence

ATGGCGTCGTTTATGCAGAATCTCGCGAGAACGAAGAACATTGGAAAAAGGTCTAAAAAA
AAGTATTTGGAAGATGCACTTTACAAAAATCTGTTCAAGGAAGGAGGCGAAGAGAATCAT
GTTAGGAAAAATCTGAATCAATTTTTGAAATCACACAAAAGTGCTTTCAAATGGGAAGTT
GGAAAATCCCTCAAAGTATTACGCCAACGCAAGCTTTACGCTCCAGCACTCAAGTTATCA
GAAACAATGGAAAAAAGGGGCATGAACAAGACTGTTAGTGATCAAGCTATACATATAGAT
ATTGTTGCCAAGAGTAAAGGGATTGAAGCAGGAGAGAGCTATTTTTTGAATCTCCCAGAG
ACATCGAAAGATCTTCTTACTTATTGTGCCCTTCTGAACTGCTACTGCAAAGAATTAATG
ACTGAAAAAGCTGAGGCTTTGATGGAGAAAGTGAAAGAACTTAACTTAAGTTTAAGCTCC
ATGCCTTACAACAGCTTGATGACTCTTTACACAAAAACTGGGCACCCAGAAAAAATCCCC
GCCATTATCCAAGAAATGAAGGCCAATGATGTTATGCCAGATTGTTATACCTACAATGTC
TGGATGAGGGCTCTTTCTTCTGTGAATGATATTTCTGGGGTTGAGAGGGTTATTGATGAA
ATGAAGAGGGATGGCCGTGTTGCTGAAGATTGGACTACTTATAGTAATTTGGCATCGATC
TATGCAGATGCTGGCTTAACTGACAAAGCAGTGAAGGCACTCAAGGAACTGGAGAAGAAA
AATGCATGCCGCAATATTACTGCTTACCAGTTTCTGATCACATTGTATGGTCGTGTTGGA
AATTTGCTTGAAGTATATCGGGTATGGCGTTCTTTGAGGCTTGCTTTTCCCAGAACAGCA
AACATAAGCTATCTTAACATGATCCAAGTTTTAGTTAACTTGAATGACATACCGGGTGCT
GAGAAATGTTTCAAGGAATGGGAGTCTGGATGCCCAACTTATGACATACGTATAGCAAAT
GTTCTTATAGGAGTTTACACGAAACAAAGTTCCCTGGAGAAAGCTGAACAGCTCAAGGAA
CGGGCACGAAGGAGTGGAGCTAAGCCCAATGCTAAGACATGGGAGATCTTCATGGACTAT
TATCTGCAAAACGGGGATATCAAATCAGCAATTGATTGTGTTGACAAAGCAGTTTCAATT
GGAAGGGGTGATGGTAGCAAGTGGTTTCCATCATCTGCCATCGTAACAAAATTCATGAGT
CATTTTGAACAAAATAAAGATGTCGCTGGTGCAGAACACTTTGTGGAAATTTTGAAGAAG
GCTAAGGATGAGTTGGGGGTTGACATATTTGAATCTTTGTTACGAACTTATATAGCTTCT
GAAAAAACAAGTCCTATCATGCGTCGGCGTATTAAAATGGAAAGCATAGAGCTGACTGAT
GAAGGTAAAAGATTGCTGGATGCTGTTTCCGTGGAGTGA